RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 UBR3Q6ZT12 1888 aa23.3■■□□□ 1.32
GPHN-211ENST00000556020 ERVV-2B6SEH9 535 aa23.3■■□□□ 1.32
GPHN-211ENST00000556020 LINC00116Q8NCU8 138 aa23.3■■□□□ 1.32
GPHN-211ENST00000556020 KDRP35968 1356 aa23.29■■□□□ 1.32
GPHN-211ENST00000556020 HMOX1P09601 288 aa23.29■■□□□ 1.32
GPHN-211ENST00000556020 CABP4P57796 275 aa23.29■■□□□ 1.32
GPHN-211ENST00000556020 FLAD1Q8NFF5 587 aa23.29■■□□□ 1.32
GPHN-211ENST00000556020 MAP3K5Q99683 1374 aa23.28■■□□□ 1.32
GPHN-211ENST00000556020 ITPK1Q13572 414 aa23.28■■□□□ 1.32
GPHN-211ENST00000556020 AMIGO3Q86WK7 504 aa23.28■■□□□ 1.32
GPHN-211ENST00000556020 RBM42Q9BTD8 480 aaKnown RBP23.28■■□□□ 1.32
GPHN-211ENST00000556020 DIAPH1O60610 1272 aaKnown RBP23.26■■□□□ 1.31
GPHN-211ENST00000556020 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.25■■□□□ 1.31
GPHN-211ENST00000556020 GNPATO15228 680 aa23.25■■□□□ 1.31
GPHN-211ENST00000556020 PELP1Q8IZL8 1130 aaKnown RBP23.25■■□□□ 1.31
GPHN-211ENST00000556020 SCN11AQ9UI33 1791 aa23.24■■□□□ 1.31
GPHN-211ENST00000556020 NLGN2Q8NFZ4 835 aa23.23■■□□□ 1.31
GPHN-211ENST00000556020 NPC1L1Q9UHC9 1359 aa23.23■■□□□ 1.31
GPHN-211ENST00000556020 GPR162Q16538 588 aa23.22■■□□□ 1.31
GPHN-211ENST00000556020 NFATC2IPQ8NCF5 419 aa23.22■■□□□ 1.31
GPHN-211ENST00000556020 SLC4A9Q96Q91 983 aa23.22■■□□□ 1.31
GPHN-211ENST00000556020 VIRMAQ69YN4 1812 aaKnown RBP23.22■■□□□ 1.31
GPHN-211ENST00000556020 SSFA2P28290 1259 aa23.21■■□□□ 1.31
GPHN-211ENST00000556020 U2SURPO15042 1029 aaKnown RBP23.2■■□□□ 1.3
GPHN-211ENST00000556020 PTCD1O75127 700 aaKnown RBP23.2■■□□□ 1.3
GPHN-211ENST00000556020 AKAP4Q5JQC9 854 aa23.2■■□□□ 1.3
GPHN-211ENST00000556020 COL5A3P25940 1745 aaPredicted RBP23.19■■□□□ 1.3
GPHN-211ENST00000556020 COL3A1P02461 1466 aaPredicted RBP23.19■■□□□ 1.3
GPHN-211ENST00000556020 ZNF831Q5JPB2 1677 aa23.19■■□□□ 1.3
GPHN-211ENST00000556020 CHD4Q14839 1912 aa23.18■■□□□ 1.3
GPHN-211ENST00000556020 MTHFSDQ2M296 383 aaKnown RBP23.17■■□□□ 1.3
GPHN-211ENST00000556020 LGR6Q9HBX8 967 aa23.17■■□□□ 1.3
GPHN-211ENST00000556020 RTCBQ9Y3I0 505 aaKnown RBP23.16■■□□□ 1.3
GPHN-211ENST00000556020 TRAPPC3LQ5T215 181 aa23.14■■□□□ 1.29
GPHN-211ENST00000556020 RNMTO43148 476 aaKnown RBP23.13■■□□□ 1.29
GPHN-211ENST00000556020 SLC52A2Q9HAB3 445 aa23.13■■□□□ 1.29
GPHN-211ENST00000556020 TJP1Q07157 1748 aa23.13■■□□□ 1.29
GPHN-211ENST00000556020 MYH14Q7Z406 1995 aaKnown RBP23.12■■□□□ 1.29
GPHN-211ENST00000556020 CNTNAP4Q9C0A0 1308 aa23.12■■□□□ 1.29
GPHN-211ENST00000556020 CFAP53Q96M91 514 aa23.12■■□□□ 1.29
GPHN-211ENST00000556020 RC3H1Q5TC82 1133 aaKnown RBP23.11■■□□□ 1.29
GPHN-211ENST00000556020 CD2APQ9Y5K6 639 aa23.11■■□□□ 1.29
GPHN-211ENST00000556020 SLC39A6Q13433 755 aa23.1■■□□□ 1.29
GPHN-211ENST00000556020 MRC1P22897 1456 aa23.1■■□□□ 1.29
GPHN-211ENST00000556020 C4AP0C0L4 1744 aa23.09■■□□□ 1.29
GPHN-211ENST00000556020 RPS6KA4O75676 772 aa23.09■■□□□ 1.29
GPHN-211ENST00000556020 CRKLP46109 303 aaKnown RBP23.09■■□□□ 1.29
GPHN-211ENST00000556020 ARHGEF1Q92888 912 aaKnown RBP23.09■■□□□ 1.29
GPHN-211ENST00000556020 MMP10P09238 476 aa23.08■■□□□ 1.29
GPHN-211ENST00000556020 YBX3P16989 372 aaKnown RBP eCLIP23.08■■□□□ 1.29
GPHN-211ENST00000556020 PPP2R1AP30153 589 aa23.08■■□□□ 1.29
GPHN-211ENST00000556020 RFC4P35249 363 aa23.08■■□□□ 1.29
GPHN-211ENST00000556020 WWC3Q9ULE0 1092 aa23.08■■□□□ 1.29
GPHN-211ENST00000556020 ADAMTS7Q9UKP4 1686 aa23.08■■□□□ 1.29
GPHN-211ENST00000556020 UTRNP46939 3433 aa23.06■■□□□ 1.28
GPHN-211ENST00000556020 ADRA2BP18089 450 aa23.06■■□□□ 1.28
GPHN-211ENST00000556020 DNAJC10Q8IXB1 793 aa23.06■■□□□ 1.28
GPHN-211ENST00000556020 CICQ96RK0 1608 aaPredicted RBP23.06■■□□□ 1.28
GPHN-211ENST00000556020 ZNF784Q8NCA9 323 aaPredicted RBP23.05■■□□□ 1.28
GPHN-211ENST00000556020 GAS2L2Q8NHY3 880 aa23.05■■□□□ 1.28
GPHN-211ENST00000556020 PRKAR2BP31323 418 aa23.04■■□□□ 1.28
GPHN-211ENST00000556020 NLGN1Q8N2Q7 840 aa23.04■■□□□ 1.28
GPHN-211ENST00000556020 NUDCQ9Y266 331 aa23.04■■□□□ 1.28
GPHN-211ENST00000556020 KCPQ6ZWJ8 1503 aa23.03■■□□□ 1.28
GPHN-211ENST00000556020 GNAT3A8MTJ3 354 aa23.03■■□□□ 1.28
GPHN-211ENST00000556020 GRIN3BO60391 1043 aa23.02■■□□□ 1.28
GPHN-211ENST00000556020 U2AF1L5P0DN76 240 aaPredicted RBP23.02■■□□□ 1.28
GPHN-211ENST00000556020 GYS1P13807 737 aa23.02■■□□□ 1.28
GPHN-211ENST00000556020 U2AF1Q01081 240 aaKnown RBP eCLIP23.02■■□□□ 1.28
GPHN-211ENST00000556020 PHACTR3Q96KR7 559 aa23.02■■□□□ 1.28
GPHN-211ENST00000556020 RSPH6AQ9H0K4 717 aa23.02■■□□□ 1.28
GPHN-211ENST00000556020 SRP68Q9UHB9 627 aaKnown RBP23.02■■□□□ 1.28
GPHN-211ENST00000556020 TEFQ10587 303 aa23.01■■□□□ 1.27
GPHN-211ENST00000556020 INTS5Q6P9B9 1019 aaKnown RBP23.01■■□□□ 1.27
GPHN-211ENST00000556020 TTC5Q8N0Z6 440 aa23.01■■□□□ 1.27
GPHN-211ENST00000556020 CCDC87Q9NVE4 849 aa23.01■■□□□ 1.27
GPHN-211ENST00000556020 GOLGB1Q14789 3259 aaKnown RBP23■■□□□ 1.27
GPHN-211ENST00000556020 UBR2Q8IWV8 1755 aa23■■□□□ 1.27
GPHN-211ENST00000556020 IL17REQ8NFR9 667 aa23■■□□□ 1.27
GPHN-211ENST00000556020 PARP3Q9Y6F1 533 aa22.99■■□□□ 1.27
GPHN-211ENST00000556020 SIPA1L3O60292 1781 aaPredicted RBP22.99■■□□□ 1.27
GPHN-211ENST00000556020 CYP19A1P11511 503 aaPredicted RBP22.98■■□□□ 1.27
GPHN-211ENST00000556020 USP42Q9H9J4 1324 aaKnown RBP22.98■■□□□ 1.27
GPHN-211ENST00000556020 N4BP2Q86UW6 1770 aaPredicted RBP22.98■■□□□ 1.27
GPHN-211ENST00000556020 KIF13BQ9NQT8 1826 aa22.97■■□□□ 1.27
GPHN-211ENST00000556020 FKBP8Q14318 412 aa22.96■■□□□ 1.27
GPHN-211ENST00000556020 SOS1Q07889 1333 aaPredicted RBP22.95■■□□□ 1.26
GPHN-211ENST00000556020 ZBTB1Q9Y2K1 713 aa22.95■■□□□ 1.26
GPHN-211ENST00000556020 KIAA1551Q9HCM1 1747 aa22.94■■□□□ 1.26
GPHN-211ENST00000556020 PXDNLA1KZ92 1463 aa22.94■■□□□ 1.26
GPHN-211ENST00000556020 C10orf71Q711Q0 1435 aa22.94■■□□□ 1.26
GPHN-211ENST00000556020 ZPR1O75312 459 aa22.94■■□□□ 1.26
GPHN-211ENST00000556020 VSIG10Q8N0Z9 540 aa22.94■■□□□ 1.26
GPHN-211ENST00000556020 CANXP27824 592 aaKnown RBP22.93■■□□□ 1.26
GPHN-211ENST00000556020 USPL1Q5W0Q7 1092 aa22.93■■□□□ 1.26
GPHN-211ENST00000556020 ZNF790Q6PG37 636 aa22.93■■□□□ 1.26
GPHN-211ENST00000556020 ZNF496Q96IT1 587 aaPredicted RBP22.93■■□□□ 1.26
GPHN-211ENST00000556020 COL15A1P39059 1388 aa22.92■■□□□ 1.26
GPHN-211ENST00000556020 A0A0G2JLW4 131 aa22.92■■□□□ 1.26
GPHN-211ENST00000556020 FCHSD2O94868 740 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms