RNA–Protein interactions for RNA: ENST00000552408.1

PRIM1-207, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-207ENST00000552408 WDR44Q5JSH3 913 aa9.04□□□□□ -0.96
PRIM1-207ENST00000552408 TMEM214Q6NUQ4 689 aaKnown RBP9.04□□□□□ -0.96
PRIM1-207ENST00000552408 ACDQ96AP0 544 aa9.04□□□□□ -0.96
PRIM1-207ENST00000552408 COG6Q9Y2V7 657 aa9.04□□□□□ -0.96
PRIM1-207ENST00000552408 H7C1W4 665 aa9.03□□□□□ -0.96
PRIM1-207ENST00000552408 GDF11O95390 407 aa9.03□□□□□ -0.96
PRIM1-207ENST00000552408 USP4Q13107 963 aa9.03□□□□□ -0.96
PRIM1-207ENST00000552408 TMEM151AQ8N4L1 468 aa9.03□□□□□ -0.96
PRIM1-207ENST00000552408 PLPP7Q8NBV4 271 aa9.03□□□□□ -0.96
PRIM1-207ENST00000552408 GMCL1Q96IK5 515 aa9.03□□□□□ -0.96
PRIM1-207ENST00000552408 MARSP56192 900 aaKnown RBP9.02□□□□□ -0.97
PRIM1-207ENST00000552408 TLR1Q15399 786 aa9.02□□□□□ -0.97
PRIM1-207ENST00000552408 FOXR1Q6PIV2 292 aa9.02□□□□□ -0.97
PRIM1-207ENST00000552408 MX2P20592 715 aa9.01□□□□□ -0.97
PRIM1-207ENST00000552408 MSX1P28360 303 aa9.01□□□□□ -0.97
PRIM1-207ENST00000552408 MAP3K10Q02779 954 aa9.01□□□□□ -0.97
PRIM1-207ENST00000552408 UBAP2LQ14157 1087 aaKnown RBP9.01□□□□□ -0.97
PRIM1-207ENST00000552408 GNASQ5JWF2 1037 aa9.01□□□□□ -0.97
PRIM1-207ENST00000552408 TRERF1Q96PN7 1200 aa9.01□□□□□ -0.97
PRIM1-207ENST00000552408 GDF10P55107 478 aa9□□□□□ -0.97
PRIM1-207ENST00000552408 SEMA3FQ13275 785 aa9□□□□□ -0.97
PRIM1-207ENST00000552408 ESCO1Q5FWF5 840 aa9□□□□□ -0.97
PRIM1-207ENST00000552408 SERTAD1Q9UHV2 236 aa9□□□□□ -0.97
PRIM1-207ENST00000552408 USP3Q9Y6I4 520 aa9□□□□□ -0.97
PRIM1-207ENST00000552408 A0A1B0GTH6 734 aa8.99□□□□□ -0.97
PRIM1-207ENST00000552408 PLA2G4AP47712 749 aa8.99□□□□□ -0.97
PRIM1-207ENST00000552408 WASHC4Q2M389 1173 aa8.99□□□□□ -0.97
PRIM1-207ENST00000552408 CNTNAP5Q8WYK1 1306 aa8.99□□□□□ -0.97
PRIM1-207ENST00000552408 INHAP05111 366 aa8.98□□□□□ -0.97
PRIM1-207ENST00000552408 PPARGC1BQ86YN6 1023 aaKnown RBP8.98□□□□□ -0.97
PRIM1-207ENST00000552408 RHBDD1Q8TEB9 315 aa8.98□□□□□ -0.97
PRIM1-207ENST00000552408 TMEM229AB2RXF0 380 aa8.97□□□□□ -0.97
PRIM1-207ENST00000552408 RNF225M0QZC1 329 aaPredicted RBP8.97□□□□□ -0.97
PRIM1-207ENST00000552408 BCRP11274 1271 aa8.97□□□□□ -0.97
PRIM1-207ENST00000552408 POM121CA8CG34 1229 aa8.96□□□□□ -0.98
PRIM1-207ENST00000552408 GTF2E1P29083 439 aaPredicted RBP8.96□□□□□ -0.98
PRIM1-207ENST00000552408 C1orf229Q6ZS94 237 aaPredicted RBP8.96□□□□□ -0.98
PRIM1-207ENST00000552408 ABHD17AQ96GS6 310 aa8.96□□□□□ -0.98
PRIM1-207ENST00000552408 C2CD2LO14523 706 aa8.95□□□□□ -0.98
PRIM1-207ENST00000552408 NEDD1Q8NHV4 660 aa8.95□□□□□ -0.98
PRIM1-207ENST00000552408 HCN2Q9UL51 889 aa8.95□□□□□ -0.98
PRIM1-207ENST00000552408 SKIP12755 728 aa8.94□□□□□ -0.98
PRIM1-207ENST00000552408 ATP4AP20648 1035 aa8.94□□□□□ -0.98
PRIM1-207ENST00000552408 MAP7D1Q3KQU3 841 aa8.94□□□□□ -0.98
PRIM1-207ENST00000552408 ZNF295-AS1Q8N0V1 137 aa8.94□□□□□ -0.98
PRIM1-207ENST00000552408 DEPDC4Q8N2C3 294 aa8.94□□□□□ -0.98
PRIM1-207ENST00000552408 ADAMTS19Q8TE59 1207 aa8.94□□□□□ -0.98
PRIM1-207ENST00000552408 KLRG1Q96E93 195 aa8.94□□□□□ -0.98
PRIM1-207ENST00000552408 SCARF2Q96GP6 870 aaPredicted RBP8.94□□□□□ -0.98
PRIM1-207ENST00000552408 ALG2Q9H553 416 aa8.94□□□□□ -0.98
PRIM1-207ENST00000552408 PCDHGA11Q9Y5H2 935 aa8.94□□□□□ -0.98
PRIM1-207ENST00000552408 SHISA8B8ZZ34 492 aa8.93□□□□□ -0.98
PRIM1-207ENST00000552408 BNIP3LO60238 219 aa8.93□□□□□ -0.98
PRIM1-207ENST00000552408 CSB-PGBD3P0DP91 1061 aa8.93□□□□□ -0.98
PRIM1-207ENST00000552408 SMTNP53814 917 aa8.93□□□□□ -0.98
PRIM1-207ENST00000552408 CTBSQ01459 385 aa8.93□□□□□ -0.98
PRIM1-207ENST00000552408 PGBD3Q8N328 593 aa8.93□□□□□ -0.98
PRIM1-207ENST00000552408 AIDAQ96BJ3 306 aa8.93□□□□□ -0.98
PRIM1-207ENST00000552408 SIRT1Q96EB6 747 aa8.93□□□□□ -0.98
PRIM1-207ENST00000552408 CFHR5Q9BXR6 569 aa8.93□□□□□ -0.98
PRIM1-207ENST00000552408 OXCT2Q9BYC2 517 aaPredicted RBP8.93□□□□□ -0.98
PRIM1-207ENST00000552408 PARP3Q9Y6F1 533 aa8.93□□□□□ -0.98
PRIM1-207ENST00000552408 GPAT2Q6NUI2 795 aa8.92□□□□□ -0.98
PRIM1-207ENST00000552408 NDFIP2Q9NV92 336 aa8.92□□□□□ -0.98
PRIM1-207ENST00000552408 DNAAF2Q9NVR5 837 aaKnown RBP8.92□□□□□ -0.98
PRIM1-207ENST00000552408 OIP5O43482 229 aa8.91□□□□□ -0.98
PRIM1-207ENST00000552408 SOX11P35716 441 aa8.91□□□□□ -0.98
PRIM1-207ENST00000552408 SNRPNP63162 240 aaKnown RBP8.91□□□□□ -0.98
PRIM1-207ENST00000552408 EFHC2Q5JST6 749 aa8.91□□□□□ -0.98
PRIM1-207ENST00000552408 TBC1D9Q6ZT07 1266 aa8.91□□□□□ -0.98
PRIM1-207ENST00000552408 ENAMQ9NRM1 1142 aa8.91□□□□□ -0.98
PRIM1-207ENST00000552408 IQSEC3Q9UPP2 1182 aaPredicted RBP8.91□□□□□ -0.98
PRIM1-207ENST00000552408 NCOA4Q13772 614 aa8.9□□□□□ -0.98
PRIM1-207ENST00000552408 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.9□□□□□ -0.98
PRIM1-207ENST00000552408 ZCCHC2Q9C0B9 1178 aaKnown RBP8.9□□□□□ -0.98
PRIM1-207ENST00000552408 CRISPLD1Q9H336 500 aa8.9□□□□□ -0.98
PRIM1-207ENST00000552408 DNMT3AQ9Y6K1 912 aaPredicted RBP8.9□□□□□ -0.98
PRIM1-207ENST00000552408 A6NJY4 79 aa8.89□□□□□ -0.99
PRIM1-207ENST00000552408 ITGB2P05107 769 aa8.89□□□□□ -0.99
PRIM1-207ENST00000552408 FGFR3P22607 806 aa8.89□□□□□ -0.99
PRIM1-207ENST00000552408 MAP2K3P46734 347 aa8.89□□□□□ -0.99
PRIM1-207ENST00000552408 GTF2IP78347 998 aa8.89□□□□□ -0.99
PRIM1-207ENST00000552408 TBCELQ5QJ74 424 aa8.89□□□□□ -0.99
PRIM1-207ENST00000552408 KANK3Q6NY19 840 aa8.89□□□□□ -0.99
PRIM1-207ENST00000552408 GALNT6Q8NCL4 622 aa8.89□□□□□ -0.99
PRIM1-207ENST00000552408 NIFKQ9BYG3 293 aaKnown RBP8.89□□□□□ -0.99
PRIM1-207ENST00000552408 NSFL1CQ9UNZ2 370 aaKnown RBP8.89□□□□□ -0.99
PRIM1-207ENST00000552408 PHF24Q9UPV7 400 aa8.89□□□□□ -0.99
PRIM1-207ENST00000552408 DCDC2BA2VCK2 349 aa8.88□□□□□ -0.99
PRIM1-207ENST00000552408 BMP4P12644 408 aa8.88□□□□□ -0.99
PRIM1-207ENST00000552408 SUZ12Q15022 739 aaKnown RBP8.88□□□□□ -0.99
PRIM1-207ENST00000552408 EML3Q32P44 896 aa8.88□□□□□ -0.99
PRIM1-207ENST00000552408 SLC4A9Q96Q91 983 aa8.88□□□□□ -0.99
PRIM1-207ENST00000552408 CABP1Q9NZU7 370 aa8.88□□□□□ -0.99
PRIM1-207ENST00000552408 ATXN7L1Q9ULK2 861 aaPredicted RBP8.88□□□□□ -0.99
PRIM1-207ENST00000552408 A0A1W2PNR3 127 aa8.87□□□□□ -0.99
PRIM1-207ENST00000552408 USP17L5A8MUK1 530 aa8.87□□□□□ -0.99
PRIM1-207ENST00000552408 PSME1Q06323 249 aa8.87□□□□□ -0.99
PRIM1-207ENST00000552408 LBRQ14739 615 aaKnown RBP8.87□□□□□ -0.99
PRIM1-207ENST00000552408 MTFR1Q15390 333 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms