RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 GPR162Q16538 588 aa12.25□□□□□ -0.45
AC004828.1-201ENST00000555303 C1orf141Q5JVX7 400 aa12.25□□□□□ -0.45
AC004828.1-201ENST00000555303 KLHL34Q8N239 644 aa12.25□□□□□ -0.45
AC004828.1-201ENST00000555303 ATG3Q9NT62 314 aa12.25□□□□□ -0.45
AC004828.1-201ENST00000555303 ASAP1Q9ULH1 1129 aa12.25□□□□□ -0.45
AC004828.1-201ENST00000555303 ADAMTS7Q9UKP4 1686 aa12.25□□□□□ -0.45
AC004828.1-201ENST00000555303 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.24□□□□□ -0.45
AC004828.1-201ENST00000555303 C4AP0C0L4 1744 aa12.24□□□□□ -0.45
AC004828.1-201ENST00000555303 MRC1P22897 1456 aa12.24□□□□□ -0.45
AC004828.1-201ENST00000555303 IL13P35225 146 aa12.24□□□□□ -0.45
AC004828.1-201ENST00000555303 ATP6V1AP38606 617 aa12.24□□□□□ -0.45
AC004828.1-201ENST00000555303 MSL1Q68DK7 614 aa12.24□□□□□ -0.45
AC004828.1-201ENST00000555303 LINC00116Q8NCU8 138 aa12.24□□□□□ -0.45
AC004828.1-201ENST00000555303 KIF13BQ9NQT8 1826 aa12.24□□□□□ -0.45
AC004828.1-201ENST00000555303 CD2APQ9Y5K6 639 aa12.24□□□□□ -0.45
AC004828.1-201ENST00000555303 TJP1Q07157 1748 aa12.23□□□□□ -0.45
AC004828.1-201ENST00000555303 PER1O15534 1290 aaPredicted RBP12.23□□□□□ -0.45
AC004828.1-201ENST00000555303 CABP4P57796 275 aa12.23□□□□□ -0.45
AC004828.1-201ENST00000555303 ITPK1Q13572 414 aa12.23□□□□□ -0.45
AC004828.1-201ENST00000555303 SULT6B1Q6IMI4 303 aa12.23□□□□□ -0.45
AC004828.1-201ENST00000555303 AEBP1Q8IUX7 1158 aa12.23□□□□□ -0.45
AC004828.1-201ENST00000555303 CNTNAP4Q9C0A0 1308 aa12.22□□□□□ -0.45
AC004828.1-201ENST00000555303 GNPATO15228 680 aa12.22□□□□□ -0.45
AC004828.1-201ENST00000555303 GRIN3BO60391 1043 aa12.22□□□□□ -0.45
AC004828.1-201ENST00000555303 PHF14O94880 888 aa12.22□□□□□ -0.45
AC004828.1-201ENST00000555303 ADRA2BP18089 450 aa12.22□□□□□ -0.45
AC004828.1-201ENST00000555303 MTHFSP49914 203 aa12.22□□□□□ -0.45
AC004828.1-201ENST00000555303 RC3H1Q5TC82 1133 aaKnown RBP12.22□□□□□ -0.45
AC004828.1-201ENST00000555303 NLGN2Q8NFZ4 835 aa12.22□□□□□ -0.45
AC004828.1-201ENST00000555303 AMIGO3Q86WK7 504 aa12.21□□□□□ -0.45
AC004828.1-201ENST00000555303 ZNF784Q8NCA9 323 aaPredicted RBP12.21□□□□□ -0.45
AC004828.1-201ENST00000555303 MYH14Q7Z406 1995 aaKnown RBP12.21□□□□□ -0.46
AC004828.1-201ENST00000555303 COL3A1P02461 1466 aaPredicted RBP12.21□□□□□ -0.46
AC004828.1-201ENST00000555303 AKAP4Q5JQC9 854 aa12.2□□□□□ -0.46
AC004828.1-201ENST00000555303 RTCBQ9Y3I0 505 aaKnown RBP12.2□□□□□ -0.46
AC004828.1-201ENST00000555303 UBR2Q8IWV8 1755 aa12.2□□□□□ -0.46
AC004828.1-201ENST00000555303 PELP1Q8IZL8 1130 aaKnown RBP12.19□□□□□ -0.46
AC004828.1-201ENST00000555303 RBM42Q9BTD8 480 aaKnown RBP12.19□□□□□ -0.46
AC004828.1-201ENST00000555303 KIAA1551Q9HCM1 1747 aa12.18□□□□□ -0.46
AC004828.1-201ENST00000555303 DIAPH1O60610 1272 aaKnown RBP12.18□□□□□ -0.46
AC004828.1-201ENST00000555303 TRAPPC3LQ5T215 181 aa12.18□□□□□ -0.46
AC004828.1-201ENST00000555303 NFATC2IPQ8NCF5 419 aa12.18□□□□□ -0.46
AC004828.1-201ENST00000555303 SLC4A9Q96Q91 983 aa12.18□□□□□ -0.46
AC004828.1-201ENST00000555303 RPS6KA4O75676 772 aa12.17□□□□□ -0.46
AC004828.1-201ENST00000555303 YBX3P16989 372 aaKnown RBP eCLIP12.17□□□□□ -0.46
AC004828.1-201ENST00000555303 CC2D1BQ5T0F9 858 aaKnown RBP12.17□□□□□ -0.46
AC004828.1-201ENST00000555303 NLGN1Q8N2Q7 840 aa12.17□□□□□ -0.46
AC004828.1-201ENST00000555303 SLC52A2Q9HAB3 445 aa12.17□□□□□ -0.46
AC004828.1-201ENST00000555303 SIPA1L3O60292 1781 aaPredicted RBP12.17□□□□□ -0.46
AC004828.1-201ENST00000555303 C10orf71Q711Q0 1435 aa12.16□□□□□ -0.46
AC004828.1-201ENST00000555303 BRCA1P38398 1863 aaKnown RBP12.16□□□□□ -0.46
AC004828.1-201ENST00000555303 KCPQ6ZWJ8 1503 aa12.16□□□□□ -0.46
AC004828.1-201ENST00000555303 PTCD1O75127 700 aaKnown RBP12.15□□□□□ -0.46
AC004828.1-201ENST00000555303 MMP10P09238 476 aa12.15□□□□□ -0.46
AC004828.1-201ENST00000555303 HMOX1P09601 288 aa12.15□□□□□ -0.46
AC004828.1-201ENST00000555303 RFC4P35249 363 aa12.15□□□□□ -0.46
AC004828.1-201ENST00000555303 N4BP2Q86UW6 1770 aaPredicted RBP12.15□□□□□ -0.46
AC004828.1-201ENST00000555303 RNMTO43148 476 aaKnown RBP12.14□□□□□ -0.47
AC004828.1-201ENST00000555303 CRKLP46109 303 aaKnown RBP12.14□□□□□ -0.47
AC004828.1-201ENST00000555303 SMIM5Q71RC9 77 aa12.14□□□□□ -0.47
AC004828.1-201ENST00000555303 ARHGEF1Q92888 912 aaKnown RBP12.14□□□□□ -0.47
AC004828.1-201ENST00000555303 PXDNLA1KZ92 1463 aa12.14□□□□□ -0.47
AC004828.1-201ENST00000555303 ARFGEF1Q9Y6D6 1849 aa12.14□□□□□ -0.47
AC004828.1-201ENST00000555303 GYS1P13807 737 aa12.13□□□□□ -0.47
AC004828.1-201ENST00000555303 USP42Q9H9J4 1324 aaKnown RBP12.12□□□□□ -0.47
AC004828.1-201ENST00000555303 TGFB2P61812 414 aa12.12□□□□□ -0.47
AC004828.1-201ENST00000555303 MTHFSDQ2M296 383 aaKnown RBP12.12□□□□□ -0.47
AC004828.1-201ENST00000555303 VSIG10Q8N0Z9 540 aa12.12□□□□□ -0.47
AC004828.1-201ENST00000555303 GAS2L2Q8NHY3 880 aa12.12□□□□□ -0.47
AC004828.1-201ENST00000555303 CFAP53Q96M91 514 aa12.12□□□□□ -0.47
AC004828.1-201ENST00000555303 CCDC87Q9NVE4 849 aa12.12□□□□□ -0.47
AC004828.1-201ENST00000555303 ADCY9O60503 1353 aa12.12□□□□□ -0.47
AC004828.1-201ENST00000555303 LGR6Q9HBX8 967 aa12.11□□□□□ -0.47
AC004828.1-201ENST00000555303 PARP3Q9Y6F1 533 aa12.11□□□□□ -0.47
AC004828.1-201ENST00000555303 GNAT3A8MTJ3 354 aa12.1□□□□□ -0.47
AC004828.1-201ENST00000555303 U2SURPO15042 1029 aaKnown RBP12.1□□□□□ -0.47
AC004828.1-201ENST00000555303 GIGYF1O75420 1035 aaPredicted RBP12.1□□□□□ -0.47
AC004828.1-201ENST00000555303 NRXN2Q9P2S2 1712 aa12.1□□□□□ -0.47
AC004828.1-201ENST00000555303 ATP10DQ9P241 1426 aa12.1□□□□□ -0.47
AC004828.1-201ENST00000555303 SCN7AQ01118 1682 aa12.1□□□□□ -0.47
AC004828.1-201ENST00000555303 COL15A1P39059 1388 aa12.09□□□□□ -0.47
AC004828.1-201ENST00000555303 CYP19A1P11511 503 aaPredicted RBP12.09□□□□□ -0.47
AC004828.1-201ENST00000555303 INTS5Q6P9B9 1019 aaKnown RBP12.09□□□□□ -0.47
AC004828.1-201ENST00000555303 TTC5Q8N0Z6 440 aa12.09□□□□□ -0.47
AC004828.1-201ENST00000555303 NUDCQ9Y266 331 aa12.09□□□□□ -0.47
AC004828.1-201ENST00000555303 DLEC1Q9Y238 1755 aa12.09□□□□□ -0.47
AC004828.1-201ENST00000555303 AFDNP55196 1824 aaKnown RBP12.09□□□□□ -0.47
AC004828.1-201ENST00000555303 SOS1Q07889 1333 aaPredicted RBP12.09□□□□□ -0.47
AC004828.1-201ENST00000555303 CEMIPQ8WUJ3 1361 aa12.08□□□□□ -0.48
AC004828.1-201ENST00000555303 ZPR1O75312 459 aa12.08□□□□□ -0.48
AC004828.1-201ENST00000555303 C1QTNF8P60827 252 aa12.08□□□□□ -0.48
AC004828.1-201ENST00000555303 TEFQ10587 303 aa12.08□□□□□ -0.48
AC004828.1-201ENST00000555303 DNAJC10Q8IXB1 793 aa12.08□□□□□ -0.48
AC004828.1-201ENST00000555303 SLC39A6Q13433 755 aa12.07□□□□□ -0.48
AC004828.1-201ENST00000555303 TEX13AQ9BXU3 409 aaPredicted RBP12.07□□□□□ -0.48
AC004828.1-201ENST00000555303 STARD3NLO95772 234 aa12.06□□□□□ -0.48
AC004828.1-201ENST00000555303 FKBP8Q14318 412 aa12.06□□□□□ -0.48
AC004828.1-201ENST00000555303 RSPH6AQ9H0K4 717 aa12.06□□□□□ -0.48
AC004828.1-201ENST00000555303 SRP68Q9UHB9 627 aaKnown RBP12.06□□□□□ -0.48
AC004828.1-201ENST00000555303 NARFQ9UHQ1 456 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms