RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 PLEKHG2Q9H7P9 1386 aa27.8■■■□□ 2.04
HIF1A-206ENST00000553999 ERVV-2B6SEH9 535 aa27.79■■■□□ 2.04
HIF1A-206ENST00000553999 AMIGO3Q86WK7 504 aa27.79■■■□□ 2.04
HIF1A-206ENST00000553999 SGIP1Q9BQI5 828 aa27.79■■■□□ 2.04
HIF1A-206ENST00000553999 PPP2R1AP30153 589 aa27.78■■■□□ 2.04
HIF1A-206ENST00000553999 ARXQ96QS3 562 aa27.78■■■□□ 2.04
HIF1A-206ENST00000553999 MTHFSDQ2M296 383 aaKnown RBP27.77■■■□□ 2.04
HIF1A-206ENST00000553999 NFATC2IPQ8NCF5 419 aa27.77■■■□□ 2.04
HIF1A-206ENST00000553999 CFAP53Q96M91 514 aa27.77■■■□□ 2.04
HIF1A-206ENST00000553999 PTCD1O75127 700 aaKnown RBP27.75■■■□□ 2.03
HIF1A-206ENST00000553999 AKAP4Q5JQC9 854 aa27.75■■■□□ 2.03
HIF1A-206ENST00000553999 LGR6Q9HBX8 967 aa27.75■■■□□ 2.03
HIF1A-206ENST00000553999 GNPATO15228 680 aa27.74■■■□□ 2.03
HIF1A-206ENST00000553999 POLD1P28340 1107 aa27.74■■■□□ 2.03
HIF1A-206ENST00000553999 SLC4A9Q96Q91 983 aa27.74■■■□□ 2.03
HIF1A-206ENST00000553999 SLC16A10Q8TF71 515 aa27.73■■■□□ 2.03
HIF1A-206ENST00000553999 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.71■■■□□ 2.03
HIF1A-206ENST00000553999 SYT17Q9BSW7 474 aa27.71■■■□□ 2.03
HIF1A-206ENST00000553999 SCN11AQ9UI33 1791 aa27.71■■■□□ 2.03
HIF1A-206ENST00000553999 RNMTO43148 476 aaKnown RBP27.7■■■□□ 2.02
HIF1A-206ENST00000553999 PRKAR2BP31323 418 aa27.69■■■□□ 2.02
HIF1A-206ENST00000553999 UBR3Q6ZT12 1888 aa27.68■■■□□ 2.02
HIF1A-206ENST00000553999 U2AF1L5P0DN76 240 aaPredicted RBP27.68■■■□□ 2.02
HIF1A-206ENST00000553999 U2AF1Q01081 240 aaKnown RBP eCLIP27.68■■■□□ 2.023e-6■■■■□ 23.3
HIF1A-206ENST00000553999 DDX10Q13206 875 aaKnown RBP27.67■■■□□ 2.02
HIF1A-206ENST00000553999 SLC39A6Q13433 755 aa27.67■■■□□ 2.02
HIF1A-206ENST00000553999 DCAF8L1A6NGE4 600 aa27.66■■■□□ 2.02
HIF1A-206ENST00000553999 SLC52A2Q9HAB3 445 aa27.66■■■□□ 2.02
HIF1A-206ENST00000553999 FLAD1Q8NFF5 587 aa27.65■■■□□ 2.02
HIF1A-206ENST00000553999 PHACTR3Q96KR7 559 aa27.65■■■□□ 2.02
HIF1A-206ENST00000553999 NUDCQ9Y266 331 aa27.65■■■□□ 2.02
HIF1A-206ENST00000553999 PELP1Q8IZL8 1130 aaKnown RBP27.64■■■□□ 2.02
HIF1A-206ENST00000553999 RSPH6AQ9H0K4 717 aa27.64■■■□□ 2.02
HIF1A-206ENST00000553999 VIRMAQ69YN4 1812 aaKnown RBP27.64■■■□□ 2.01
HIF1A-206ENST00000553999 MAP3K5Q99683 1374 aa27.63■■■□□ 2.01
HIF1A-206ENST00000553999 NLGN2Q8NFZ4 835 aa27.62■■■□□ 2.01
HIF1A-206ENST00000553999 MRC1P22897 1456 aa27.62■■■□□ 2.01
HIF1A-206ENST00000553999 SSFA2P28290 1259 aa27.61■■■□□ 2.01
HIF1A-206ENST00000553999 GAS2L2Q8NHY3 880 aa27.61■■■□□ 2.01
HIF1A-206ENST00000553999 COL24A1Q17RW2 1714 aa27.61■■■□□ 2.01
HIF1A-206ENST00000553999 HMGB2P26583 209 aaKnown RBP27.6■■■□□ 2.01
HIF1A-206ENST00000553999 RTCBQ9Y3I0 505 aaKnown RBP27.6■■■□□ 2.01
HIF1A-206ENST00000553999 COL5A3P25940 1745 aaPredicted RBP27.6■■■□□ 2.01
HIF1A-206ENST00000553999 TJP1Q07157 1748 aa27.59■■■□□ 2.01
HIF1A-206ENST00000553999 GNAT3A8MTJ3 354 aa27.58■■■□□ 2.01
HIF1A-206ENST00000553999 DNAJC10Q8IXB1 793 aa27.58■■■□□ 2.01
HIF1A-206ENST00000553999 CRKLP46109 303 aaKnown RBP27.57■■■□□ 2
HIF1A-206ENST00000553999 TEFQ10587 303 aa27.56■■■□□ 2
HIF1A-206ENST00000553999 IL17REQ8NFR9 667 aa27.56■■■□□ 2
HIF1A-206ENST00000553999 CNTNAP4Q9C0A0 1308 aa27.56■■■□□ 2
HIF1A-206ENST00000553999 ADAMTS7Q9UKP4 1686 aa27.56■■■□□ 2
HIF1A-206ENST00000553999 TRAPPC3LQ5T215 181 aa27.55■■■□□ 2
HIF1A-206ENST00000553999 WWC3Q9ULE0 1092 aa27.55■■■□□ 2
HIF1A-206ENST00000553999 ZNF831Q5JPB2 1677 aa27.54■■■□□ 2
HIF1A-206ENST00000553999 KCPQ6ZWJ8 1503 aa27.54■■■□□ 2
HIF1A-206ENST00000553999 GPR162Q16538 588 aa27.53■■■□□ 2
HIF1A-206ENST00000553999 ARHGEF1Q92888 912 aaKnown RBP27.53■■■□□ 2
HIF1A-206ENST00000553999 YY1P25490 414 aa27.52■■■□□ 2
HIF1A-206ENST00000553999 TTC5Q8N0Z6 440 aa27.52■■■□□ 2
HIF1A-206ENST00000553999 MYH14Q7Z406 1995 aaKnown RBP27.51■■■□□ 2
HIF1A-206ENST00000553999 RPS6KA4O75676 772 aa27.51■■□□□ 1.99
HIF1A-206ENST00000553999 RFC4P35249 363 aa27.51■■□□□ 1.99
HIF1A-206ENST00000553999 DCTN1Q14203 1278 aa27.51■■□□□ 1.99
HIF1A-206ENST00000553999 RC3H1Q5TC82 1133 aaKnown RBP27.51■■□□□ 1.99
HIF1A-206ENST00000553999 MCM10Q7L590 875 aa27.51■■□□□ 1.99
HIF1A-206ENST00000553999 SRP68Q9UHB9 627 aaKnown RBP27.51■■□□□ 1.99
HIF1A-206ENST00000553999 FCHSD2O94868 740 aa27.49■■□□□ 1.99
HIF1A-206ENST00000553999 MMP10P09238 476 aa27.49■■□□□ 1.99
HIF1A-206ENST00000553999 C4AP0C0L4 1744 aa27.48■■□□□ 1.99
HIF1A-206ENST00000553999 INTS5Q6P9B9 1019 aaKnown RBP27.48■■□□□ 1.99
HIF1A-206ENST00000553999 KCNQ3O43525 872 aa27.47■■□□□ 1.99
HIF1A-206ENST00000553999 CCDC87Q9NVE4 849 aa27.47■■□□□ 1.99
HIF1A-206ENST00000553999 RTF1Q92541 710 aaKnown RBP27.46■■□□□ 1.99
HIF1A-206ENST00000553999 ZNF496Q96IT1 587 aaPredicted RBP27.46■■□□□ 1.99
HIF1A-206ENST00000553999 CYP19A1P11511 503 aaPredicted RBP27.45■■□□□ 1.98
HIF1A-206ENST00000553999 ZBTB1Q9Y2K1 713 aa27.45■■□□□ 1.98
HIF1A-206ENST00000553999 GYS1P13807 737 aa27.44■■□□□ 1.98
HIF1A-206ENST00000553999 ADRA2BP18089 450 aa27.44■■□□□ 1.98
HIF1A-206ENST00000553999 RALBP1Q15311 655 aa27.44■■□□□ 1.98
HIF1A-206ENST00000553999 ZNF790Q6PG37 636 aa27.44■■□□□ 1.98
HIF1A-206ENST00000553999 SIPA1L3O60292 1781 aaPredicted RBP27.44■■□□□ 1.98
HIF1A-206ENST00000553999 UBR2Q8IWV8 1755 aa27.44■■□□□ 1.98
HIF1A-206ENST00000553999 CICQ96RK0 1608 aaPredicted RBP27.44■■□□□ 1.98
HIF1A-206ENST00000553999 BTBD11A6QL63 1104 aa27.43■■□□□ 1.98
HIF1A-206ENST00000553999 CANXP27824 592 aaKnown RBP27.43■■□□□ 1.98
HIF1A-206ENST00000553999 ZNF330Q9Y3S2 320 aaPredicted RBP27.43■■□□□ 1.98
HIF1A-206ENST00000553999 CEMIPQ8WUJ3 1361 aa27.43■■□□□ 1.98
HIF1A-206ENST00000553999 NEFMP07197 916 aa27.42■■□□□ 1.98
HIF1A-206ENST00000553999 YBX3P16989 372 aaKnown RBP eCLIP27.42■■□□□ 1.98
HIF1A-206ENST00000553999 CD2APQ9Y5K6 639 aa27.4■■□□□ 1.98
HIF1A-206ENST00000553999 SOS1Q07889 1333 aaPredicted RBP27.4■■□□□ 1.98
HIF1A-206ENST00000553999 USP42Q9H9J4 1324 aaKnown RBP27.4■■□□□ 1.98
HIF1A-206ENST00000553999 HEG1Q9ULI3 1381 aa27.39■■□□□ 1.98
HIF1A-206ENST00000553999 FKBP8Q14318 412 aa27.39■■□□□ 1.98
HIF1A-206ENST00000553999 NLGN1Q8N2Q7 840 aa27.39■■□□□ 1.98
HIF1A-206ENST00000553999 THUMPD2Q9BTF0 503 aaKnown RBP27.39■■□□□ 1.98
HIF1A-206ENST00000553999 MYBBP1AQ9BQG0 1328 aaKnown RBP27.39■■□□□ 1.97
HIF1A-206ENST00000553999 MAPK8IP3Q9UPT6 1336 aa27.39■■□□□ 1.97
HIF1A-206ENST00000553999 COL15A1P39059 1388 aa27.38■■□□□ 1.97
HIF1A-206ENST00000553999 USPL1Q5W0Q7 1092 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms