RNA–Protein interactions for RNA: ENST00000553444.1

HNRNPC-206, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-206ENST00000553444 NMRK2Q9NPI5 230 aa16.32■□□□□ 0.2
HNRNPC-206ENST00000553444 KDRP35968 1356 aa16.31■□□□□ 0.2
HNRNPC-206ENST00000553444 WASHC2AQ641Q2 1341 aa16.31■□□□□ 0.2
HNRNPC-206ENST00000553444 PPM1GO15355 546 aaPredicted RBP16.31■□□□□ 0.2
HNRNPC-206ENST00000553444 IFNL2Q8IZJ0 200 aa16.31■□□□□ 0.2
HNRNPC-206ENST00000553444 NLGN1Q8N2Q7 840 aa16.31■□□□□ 0.2
HNRNPC-206ENST00000553444 UBR3Q6ZT12 1888 aa16.31■□□□□ 0.2
HNRNPC-206ENST00000553444 DPEP1P16444 411 aa16.3■□□□□ 0.2
HNRNPC-206ENST00000553444 CDCA8Q53HL2 280 aa16.3■□□□□ 0.2
HNRNPC-206ENST00000553444 TRAPPC3LQ5T215 181 aa16.3■□□□□ 0.2
HNRNPC-206ENST00000553444 ARHGAP27Q6ZUM4 889 aa16.3■□□□□ 0.2
HNRNPC-206ENST00000553444 RTCBQ9Y3I0 505 aaKnown RBP16.3■□□□□ 0.2
HNRNPC-206ENST00000553444 PKD1L3Q7Z443 1732 aa16.3■□□□□ 0.2
HNRNPC-206ENST00000553444 MAP2P11137 1827 aaKnown RBP16.29■□□□□ 0.2
HNRNPC-206ENST00000553444 ADRA2BP18089 450 aa16.29■□□□□ 0.2
HNRNPC-206ENST00000553444 SLC4A9Q96Q91 983 aa16.29■□□□□ 0.2
HNRNPC-206ENST00000553444 FCHSD2O94868 740 aa16.28■□□□□ 0.2
HNRNPC-206ENST00000553444 GYS1P13807 737 aa16.28■□□□□ 0.2
HNRNPC-206ENST00000553444 RBM46Q8TBY0 533 aaKnown RBP16.28■□□□□ 0.2
HNRNPC-206ENST00000553444 ARHGEF1Q92888 912 aaKnown RBP16.28■□□□□ 0.2
HNRNPC-206ENST00000553444 CCDC87Q9NVE4 849 aa16.28■□□□□ 0.2
HNRNPC-206ENST00000553444 RC3H1Q5TC82 1133 aaKnown RBP16.27■□□□□ 0.2
HNRNPC-206ENST00000553444 C9orf131Q5VYM1 1079 aa16.27■□□□□ 0.2
HNRNPC-206ENST00000553444 CNTNAP4Q9C0A0 1308 aa16.26■□□□□ 0.19
HNRNPC-206ENST00000553444 KCNA3P22001 575 aa16.26■□□□□ 0.19
HNRNPC-206ENST00000553444 POLKQ9UBT6 870 aa16.26■□□□□ 0.19
HNRNPC-206ENST00000553444 PLEKHG2Q9H7P9 1386 aa16.26■□□□□ 0.19
HNRNPC-206ENST00000553444 ITGB4P16144 1822 aa16.24■□□□□ 0.19
HNRNPC-206ENST00000553444 ERVV-2B6SEH9 535 aa16.24■□□□□ 0.19
HNRNPC-206ENST00000553444 RPS6KA4O75676 772 aa16.24■□□□□ 0.19
HNRNPC-206ENST00000553444 RFC4P35249 363 aa16.24■□□□□ 0.19
HNRNPC-206ENST00000553444 HTRA3P83110 453 aa16.24■□□□□ 0.19
HNRNPC-206ENST00000553444 EIF4A2Q14240 407 aaKnown RBP16.24■□□□□ 0.19
HNRNPC-206ENST00000553444 JMYQ8N9B5 988 aa16.24■□□□□ 0.19
HNRNPC-206ENST00000553444 KLRG1Q96E93 195 aa16.24■□□□□ 0.19
HNRNPC-206ENST00000553444 RBM42Q9BTD8 480 aaKnown RBP16.24■□□□□ 0.19
HNRNPC-206ENST00000553444 PARP3Q9Y6F1 533 aa16.24■□□□□ 0.19
HNRNPC-206ENST00000553444 KIAA1551Q9HCM1 1747 aa16.23■□□□□ 0.19
HNRNPC-206ENST00000553444 FSTL1Q12841 308 aa16.23■□□□□ 0.19
HNRNPC-206ENST00000553444 C16orf71Q8IYS4 520 aaPredicted RBP16.22■□□□□ 0.19
HNRNPC-206ENST00000553444 DCAF5Q96JK2 942 aa16.22■□□□□ 0.19
HNRNPC-206ENST00000553444 HSP90AB1P08238 724 aaKnown RBP16.21■□□□□ 0.19
HNRNPC-206ENST00000553444 COL13A1Q5TAT6 717 aaPredicted RBP16.21■□□□□ 0.19
HNRNPC-206ENST00000553444 PIM2Q9P1W9 311 aa16.21■□□□□ 0.19
HNRNPC-206ENST00000553444 KIF13BQ9NQT8 1826 aa16.2■□□□□ 0.18
HNRNPC-206ENST00000553444 DDR1Q08345 913 aa16.2■□□□□ 0.18
HNRNPC-206ENST00000553444 DALRD3Q5D0E6 543 aaKnown RBP16.2■□□□□ 0.18
HNRNPC-206ENST00000553444 RNF181Q9P0P0 153 aa16.2■□□□□ 0.18
HNRNPC-206ENST00000553444 KDM2BQ8NHM5 1336 aa16.19■□□□□ 0.18
HNRNPC-206ENST00000553444 KDM6AO15550 1401 aaPredicted RBP16.19■□□□□ 0.18
HNRNPC-206ENST00000553444 KIF20BQ96Q89 1820 aa16.19■□□□□ 0.18
HNRNPC-206ENST00000553444 FKBP8Q14318 412 aa16.19■□□□□ 0.18
HNRNPC-206ENST00000553444 SRP68Q9UHB9 627 aaKnown RBP16.19■□□□□ 0.18
HNRNPC-206ENST00000553444 C4AP0C0L4 1744 aa16.19■□□□□ 0.18
HNRNPC-206ENST00000553444 KCPQ6ZWJ8 1503 aa16.19■□□□□ 0.18
HNRNPC-206ENST00000553444 USP42Q9H9J4 1324 aaKnown RBP16.19■□□□□ 0.18
HNRNPC-206ENST00000553444 CABP4P57796 275 aa16.18■□□□□ 0.18
HNRNPC-206ENST00000553444 PLEKHO1Q53GL0 409 aaPredicted RBP16.18■□□□□ 0.18
HNRNPC-206ENST00000553444 ANKRD26Q9UPS8 1709 aa16.17■□□□□ 0.18
HNRNPC-206ENST00000553444 CHRNA5P30532 468 aa16.17■□□□□ 0.18
HNRNPC-206ENST00000553444 CRKLP46109 303 aaKnown RBP16.17■□□□□ 0.18
HNRNPC-206ENST00000553444 ZNF530Q6P9A1 599 aaPredicted RBP16.17■□□□□ 0.18
HNRNPC-206ENST00000553444 RRAGCQ9HB90 399 aa16.17■□□□□ 0.18
HNRNPC-206ENST00000553444 PTCD1O75127 700 aaKnown RBP16.16■□□□□ 0.18
HNRNPC-206ENST00000553444 TNNT2P45379 298 aaPredicted RBP16.16■□□□□ 0.18
HNRNPC-206ENST00000553444 N4BP2Q86UW6 1770 aaPredicted RBP16.15■□□□□ 0.18
HNRNPC-206ENST00000553444 POLRMTO00411 1230 aaKnown RBP16.15■□□□□ 0.18
HNRNPC-206ENST00000553444 AMOTQ4VCS5 1084 aa16.15■□□□□ 0.18
HNRNPC-206ENST00000553444 SMC1BQ8NDV3 1235 aa16.15■□□□□ 0.18
HNRNPC-206ENST00000553444 ZNF831Q5JPB2 1677 aa16.14■□□□□ 0.18
HNRNPC-206ENST00000553444 TM4SF1P30408 202 aa16.13■□□□□ 0.17
HNRNPC-206ENST00000553444 MTHFSP49914 203 aa16.13■□□□□ 0.17
HNRNPC-206ENST00000553444 INTS5Q6P9B9 1019 aaKnown RBP16.13■□□□□ 0.17
HNRNPC-206ENST00000553444 TNS4Q8IZW8 715 aa16.13■□□□□ 0.17
HNRNPC-206ENST00000553444 WDR90Q96KV7 1748 aa16.13■□□□□ 0.17
HNRNPC-206ENST00000553444 ZC3H4Q9UPT8 1303 aaKnown RBP16.13■□□□□ 0.17
HNRNPC-206ENST00000553444 CAPN15O75808 1086 aa16.12■□□□□ 0.17
HNRNPC-206ENST00000553444 RASSF7Q02833 373 aa16.12■□□□□ 0.17
HNRNPC-206ENST00000553444 NFATC2IPQ8NCF5 419 aa16.12■□□□□ 0.17
HNRNPC-206ENST00000553444 C1orf141Q5JVX7 400 aa16.11■□□□□ 0.17
HNRNPC-206ENST00000553444 AEBP1Q8IUX7 1158 aa16.11■□□□□ 0.17
HNRNPC-206ENST00000553444 PRELPP51888 382 aa16.1■□□□□ 0.17
HNRNPC-206ENST00000553444 USPL1Q5W0Q7 1092 aa16.1■□□□□ 0.17
HNRNPC-206ENST00000553444 COL5A3P25940 1745 aaPredicted RBP16.1■□□□□ 0.17
HNRNPC-206ENST00000553444 DNAJC10Q8IXB1 793 aa16.09■□□□□ 0.17
HNRNPC-206ENST00000553444 SOS1Q07889 1333 aaPredicted RBP16.09■□□□□ 0.17
HNRNPC-206ENST00000553444 BRCA1P38398 1863 aaKnown RBP16.09■□□□□ 0.17
HNRNPC-206ENST00000553444 GLTPD2A6NH11 291 aa16.08■□□□□ 0.16
HNRNPC-206ENST00000553444 ZPR1O75312 459 aa16.08■□□□□ 0.16
HNRNPC-206ENST00000553444 LMNB1P20700 586 aa16.08■□□□□ 0.16
HNRNPC-206ENST00000553444 PCNTO95613 3336 aa16.07■□□□□ 0.16
HNRNPC-206ENST00000553444 HSPA1AP0DMV8 641 aaKnown RBP16.07■□□□□ 0.16
HNRNPC-206ENST00000553444 HSPA1BP0DMV9 641 aaKnown RBP16.07■□□□□ 0.16
HNRNPC-206ENST00000553444 VEGFAP15692 232 aaPredicted RBP16.07■□□□□ 0.16
HNRNPC-206ENST00000553444 NFIXQ14938 502 aa16.07■□□□□ 0.16
HNRNPC-206ENST00000553444 MYH14Q7Z406 1995 aaKnown RBP16.06■□□□□ 0.16
HNRNPC-206ENST00000553444 ARFGEF1Q9Y6D6 1849 aa16.06■□□□□ 0.16
HNRNPC-206ENST00000553444 SULT6B1Q6IMI4 303 aa16.06■□□□□ 0.16
HNRNPC-206ENST00000553444 POLR3GLQ9BT43 218 aa16.06■□□□□ 0.16
HNRNPC-206ENST00000553444 CYP19A1P11511 503 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms