RNA–Protein interactions for RNA: ENST00000555185.5

PRKCH-213, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-213ENST00000555185 TATP17735 454 aaPredicted RBP12.44□□□□□ -0.42
PRKCH-213ENST00000555185 SIK1P57059 783 aa12.44□□□□□ -0.42
PRKCH-213ENST00000555185 SMC1BQ8NDV3 1235 aa12.44□□□□□ -0.42
PRKCH-213ENST00000555185 SMARCC1Q92922 1105 aaPredicted RBP12.44□□□□□ -0.42
PRKCH-213ENST00000555185 C4AP0C0L4 1744 aa12.43□□□□□ -0.42
PRKCH-213ENST00000555185 KCNA3P22001 575 aa12.43□□□□□ -0.42
PRKCH-213ENST00000555185 COG3Q96JB2 828 aa12.42□□□□□ -0.42
PRKCH-213ENST00000555185 ASAP1Q9ULH1 1129 aa12.42□□□□□ -0.42
PRKCH-213ENST00000555185 CGNL1Q0VF96 1302 aa12.41□□□□□ -0.42
PRKCH-213ENST00000555185 ATP6V1AP38606 617 aa12.41□□□□□ -0.42
PRKCH-213ENST00000555185 CCDC87Q9NVE4 849 aa12.41□□□□□ -0.42
PRKCH-213ENST00000555185 TMF1P82094 1093 aa12.4□□□□□ -0.42
PRKCH-213ENST00000555185 RASSF7Q02833 373 aa12.4□□□□□ -0.42
PRKCH-213ENST00000555185 DCAF5Q96JK2 942 aa12.4□□□□□ -0.42
PRKCH-213ENST00000555185 TERF2IPQ9NYB0 399 aa12.4□□□□□ -0.42
PRKCH-213ENST00000555185 HMGB2P26583 209 aaKnown RBP12.39□□□□□ -0.43
PRKCH-213ENST00000555185 CHRNA5P30532 468 aa12.39□□□□□ -0.43
PRKCH-213ENST00000555185 HSP90AB2PQ58FF8 381 aa12.39□□□□□ -0.43
PRKCH-213ENST00000555185 MKRN1Q9UHC7 482 aaKnown RBP12.39□□□□□ -0.43
PRKCH-213ENST00000555185 CCDC88AQ3V6T2 1871 aa12.38□□□□□ -0.43
PRKCH-213ENST00000555185 GYS1P13807 737 aa12.38□□□□□ -0.43
PRKCH-213ENST00000555185 DALRD3Q5D0E6 543 aaKnown RBP12.38□□□□□ -0.43
PRKCH-213ENST00000555185 TRAPPC3LQ5T215 181 aa12.38□□□□□ -0.43
PRKCH-213ENST00000555185 NLGN1Q8N2Q7 840 aa12.38□□□□□ -0.43
PRKCH-213ENST00000555185 ARHGEF1Q92888 912 aaKnown RBP12.38□□□□□ -0.43
PRKCH-213ENST00000555185 SIN3AQ96ST3 1273 aa12.38□□□□□ -0.43
PRKCH-213ENST00000555185 PIM2Q9P1W9 311 aa12.38□□□□□ -0.43
PRKCH-213ENST00000555185 PARP3Q9Y6F1 533 aa12.38□□□□□ -0.43
PRKCH-213ENST00000555185 RTL1A6NKG5 1358 aa12.38□□□□□ -0.43
PRKCH-213ENST00000555185 SMG6Q86US8 1419 aaKnown RBP12.37□□□□□ -0.43
PRKCH-213ENST00000555185 FOXN1O15353 648 aa12.37□□□□□ -0.43
PRKCH-213ENST00000555185 FAM161AQ3B820 660 aa12.37□□□□□ -0.43
PRKCH-213ENST00000555185 TMOD3Q9NYL9 352 aa12.37□□□□□ -0.43
PRKCH-213ENST00000555185 RTCBQ9Y3I0 505 aaKnown RBP12.37□□□□□ -0.43
PRKCH-213ENST00000555185 MYH14Q7Z406 1995 aaKnown RBP12.36□□□□□ -0.43
PRKCH-213ENST00000555185 SLC4A9Q96Q91 983 aa12.36□□□□□ -0.43
PRKCH-213ENST00000555185 GGNBP2Q9H3C7 697 aa12.36□□□□□ -0.43
PRKCH-213ENST00000555185 ATG3Q9NT62 314 aa12.36□□□□□ -0.43
PRKCH-213ENST00000555185 TIAM2Q8IVF5 1701 aa12.35□□□□□ -0.43
PRKCH-213ENST00000555185 SRP68Q9UHB9 627 aaKnown RBP12.35□□□□□ -0.43
PRKCH-213ENST00000555185 COL5A3P25940 1745 aaPredicted RBP12.34□□□□□ -0.43
PRKCH-213ENST00000555185 VEGFAP15692 232 aaPredicted RBP12.34□□□□□ -0.43
PRKCH-213ENST00000555185 RFC4P35249 363 aa12.34□□□□□ -0.43
PRKCH-213ENST00000555185 DDR1Q08345 913 aa12.34□□□□□ -0.43
PRKCH-213ENST00000555185 NEUROD1Q13562 356 aa12.34□□□□□ -0.43
PRKCH-213ENST00000555185 RBM42Q9BTD8 480 aaKnown RBP12.34□□□□□ -0.43
PRKCH-213ENST00000555185 KDRP35968 1356 aa12.33□□□□□ -0.44
PRKCH-213ENST00000555185 POTECB2RU33 542 aa12.33□□□□□ -0.44
PRKCH-213ENST00000555185 NKX1-1Q15270 411 aaPredicted RBP12.33□□□□□ -0.44
PRKCH-213ENST00000555185 CARD11Q9BXL7 1154 aa12.33□□□□□ -0.44
PRKCH-213ENST00000555185 INSRP06213 1382 aa12.32□□□□□ -0.44
PRKCH-213ENST00000555185 GLTPD2A6NH11 291 aa12.32□□□□□ -0.44
PRKCH-213ENST00000555185 FKBP8Q14318 412 aa12.32□□□□□ -0.44
PRKCH-213ENST00000555185 FYB1O15117 783 aa12.31□□□□□ -0.44
PRKCH-213ENST00000555185 FLT4P35916 1363 aa12.3□□□□□ -0.44
PRKCH-213ENST00000555185 KDM6AO15550 1401 aaPredicted RBP12.3□□□□□ -0.44
PRKCH-213ENST00000555185 RPS6KA4O75676 772 aa12.3□□□□□ -0.44
PRKCH-213ENST00000555185 POTEIP0CG38 1075 aa12.3□□□□□ -0.44
PRKCH-213ENST00000555185 POTEJP0CG39 1038 aa12.3□□□□□ -0.44
PRKCH-213ENST00000555185 SPG7Q9UQ90 795 aa12.3□□□□□ -0.44
PRKCH-213ENST00000555185 EMILIN1Q9Y6C2 1016 aa12.3□□□□□ -0.44
PRKCH-213ENST00000555185 PHKG2P15735 406 aa12.29□□□□□ -0.44
PRKCH-213ENST00000555185 ADRA2BP18089 450 aa12.29□□□□□ -0.44
PRKCH-213ENST00000555185 LMNB1P20700 586 aa12.29□□□□□ -0.44
PRKCH-213ENST00000555185 LBX1P52954 281 aa12.29□□□□□ -0.44
PRKCH-213ENST00000555185 PRDM10Q9NQV6 1147 aa12.29□□□□□ -0.44
PRKCH-213ENST00000555185 CREBZFQ9NS37 354 aa12.29□□□□□ -0.44
PRKCH-213ENST00000555185 KIF20BQ96Q89 1820 aa12.29□□□□□ -0.44
PRKCH-213ENST00000555185 CNTNAP4Q9C0A0 1308 aa12.29□□□□□ -0.44
PRKCH-213ENST00000555185 AFDNP55196 1824 aaKnown RBP12.28□□□□□ -0.44
PRKCH-213ENST00000555185 ABHD8Q96I13 439 aa12.28□□□□□ -0.44
PRKCH-213ENST00000555185 POLRMTO00411 1230 aaKnown RBP12.27□□□□□ -0.45
PRKCH-213ENST00000555185 PPM1GO15355 546 aaPredicted RBP12.27□□□□□ -0.45
PRKCH-213ENST00000555185 CTCFP49711 727 aaPredicted RBP12.27□□□□□ -0.45
PRKCH-213ENST00000555185 RC3H1Q5TC82 1133 aaKnown RBP12.27□□□□□ -0.45
PRKCH-213ENST00000555185 ZC3H4Q9UPT8 1303 aaKnown RBP12.27□□□□□ -0.45
PRKCH-213ENST00000555185 CNTNAP1P78357 1384 aa12.27□□□□□ -0.45
PRKCH-213ENST00000555185 NCAPD2Q15021 1401 aa12.27□□□□□ -0.45
PRKCH-213ENST00000555185 ZNF831Q5JPB2 1677 aa12.26□□□□□ -0.45
PRKCH-213ENST00000555185 DLEC1Q9Y238 1755 aa12.26□□□□□ -0.45
PRKCH-213ENST00000555185 NFKBIEO00221 500 aa12.26□□□□□ -0.45
PRKCH-213ENST00000555185 VEGFBP49765 207 aa12.26□□□□□ -0.45
PRKCH-213ENST00000555185 IFNL2Q8IZJ0 200 aa12.26□□□□□ -0.45
PRKCH-213ENST00000555185 AIDAQ96BJ3 306 aa12.26□□□□□ -0.45
PRKCH-213ENST00000555185 PCDH10Q9P2E7 1040 aa12.26□□□□□ -0.45
PRKCH-213ENST00000555185 USP42Q9H9J4 1324 aaKnown RBP12.26□□□□□ -0.45
PRKCH-213ENST00000555185 VIRMAQ69YN4 1812 aaKnown RBP12.25□□□□□ -0.45
PRKCH-213ENST00000555185 PTCD1O75127 700 aaKnown RBP12.25□□□□□ -0.45
PRKCH-213ENST00000555185 CRKLP46109 303 aaKnown RBP12.25□□□□□ -0.45
PRKCH-213ENST00000555185 CHADLQ6NUI6 762 aa12.25□□□□□ -0.45
PRKCH-213ENST00000555185 EYA1Q99502 592 aa12.25□□□□□ -0.45
PRKCH-213ENST00000555185 ZNF219Q9P2Y4 722 aaPredicted RBP12.25□□□□□ -0.45
PRKCH-213ENST00000555185 ADAMTS7Q9UKP4 1686 aa12.25□□□□□ -0.45
PRKCH-213ENST00000555185 TJP1Q07157 1748 aa12.24□□□□□ -0.45
PRKCH-213ENST00000555185 PUS7Q96PZ0 661 aaKnown RBP12.24□□□□□ -0.45
PRKCH-213ENST00000555185 TESK2Q96S53 571 aa12.24□□□□□ -0.45
PRKCH-213ENST00000555185 DICER1Q9UPY3 1922 aaKnown RBP12.23□□□□□ -0.45
PRKCH-213ENST00000555185 CCDC85CA6NKD9 419 aa12.23□□□□□ -0.45
PRKCH-213ENST00000555185 HSPA8P11142 646 aaKnown RBP12.23□□□□□ -0.45
PRKCH-213ENST00000555185 TM4SF1P30408 202 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms