RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 ITPRIPQ8IWB1 547 aa24.92■■□□□ 1.58
RBFOX1-215ENST00000553186 DDX19BQ9UMR2 479 aa24.92■■□□□ 1.58
RBFOX1-215ENST00000553186 ZCRB1Q8TBF4 217 aaKnown RBP24.91■■□□□ 1.58
RBFOX1-215ENST00000553186 DCAF5Q96JK2 942 aa24.91■■□□□ 1.58
RBFOX1-215ENST00000553186 PARP4Q9UKK3 1724 aaKnown RBP24.91■■□□□ 1.58
RBFOX1-215ENST00000553186 VIRMAQ69YN4 1812 aaKnown RBP24.91■■□□□ 1.58
RBFOX1-215ENST00000553186 SLC4A2P04920 1241 aa24.91■■□□□ 1.58
RBFOX1-215ENST00000553186 API5Q9BZZ5 524 aaKnown RBP24.91■■□□□ 1.58
RBFOX1-215ENST00000553186 SLC52A2Q9HAB3 445 aa24.9■■□□□ 1.58
RBFOX1-215ENST00000553186 SIPA1L3O60292 1781 aaPredicted RBP24.9■■□□□ 1.58
RBFOX1-215ENST00000553186 CENPQQ7L2Z9 268 aaPredicted RBP24.9■■□□□ 1.58
RBFOX1-215ENST00000553186 HSP90AB1P08238 724 aaKnown RBP24.89■■□□□ 1.58
RBFOX1-215ENST00000553186 CCDC30Q5VVM6 783 aa24.89■■□□□ 1.58
RBFOX1-215ENST00000553186 PCDHB15Q9Y5E8 787 aa24.89■■□□□ 1.58
RBFOX1-215ENST00000553186 SCN11AQ9UI33 1791 aa24.89■■□□□ 1.58
RBFOX1-215ENST00000553186 RGS12O14924 1447 aa24.89■■□□□ 1.57
RBFOX1-215ENST00000553186 HOXB7P09629 217 aa24.88■■□□□ 1.57
RBFOX1-215ENST00000553186 PTPRCP08575 1304 aa24.88■■□□□ 1.57
RBFOX1-215ENST00000553186 PCDH11XQ9BZA7 1347 aa24.88■■□□□ 1.57
RBFOX1-215ENST00000553186 PCDH11YQ9BZA8 1340 aa24.88■■□□□ 1.57
RBFOX1-215ENST00000553186 HEG1Q9ULI3 1381 aa24.87■■□□□ 1.57
RBFOX1-215ENST00000553186 ADAMTS2O95450 1211 aa24.87■■□□□ 1.57
RBFOX1-215ENST00000553186 USP35Q9P2H5 1018 aa24.87■■□□□ 1.57
RBFOX1-215ENST00000553186 MRC1P22897 1456 aa24.87■■□□□ 1.57
RBFOX1-215ENST00000553186 IGHDP01880 384 aa24.86■■□□□ 1.57
RBFOX1-215ENST00000553186 NFATC2IPQ8NCF5 419 aa24.86■■□□□ 1.57
RBFOX1-215ENST00000553186 CERKQ8TCT0 537 aa24.86■■□□□ 1.57
RBFOX1-215ENST00000553186 STK31Q9BXU1 1019 aa24.86■■□□□ 1.57
RBFOX1-215ENST00000553186 ZBTB40Q9NUA8 1239 aa24.86■■□□□ 1.57
RBFOX1-215ENST00000553186 G2E3Q7L622 706 aa24.86■■□□□ 1.57
RBFOX1-215ENST00000553186 NKX1-1Q15270 411 aaPredicted RBP24.84■■□□□ 1.57
RBFOX1-215ENST00000553186 HDGFL1Q5TGJ6 251 aa24.84■■□□□ 1.57
RBFOX1-215ENST00000553186 NECTIN2Q92692 538 aa24.84■■□□□ 1.57
RBFOX1-215ENST00000553186 ZBTB7BO15156 539 aaPredicted RBP24.83■■□□□ 1.57
RBFOX1-215ENST00000553186 NUTM2BA6NNL0 878 aaPredicted RBP24.83■■□□□ 1.56
RBFOX1-215ENST00000553186 NUTM2EB1AL46 878 aaPredicted RBP24.83■■□□□ 1.56
RBFOX1-215ENST00000553186 GIGYF1O75420 1035 aaPredicted RBP24.83■■□□□ 1.56
RBFOX1-215ENST00000553186 ZNF790Q6PG37 636 aa24.83■■□□□ 1.56
RBFOX1-215ENST00000553186 NUTM2AQ8IVF1 878 aaPredicted RBP24.83■■□□□ 1.56
RBFOX1-215ENST00000553186 DISP2A7MBM2 1401 aa24.82■■□□□ 1.56
RBFOX1-215ENST00000553186 INTS3Q68E01 1043 aaKnown RBP24.82■■□□□ 1.56
RBFOX1-215ENST00000553186 TSHZ2Q9NRE2 1034 aa24.81■■□□□ 1.56
RBFOX1-215ENST00000553186 SHANK3Q9BYB0 1731 aa24.81■■□□□ 1.56
RBFOX1-215ENST00000553186 SLC39A6Q13433 755 aa24.8■■□□□ 1.56
RBFOX1-215ENST00000553186 PLCH1Q4KWH8 1693 aa24.8■■□□□ 1.56
RBFOX1-215ENST00000553186 FLIIQ13045 1269 aa24.8■■□□□ 1.56
RBFOX1-215ENST00000553186 EIF2S2P20042 333 aaKnown RBP24.79■■□□□ 1.56
RBFOX1-215ENST00000553186 CABP4P57796 275 aa24.79■■□□□ 1.56
RBFOX1-215ENST00000553186 DDX54Q8TDD1 881 aaKnown RBP24.79■■□□□ 1.56
RBFOX1-215ENST00000553186 CHMP4AQ9BY43 222 aa24.79■■□□□ 1.56
RBFOX1-215ENST00000553186 JCADQ9P266 1359 aa24.78■■□□□ 1.56
RBFOX1-215ENST00000553186 ERVV-2B6SEH9 535 aa24.77■■□□□ 1.56
RBFOX1-215ENST00000553186 CHMP4BQ9H444 224 aaKnown RBP24.77■■□□□ 1.56
RBFOX1-215ENST00000553186 NRAPQ86VF7 1730 aa24.77■■□□□ 1.56
RBFOX1-215ENST00000553186 SLIT2O94813 1529 aa24.77■■□□□ 1.56
RBFOX1-215ENST00000553186 PRAMEF22A3QJZ6 481 aa24.76■■□□□ 1.55
RBFOX1-215ENST00000553186 SKAP1Q86WV1 359 aa24.76■■□□□ 1.55
RBFOX1-215ENST00000553186 CHPF2Q9P2E5 772 aa24.76■■□□□ 1.55
RBFOX1-215ENST00000553186 F6X3S4 739 aa24.75■■□□□ 1.55
RBFOX1-215ENST00000553186 ZNF496Q96IT1 587 aaPredicted RBP24.74■■□□□ 1.55
RBFOX1-215ENST00000553186 RWDD1Q9H446 243 aaPredicted RBP24.74■■□□□ 1.55
RBFOX1-215ENST00000553186 SPATA31A1Q5TZJ5 1347 aa24.74■■□□□ 1.55
RBFOX1-215ENST00000553186 CACNA1FO60840 1977 aa24.74■■□□□ 1.55
RBFOX1-215ENST00000553186 FKBP5Q13451 457 aaPredicted RBP24.74■■□□□ 1.55
RBFOX1-215ENST00000553186 PHAXQ9H814 394 aaKnown RBP24.74■■□□□ 1.55
RBFOX1-215ENST00000553186 HDAC1Q13547 482 aaPredicted RBP24.73■■□□□ 1.55
RBFOX1-215ENST00000553186 DBF4Q9UBU7 674 aaPredicted RBP24.72■■□□□ 1.55
RBFOX1-215ENST00000553186 TTC5Q8N0Z6 440 aa24.71■■□□□ 1.55
RBFOX1-215ENST00000553186 THRAP3Q9Y2W1 955 aaKnown RBP24.71■■□□□ 1.55
RBFOX1-215ENST00000553186 NWD2Q9ULI1 1742 aa24.7■■□□□ 1.54
RBFOX1-215ENST00000553186 CCT4P50991 539 aaKnown RBP24.7■■□□□ 1.54
RBFOX1-215ENST00000553186 SPATA31A5Q5VU36 1347 aa24.7■■□□□ 1.54
RBFOX1-215ENST00000553186 SPATA31A7Q8IWB4 1347 aa24.7■■□□□ 1.54
RBFOX1-215ENST00000553186 SLC4A10Q6U841 1118 aa24.69■■□□□ 1.54
RBFOX1-215ENST00000553186 FMNL2Q96PY5 1086 aa24.69■■□□□ 1.54
RBFOX1-215ENST00000553186 ANXA1P04083 346 aa24.69■■□□□ 1.54
RBFOX1-215ENST00000553186 CDCA7Q9BWT1 371 aaPredicted RBP24.69■■□□□ 1.54
RBFOX1-215ENST00000553186 C1orf115Q9H7X2 142 aa24.69■■□□□ 1.54
RBFOX1-215ENST00000553186 EXOC5O00471 708 aa24.68■■□□□ 1.54
RBFOX1-215ENST00000553186 PROSER3Q2NL68 480 aa24.68■■□□□ 1.54
RBFOX1-215ENST00000553186 SNRPA1P09661 255 aaKnown RBP24.67■■□□□ 1.54
RBFOX1-215ENST00000553186 SPATA31A6Q5VVP1 1343 aa24.67■■□□□ 1.54
RBFOX1-215ENST00000553186 PDIA6Q15084 440 aa24.67■■□□□ 1.54
RBFOX1-215ENST00000553186 TOGARAM1Q9Y4F4 1720 aa24.67■■□□□ 1.54
RBFOX1-215ENST00000553186 WNK3Q9BYP7 1800 aa24.66■■□□□ 1.54
RBFOX1-215ENST00000553186 GLI3P10071 1580 aa24.66■■□□□ 1.54
RBFOX1-215ENST00000553186 TNS2Q63HR2 1409 aa24.66■■□□□ 1.54
RBFOX1-215ENST00000553186 UNC5CLQ8IV45 518 aa24.66■■□□□ 1.54
RBFOX1-215ENST00000553186 MEIS3Q99687 375 aa24.66■■□□□ 1.54
RBFOX1-215ENST00000553186 C5P01031 1676 aa24.65■■□□□ 1.54
RBFOX1-215ENST00000553186 PXDNLA1KZ92 1463 aa24.65■■□□□ 1.54
RBFOX1-215ENST00000553186 C8orf37Q96NL8 207 aa24.65■■□□□ 1.54
RBFOX1-215ENST00000553186 DDX21Q9NR30 783 aaKnown RBP eCLIP24.65■■□□□ 1.54
RBFOX1-215ENST00000553186 BCL9LQ86UU0 1499 aa24.65■■□□□ 1.54
RBFOX1-215ENST00000553186 SIRT2Q8IXJ6 389 aa24.64■■□□□ 1.54
RBFOX1-215ENST00000553186 USP16Q9Y5T5 823 aa24.64■■□□□ 1.54
RBFOX1-215ENST00000553186 BARGINQ6ZT62 677 aa24.64■■□□□ 1.53
RBFOX1-215ENST00000553186 NGLY1Q96IV0 654 aa24.64■■□□□ 1.53
RBFOX1-215ENST00000553186 HYPKQ9NX55 129 aa24.64■■□□□ 1.53
RBFOX1-215ENST00000553186 LRP6O75581 1613 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms