RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 DCAF5Q96JK2 942 aa31.41■■■□□ 2.62
TROAP-216ENST00000551567 CHD4Q14839 1912 aa31.4■■■□□ 2.62
TROAP-216ENST00000551567 PER1O15534 1290 aaPredicted RBP31.4■■■□□ 2.62
TROAP-216ENST00000551567 ITPK1Q13572 414 aa31.4■■■□□ 2.62
TROAP-216ENST00000551567 KDRP35968 1356 aa31.4■■■□□ 2.62
TROAP-216ENST00000551567 ERVV-2B6SEH9 535 aa31.39■■■□□ 2.62
TROAP-216ENST00000551567 ATP6V1AP38606 617 aa31.39■■■□□ 2.62
TROAP-216ENST00000551567 NLGN2Q8NFZ4 835 aa31.39■■■□□ 2.62
TROAP-216ENST00000551567 MTHFSP49914 203 aa31.38■■■□□ 2.61
TROAP-216ENST00000551567 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.37■■■□□ 2.61
TROAP-216ENST00000551567 C1orf141Q5JVX7 400 aa31.37■■■□□ 2.61
TROAP-216ENST00000551567 GPR162Q16538 588 aa31.36■■■□□ 2.61
TROAP-216ENST00000551567 ZNF831Q5JPB2 1677 aa31.35■■■□□ 2.61
TROAP-216ENST00000551567 CNGB1Q14028 1251 aaPredicted RBP31.35■■■□□ 2.61
TROAP-216ENST00000551567 PELP1Q8IZL8 1130 aaKnown RBP31.35■■■□□ 2.61
TROAP-216ENST00000551567 GNPATO15228 680 aa31.34■■■□□ 2.61
TROAP-216ENST00000551567 CABP4P57796 275 aa31.34■■■□□ 2.61
TROAP-216ENST00000551567 SCN11AQ9UI33 1791 aa31.34■■■□□ 2.61
TROAP-216ENST00000551567 COL5A3P25940 1745 aaPredicted RBP31.34■■■□□ 2.61
TROAP-216ENST00000551567 SSFA2P28290 1259 aa31.33■■■□□ 2.61
TROAP-216ENST00000551567 RBM42Q9BTD8 480 aaKnown RBP31.33■■■□□ 2.61
TROAP-216ENST00000551567 SLC4A9Q96Q91 983 aa31.31■■■□□ 2.6
TROAP-216ENST00000551567 GOLGB1Q14789 3259 aaKnown RBP31.31■■■□□ 2.6
TROAP-216ENST00000551567 HMOX1P09601 288 aa31.3■■■□□ 2.6
TROAP-216ENST00000551567 VIRMAQ69YN4 1812 aaKnown RBP31.3■■■□□ 2.6
TROAP-216ENST00000551567 NPC1L1Q9UHC9 1359 aa31.27■■■□□ 2.6
TROAP-216ENST00000551567 DIAPH1O60610 1272 aaKnown RBP31.26■■■□□ 2.59
TROAP-216ENST00000551567 NFATC2IPQ8NCF5 419 aa31.26■■■□□ 2.59
TROAP-216ENST00000551567 COL3A1P02461 1466 aaPredicted RBP31.24■■■□□ 2.59
TROAP-216ENST00000551567 PTCD1O75127 700 aaKnown RBP31.23■■■□□ 2.59
TROAP-216ENST00000551567 AKAP4Q5JQC9 854 aa31.23■■■□□ 2.59
TROAP-216ENST00000551567 CD2APQ9Y5K6 639 aa31.23■■■□□ 2.59
TROAP-216ENST00000551567 TJP1Q07157 1748 aa31.23■■■□□ 2.59
TROAP-216ENST00000551567 ZNF784Q8NCA9 323 aaPredicted RBP31.22■■■□□ 2.59
TROAP-216ENST00000551567 RTCBQ9Y3I0 505 aaKnown RBP31.22■■■□□ 2.59
TROAP-216ENST00000551567 MYH14Q7Z406 1995 aaKnown RBP31.22■■■□□ 2.59
TROAP-216ENST00000551567 YBX3P16989 372 aaKnown RBP eCLIP31.21■■■□□ 2.598e-8■□□□□ 11.3
TROAP-216ENST00000551567 C4AP0C0L4 1744 aa31.2■■■□□ 2.58
TROAP-216ENST00000551567 CNTNAP4Q9C0A0 1308 aa31.2■■■□□ 2.58
TROAP-216ENST00000551567 CICQ96RK0 1608 aaPredicted RBP31.19■■■□□ 2.58
TROAP-216ENST00000551567 TRAPPC3LQ5T215 181 aa31.18■■■□□ 2.58
TROAP-216ENST00000551567 RC3H1Q5TC82 1133 aaKnown RBP31.18■■■□□ 2.58
TROAP-216ENST00000551567 LGR6Q9HBX8 967 aa31.18■■■□□ 2.58
TROAP-216ENST00000551567 MRC1P22897 1456 aa31.18■■■□□ 2.58
TROAP-216ENST00000551567 ADAMTS7Q9UKP4 1686 aa31.16■■■□□ 2.58
TROAP-216ENST00000551567 MTHFSDQ2M296 383 aaKnown RBP31.16■■■□□ 2.58
TROAP-216ENST00000551567 SLC52A2Q9HAB3 445 aa31.16■■■□□ 2.58
TROAP-216ENST00000551567 U2SURPO15042 1029 aaKnown RBP31.15■■■□□ 2.58
TROAP-216ENST00000551567 RNMTO43148 476 aaKnown RBP31.14■■■□□ 2.58
TROAP-216ENST00000551567 ARHGEF1Q92888 912 aaKnown RBP31.14■■■□□ 2.58
TROAP-216ENST00000551567 GRIN3BO60391 1043 aa31.13■■■□□ 2.57
TROAP-216ENST00000551567 RPS6KA4O75676 772 aa31.13■■■□□ 2.57
TROAP-216ENST00000551567 MMP10P09238 476 aa31.13■■■□□ 2.57
TROAP-216ENST00000551567 ADRA2BP18089 450 aa31.13■■■□□ 2.57
TROAP-216ENST00000551567 CRKLP46109 303 aaKnown RBP31.12■■■□□ 2.57
TROAP-216ENST00000551567 RFC4P35249 363 aa31.1■■■□□ 2.57
TROAP-216ENST00000551567 WWC3Q9ULE0 1092 aa31.1■■■□□ 2.57
TROAP-216ENST00000551567 SLC39A6Q13433 755 aa31.09■■■□□ 2.57
TROAP-216ENST00000551567 KIF13BQ9NQT8 1826 aa31.09■■■□□ 2.57
TROAP-216ENST00000551567 NLGN1Q8N2Q7 840 aa31.08■■■□□ 2.57
TROAP-216ENST00000551567 KCPQ6ZWJ8 1503 aa31.08■■■□□ 2.57
TROAP-216ENST00000551567 GYS1P13807 737 aa31.07■■■□□ 2.56
TROAP-216ENST00000551567 DNAJC10Q8IXB1 793 aa31.06■■■□□ 2.56
TROAP-216ENST00000551567 KIAA1551Q9HCM1 1747 aa31.06■■■□□ 2.56
TROAP-216ENST00000551567 UBR2Q8IWV8 1755 aa31.05■■■□□ 2.56
TROAP-216ENST00000551567 N4BP2Q86UW6 1770 aaPredicted RBP31.05■■■□□ 2.56
TROAP-216ENST00000551567 CFAP53Q96M91 514 aa31.04■■■□□ 2.56
TROAP-216ENST00000551567 SRP68Q9UHB9 627 aaKnown RBP31.03■■■□□ 2.56
TROAP-216ENST00000551567 INTS5Q6P9B9 1019 aaKnown RBP31.02■■■□□ 2.56
TROAP-216ENST00000551567 PXDNLA1KZ92 1463 aa31.01■■■□□ 2.56
TROAP-216ENST00000551567 C10orf71Q711Q0 1435 aa31.01■■■□□ 2.55
TROAP-216ENST00000551567 CCDC87Q9NVE4 849 aa31.01■■■□□ 2.55
TROAP-216ENST00000551567 SIPA1L3O60292 1781 aaPredicted RBP31.01■■■□□ 2.55
TROAP-216ENST00000551567 GAS2L2Q8NHY3 880 aa31■■■□□ 2.55
TROAP-216ENST00000551567 USP42Q9H9J4 1324 aaKnown RBP30.99■■■□□ 2.55
TROAP-216ENST00000551567 PPP2R1AP30153 589 aa30.99■■■□□ 2.55
TROAP-216ENST00000551567 PARP3Q9Y6F1 533 aa30.99■■■□□ 2.55
TROAP-216ENST00000551567 GNAT3A8MTJ3 354 aa30.98■■■□□ 2.55
TROAP-216ENST00000551567 CYP19A1P11511 503 aaPredicted RBP30.97■■■□□ 2.55
TROAP-216ENST00000551567 PRKAR2BP31323 418 aa30.97■■■□□ 2.55
TROAP-216ENST00000551567 TEFQ10587 303 aa30.96■■■□□ 2.55
TROAP-216ENST00000551567 FKBP8Q14318 412 aa30.96■■■□□ 2.55
TROAP-216ENST00000551567 IL17REQ8NFR9 667 aa30.96■■■□□ 2.55
TROAP-216ENST00000551567 TTC5Q8N0Z6 440 aa30.95■■■□□ 2.55
TROAP-216ENST00000551567 PHACTR3Q96KR7 559 aa30.95■■■□□ 2.55
TROAP-216ENST00000551567 RSPH6AQ9H0K4 717 aa30.95■■■□□ 2.55
TROAP-216ENST00000551567 SOS1Q07889 1333 aaPredicted RBP30.95■■■□□ 2.54
TROAP-216ENST00000551567 NUDCQ9Y266 331 aa30.94■■■□□ 2.54
TROAP-216ENST00000551567 ZBTB1Q9Y2K1 713 aa30.93■■■□□ 2.54
TROAP-216ENST00000551567 A0A0G2JLW4 131 aa30.92■■■□□ 2.54
TROAP-216ENST00000551567 TGFB2P61812 414 aa30.92■■■□□ 2.54
TROAP-216ENST00000551567 VSIG10Q8N0Z9 540 aa30.92■■■□□ 2.54
TROAP-216ENST00000551567 BRCA1P38398 1863 aaKnown RBP30.92■■■□□ 2.54
TROAP-216ENST00000551567 COL15A1P39059 1388 aa30.92■■■□□ 2.54
TROAP-216ENST00000551567 ATP10DQ9P241 1426 aa30.91■■■□□ 2.54
TROAP-216ENST00000551567 U2AF1L5P0DN76 240 aaPredicted RBP30.91■■■□□ 2.54
TROAP-216ENST00000551567 U2AF1Q01081 240 aaKnown RBP eCLIP30.91■■■□□ 2.54
TROAP-216ENST00000551567 DDR1Q08345 913 aa30.91■■■□□ 2.54
TROAP-216ENST00000551567 ZPR1O75312 459 aa30.9■■■□□ 2.54
TROAP-216ENST00000551567 USPL1Q5W0Q7 1092 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms