RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 A2ML1A8K2U0 1454 aa14.85□□□□□ -0.03
ARHGEF40-206ENST00000555232 ABCA9Q8IUA7 1624 aa14.85□□□□□ -0.03
ARHGEF40-206ENST00000555232 IP6K1Q92551 441 aa14.85□□□□□ -0.03
ARHGEF40-206ENST00000555232 SHROOM2Q13796 1616 aa14.85□□□□□ -0.03
ARHGEF40-206ENST00000555232 DBF4Q9UBU7 674 aaPredicted RBP14.85□□□□□ -0.03
ARHGEF40-206ENST00000555232 MTMR7Q9Y216 660 aa14.85□□□□□ -0.03
ARHGEF40-206ENST00000555232 PNMA6EA0A0J9YXQ4 647 aa14.84□□□□□ -0.03
ARHGEF40-206ENST00000555232 NBPF7P0C2Y1 421 aaPredicted RBP14.84□□□□□ -0.03
ARHGEF40-206ENST00000555232 MX1P20591 662 aa14.84□□□□□ -0.03
ARHGEF40-206ENST00000555232 PPRC1Q5VV67 1664 aaKnown RBP14.84□□□□□ -0.03
ARHGEF40-206ENST00000555232 CHL1O00533 1208 aa14.84□□□□□ -0.03
ARHGEF40-206ENST00000555232 AEBP2Q6ZN18 517 aaPredicted RBP14.84□□□□□ -0.03
ARHGEF40-206ENST00000555232 IL16Q14005 1332 aa14.84□□□□□ -0.03
ARHGEF40-206ENST00000555232 KDM2BQ8NHM5 1336 aa14.84□□□□□ -0.03
ARHGEF40-206ENST00000555232 KDM5AP29375 1690 aaKnown RBP14.84□□□□□ -0.03
ARHGEF40-206ENST00000555232 CHMP5Q9NZZ3 219 aa14.84□□□□□ -0.03
ARHGEF40-206ENST00000555232 MADDQ8WXG6 1647 aa14.83□□□□□ -0.04
ARHGEF40-206ENST00000555232 KIDINS220Q9ULH0 1771 aa14.83□□□□□ -0.04
ARHGEF40-206ENST00000555232 SDSP20132 328 aa14.83□□□□□ -0.04
ARHGEF40-206ENST00000555232 TRMT2AQ8IZ69 625 aaKnown RBP14.83□□□□□ -0.04
ARHGEF40-206ENST00000555232 FBXW7Q969H0 707 aa14.83□□□□□ -0.04
ARHGEF40-206ENST00000555232 MYOM2P54296 1465 aa14.83□□□□□ -0.04
ARHGEF40-206ENST00000555232 MAP3K4Q9Y6R4 1608 aa14.83□□□□□ -0.04
ARHGEF40-206ENST00000555232 NUCB1Q02818 461 aa14.83□□□□□ -0.04
ARHGEF40-206ENST00000555232 IFNL2Q8IZJ0 200 aa14.83□□□□□ -0.04
ARHGEF40-206ENST00000555232 USP19O94966 1318 aa14.82□□□□□ -0.04
ARHGEF40-206ENST00000555232 AMOTQ4VCS5 1084 aa14.82□□□□□ -0.04
ARHGEF40-206ENST00000555232 AXIN2Q9Y2T1 843 aa14.82□□□□□ -0.04
ARHGEF40-206ENST00000555232 SPHKAPQ2M3C7 1700 aa14.82□□□□□ -0.04
ARHGEF40-206ENST00000555232 CEP85Q6P2H3 762 aa14.82□□□□□ -0.04
ARHGEF40-206ENST00000555232 ARID3AQ99856 593 aa14.82□□□□□ -0.04
ARHGEF40-206ENST00000555232 TMOD3Q9NYL9 352 aa14.82□□□□□ -0.04
ARHGEF40-206ENST00000555232 HDAC5Q9UQL6 1122 aa14.82□□□□□ -0.04
ARHGEF40-206ENST00000555232 MSH6P52701 1360 aa14.82□□□□□ -0.04
ARHGEF40-206ENST00000555232 PROSER3Q2NL68 480 aa14.81□□□□□ -0.04
ARHGEF40-206ENST00000555232 ABCA6Q8N139 1617 aa14.81□□□□□ -0.04
ARHGEF40-206ENST00000555232 A1BGP04217 495 aa14.81□□□□□ -0.04
ARHGEF40-206ENST00000555232 AAMPQ13685 434 aa14.81□□□□□ -0.04
ARHGEF40-206ENST00000555232 RNF214Q8ND24 703 aa14.81□□□□□ -0.04
ARHGEF40-206ENST00000555232 NGLY1Q96IV0 654 aa14.81□□□□□ -0.04
ARHGEF40-206ENST00000555232 BTG4Q9NY30 223 aa14.81□□□□□ -0.04
ARHGEF40-206ENST00000555232 ERC2O15083 957 aa14.8□□□□□ -0.04
ARHGEF40-206ENST00000555232 NPHP3Q7Z494 1330 aa14.8□□□□□ -0.04
ARHGEF40-206ENST00000555232 GOLGA6L3A6NEY3 463 aa14.8□□□□□ -0.04
ARHGEF40-206ENST00000555232 CNTROBQ8N137 903 aa14.8□□□□□ -0.04
ARHGEF40-206ENST00000555232 TBC1D2BQ9UPU7 963 aa14.8□□□□□ -0.04
ARHGEF40-206ENST00000555232 ZKSCAN1P17029 563 aaPredicted RBP14.8□□□□□ -0.04
ARHGEF40-206ENST00000555232 FAM182BQ5T319 152 aa14.8□□□□□ -0.04
ARHGEF40-206ENST00000555232 CNNM1Q9NRU3 951 aa14.8□□□□□ -0.04
ARHGEF40-206ENST00000555232 CEBPZQ03701 1054 aaKnown RBP14.79□□□□□ -0.04
ARHGEF40-206ENST00000555232 KCNQ4P56696 695 aa14.79□□□□□ -0.04
ARHGEF40-206ENST00000555232 ZNF496Q96IT1 587 aaPredicted RBP14.79□□□□□ -0.04
ARHGEF40-206ENST00000555232 USP16Q9Y5T5 823 aa14.79□□□□□ -0.04
ARHGEF40-206ENST00000555232 HDAC1Q13547 482 aaPredicted RBP14.79□□□□□ -0.04
ARHGEF40-206ENST00000555232 INSRP06213 1382 aa14.78□□□□□ -0.04
ARHGEF40-206ENST00000555232 RNMTO43148 476 aaKnown RBP14.78□□□□□ -0.04
ARHGEF40-206ENST00000555232 GNL2Q13823 731 aaKnown RBP14.78□□□□□ -0.04
ARHGEF40-206ENST00000555232 ANKRD13DQ6ZTN6 518 aa14.78□□□□□ -0.04
ARHGEF40-206ENST00000555232 ANKRD44Q8N8A2 993 aa14.78□□□□□ -0.04
ARHGEF40-206ENST00000555232 ZNF335Q9H4Z2 1342 aaPredicted RBP14.78□□□□□ -0.04
ARHGEF40-206ENST00000555232 TMEM94Q12767 1356 aa14.78□□□□□ -0.04
ARHGEF40-206ENST00000555232 AKAP4Q5JQC9 854 aa14.78□□□□□ -0.04
ARHGEF40-206ENST00000555232 CCDC24Q8N4L8 307 aa14.78□□□□□ -0.04
ARHGEF40-206ENST00000555232 ZCRB1Q8TBF4 217 aaKnown RBP14.78□□□□□ -0.04
ARHGEF40-206ENST00000555232 RIMBP3CA6NJZ7 1639 aa14.78□□□□□ -0.04
ARHGEF40-206ENST00000555232 RIMBP3BA6NNM3 1639 aa14.78□□□□□ -0.04
ARHGEF40-206ENST00000555232 RIMBP3Q9UFD9 1639 aa14.78□□□□□ -0.04
ARHGEF40-206ENST00000555232 PRPF40AO75400 957 aaKnown RBP14.78□□□□□ -0.04
ARHGEF40-206ENST00000555232 GDPD2Q9HCC8 539 aa14.78□□□□□ -0.04
ARHGEF40-206ENST00000555232 IQSEC3Q9UPP2 1182 aaPredicted RBP14.78□□□□□ -0.04
ARHGEF40-206ENST00000555232 CPA1P15085 419 aa14.77□□□□□ -0.04
ARHGEF40-206ENST00000555232 VPS37DQ86XT2 251 aa14.77□□□□□ -0.04
ARHGEF40-206ENST00000555232 HSP90AB4PQ58FF6 505 aa14.77□□□□□ -0.04
ARHGEF40-206ENST00000555232 HSP90AB3PQ58FF7 597 aa14.77□□□□□ -0.04
ARHGEF40-206ENST00000555232 DNTTIP2Q5QJE6 756 aaKnown RBP14.77□□□□□ -0.04
ARHGEF40-206ENST00000555232 SMC5Q8IY18 1101 aa14.77□□□□□ -0.04
ARHGEF40-206ENST00000555232 FMNL2Q96PY5 1086 aa14.77□□□□□ -0.04
ARHGEF40-206ENST00000555232 WWC3Q9ULE0 1092 aa14.77□□□□□ -0.04
ARHGEF40-206ENST00000555232 SYNMO15061 1565 aa14.77□□□□□ -0.05
ARHGEF40-206ENST00000555232 KIF6Q6ZMV9 814 aa14.77□□□□□ -0.05
ARHGEF40-206ENST00000555232 FERMT3Q86UX7 667 aa14.77□□□□□ -0.05
ARHGEF40-206ENST00000555232 TBC1D32Q96NH3 1257 aa14.77□□□□□ -0.05
ARHGEF40-206ENST00000555232 C8orf37Q96NL8 207 aa14.77□□□□□ -0.05
ARHGEF40-206ENST00000555232 SLAIN2Q9P270 581 aa14.77□□□□□ -0.05
ARHGEF40-206ENST00000555232 SBNO1A3KN83 1393 aa14.77□□□□□ -0.05
ARHGEF40-206ENST00000555232 MAP3K5Q99683 1374 aa14.77□□□□□ -0.05
ARHGEF40-206ENST00000555232 CCDC57Q2TAC2 916 aa14.76□□□□□ -0.05
ARHGEF40-206ENST00000555232 PRPF40BQ6NWY9 871 aaKnown RBP14.76□□□□□ -0.05
ARHGEF40-206ENST00000555232 RAB11FIP4Q86YS3 637 aa14.76□□□□□ -0.05
ARHGEF40-206ENST00000555232 TRAK2O60296 914 aa14.76□□□□□ -0.05
ARHGEF40-206ENST00000555232 PDE1AP54750 535 aa14.76□□□□□ -0.05
ARHGEF40-206ENST00000555232 PLEKHM2Q8IWE5 1019 aa14.76□□□□□ -0.05
ARHGEF40-206ENST00000555232 RHPN1Q8TCX5 695 aa14.76□□□□□ -0.05
ARHGEF40-206ENST00000555232 RUFY2Q8WXA3 655 aa14.76□□□□□ -0.05
ARHGEF40-206ENST00000555232 PTPRCP08575 1304 aa14.76□□□□□ -0.05
ARHGEF40-206ENST00000555232 DIP2CQ9Y2E4 1556 aa14.76□□□□□ -0.05
ARHGEF40-206ENST00000555232 LARP1Q6PKG0 1096 aaKnown RBP14.75□□□□□ -0.05
ARHGEF40-206ENST00000555232 DDX46Q7L014 1031 aaKnown RBP14.75□□□□□ -0.05
ARHGEF40-206ENST00000555232 HELBQ8NG08 1087 aaPredicted RBP14.75□□□□□ -0.05
ARHGEF40-206ENST00000555232 KIF1BPQ96EK5 621 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms