RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 KDM6AO15550 1401 aaPredicted RBP15.89■□□□□ 0.13
PRPF40B-212ENST00000551111 CCER1Q8TC90 406 aaPredicted RBP15.89■□□□□ 0.13
PRPF40B-212ENST00000551111 N4BP2Q86UW6 1770 aaPredicted RBP15.89■□□□□ 0.13
PRPF40B-212ENST00000551111 SCN11AQ9UI33 1791 aa15.88■□□□□ 0.13
PRPF40B-212ENST00000551111 GNPATO15228 680 aa15.88■□□□□ 0.13
PRPF40B-212ENST00000551111 CD2APQ9Y5K6 639 aa15.88■□□□□ 0.13
PRPF40B-212ENST00000551111 KIAA1551Q9HCM1 1747 aa15.88■□□□□ 0.13
PRPF40B-212ENST00000551111 KDRP35968 1356 aa15.87■□□□□ 0.13
PRPF40B-212ENST00000551111 ZNF831Q5JPB2 1677 aa15.87■□□□□ 0.13
PRPF40B-212ENST00000551111 SSFA2P28290 1259 aa15.87■□□□□ 0.13
PRPF40B-212ENST00000551111 C1QTNF8P60827 252 aa15.87■□□□□ 0.13
PRPF40B-212ENST00000551111 MORC1Q86VD1 984 aa15.87■□□□□ 0.13
PRPF40B-212ENST00000551111 C4AP0C0L4 1744 aa15.87■□□□□ 0.13
PRPF40B-212ENST00000551111 KIF13BQ9NQT8 1826 aa15.87■□□□□ 0.13
PRPF40B-212ENST00000551111 ZNF530Q6P9A1 599 aaPredicted RBP15.86■□□□□ 0.13
PRPF40B-212ENST00000551111 RBM42Q9BTD8 480 aaKnown RBP15.85■□□□□ 0.13
PRPF40B-212ENST00000551111 ERVV-2B6SEH9 535 aa15.84■□□□□ 0.13
PRPF40B-212ENST00000551111 GRIN3BO60391 1043 aa15.84■□□□□ 0.13
PRPF40B-212ENST00000551111 PLEKHO1Q53GL0 409 aaPredicted RBP15.84■□□□□ 0.13
PRPF40B-212ENST00000551111 AMER1Q5JTC6 1135 aaPredicted RBP15.84■□□□□ 0.13
PRPF40B-212ENST00000551111 SULT6B1Q6IMI4 303 aa15.84■□□□□ 0.13
PRPF40B-212ENST00000551111 DCAF5Q96JK2 942 aa15.84■□□□□ 0.13
PRPF40B-212ENST00000551111 TJP1Q07157 1748 aa15.84■□□□□ 0.13
PRPF40B-212ENST00000551111 IL13P35225 146 aa15.83■□□□□ 0.12
PRPF40B-212ENST00000551111 MMP10P09238 476 aa15.82■□□□□ 0.12
PRPF40B-212ENST00000551111 ARHGEF1Q92888 912 aaKnown RBP15.82■□□□□ 0.12
PRPF40B-212ENST00000551111 KIF7Q2M1P5 1343 aa15.82■□□□□ 0.12
PRPF40B-212ENST00000551111 CICQ96RK0 1608 aaPredicted RBP15.82■□□□□ 0.12
PRPF40B-212ENST00000551111 BRCA1P38398 1863 aaKnown RBP15.82■□□□□ 0.12
PRPF40B-212ENST00000551111 SENP3-EIF4A1A0A087X0R7 540 aa15.81■□□□□ 0.12
PRPF40B-212ENST00000551111 PTCD1O75127 700 aaKnown RBP15.81■□□□□ 0.12
PRPF40B-212ENST00000551111 MTHFSP49914 203 aa15.81■□□□□ 0.12
PRPF40B-212ENST00000551111 CABP4P57796 275 aa15.81■□□□□ 0.12
PRPF40B-212ENST00000551111 NFATC2IPQ8NCF5 419 aa15.81■□□□□ 0.12
PRPF40B-212ENST00000551111 PLEKHG2Q9H7P9 1386 aa15.81■□□□□ 0.12
PRPF40B-212ENST00000551111 KNSTRNQ9Y448 316 aa15.81■□□□□ 0.12
PRPF40B-212ENST00000551111 ATP10DQ9P241 1426 aa15.8■□□□□ 0.12
PRPF40B-212ENST00000551111 HMGB2P26583 209 aaKnown RBP15.8■□□□□ 0.12
PRPF40B-212ENST00000551111 AMOTQ4VCS5 1084 aa15.8■□□□□ 0.12
PRPF40B-212ENST00000551111 TRAPPC3LQ5T215 181 aa15.8■□□□□ 0.12
PRPF40B-212ENST00000551111 RTCBQ9Y3I0 505 aaKnown RBP15.8■□□□□ 0.12
PRPF40B-212ENST00000551111 ADAMTS7Q9UKP4 1686 aa15.79■□□□□ 0.12
PRPF40B-212ENST00000551111 CEP350Q5VT06 3117 aa15.79■□□□□ 0.12
PRPF40B-212ENST00000551111 PER1O15534 1290 aaPredicted RBP15.79■□□□□ 0.12
PRPF40B-212ENST00000551111 GIGYF1O75420 1035 aaPredicted RBP15.79■□□□□ 0.12
PRPF40B-212ENST00000551111 HSP90AB1P08238 724 aaKnown RBP15.79■□□□□ 0.12
PRPF40B-212ENST00000551111 LGR6Q9HBX8 967 aa15.79■□□□□ 0.12
PRPF40B-212ENST00000551111 RPS6KA4O75676 772 aa15.78■□□□□ 0.12
PRPF40B-212ENST00000551111 HMOX1P09601 288 aa15.78■□□□□ 0.12
PRPF40B-212ENST00000551111 GYS1P13807 737 aa15.78■□□□□ 0.12
PRPF40B-212ENST00000551111 RC3H1Q5TC82 1133 aaKnown RBP15.78■□□□□ 0.12
PRPF40B-212ENST00000551111 PXDNLA1KZ92 1463 aa15.78■□□□□ 0.12
PRPF40B-212ENST00000551111 ADCY9O60503 1353 aa15.77■□□□□ 0.12
PRPF40B-212ENST00000551111 CNTNAP4Q9C0A0 1308 aa15.77■□□□□ 0.12
PRPF40B-212ENST00000551111 C1orf141Q5JVX7 400 aa15.77■□□□□ 0.12
PRPF40B-212ENST00000551111 ZNF526Q8TF50 670 aaPredicted RBP15.77■□□□□ 0.12
PRPF40B-212ENST00000551111 SRP68Q9UHB9 627 aaKnown RBP15.77■□□□□ 0.12
PRPF40B-212ENST00000551111 A0A0G2JLW4 131 aa15.76■□□□□ 0.11
PRPF40B-212ENST00000551111 CRKLP46109 303 aaKnown RBP15.76■□□□□ 0.11
PRPF40B-212ENST00000551111 CNGB1Q14028 1251 aaPredicted RBP15.76■□□□□ 0.11
PRPF40B-212ENST00000551111 CC2D1BQ5T0F9 858 aaKnown RBP15.76■□□□□ 0.11
PRPF40B-212ENST00000551111 AFDNP55196 1824 aaKnown RBP15.75■□□□□ 0.11
PRPF40B-212ENST00000551111 RFC4P35249 363 aa15.74■□□□□ 0.11
PRPF40B-212ENST00000551111 SLC39A6Q13433 755 aa15.74■□□□□ 0.11
PRPF40B-212ENST00000551111 INTS5Q6P9B9 1019 aaKnown RBP15.74■□□□□ 0.11
PRPF40B-212ENST00000551111 NLGN1Q8N2Q7 840 aa15.74■□□□□ 0.11
PRPF40B-212ENST00000551111 C10orf71Q711Q0 1435 aa15.74■□□□□ 0.11
PRPF40B-212ENST00000551111 ARFGEF1Q9Y6D6 1849 aa15.73■□□□□ 0.11
PRPF40B-212ENST00000551111 DPEP1P16444 411 aa15.73■□□□□ 0.11
PRPF40B-212ENST00000551111 ADRA2BP18089 450 aa15.73■□□□□ 0.11
PRPF40B-212ENST00000551111 FKBP8Q14318 412 aa15.73■□□□□ 0.11
PRPF40B-212ENST00000551111 DNAJC10Q8IXB1 793 aa15.73■□□□□ 0.11
PRPF40B-212ENST00000551111 RNMTO43148 476 aaKnown RBP15.72■□□□□ 0.11
PRPF40B-212ENST00000551111 KCNA3P22001 575 aa15.72■□□□□ 0.11
PRPF40B-212ENST00000551111 DDR1Q08345 913 aa15.72■□□□□ 0.11
PRPF40B-212ENST00000551111 MTHFSDQ2M296 383 aaKnown RBP15.72■□□□□ 0.11
PRPF40B-212ENST00000551111 AKAP4Q5JQC9 854 aa15.72■□□□□ 0.11
PRPF40B-212ENST00000551111 SLC52A2Q9HAB3 445 aa15.71■□□□□ 0.11
PRPF40B-212ENST00000551111 GPBP1L1Q9HC44 474 aaPredicted RBP15.71■□□□□ 0.11
PRPF40B-212ENST00000551111 BCS1LQ9Y276 419 aa15.71■□□□□ 0.11
PRPF40B-212ENST00000551111 KCPQ6ZWJ8 1503 aa15.71■□□□□ 0.11
PRPF40B-212ENST00000551111 UBR2Q8IWV8 1755 aa15.71■□□□□ 0.11
PRPF40B-212ENST00000551111 SBF1O95248 1867 aa15.71■□□□□ 0.11
PRPF40B-212ENST00000551111 COL3A1P02461 1466 aaPredicted RBP15.71■□□□□ 0.1
PRPF40B-212ENST00000551111 MRC1P22897 1456 aa15.71■□□□□ 0.1
PRPF40B-212ENST00000551111 SIPA1L3O60292 1781 aaPredicted RBP15.7■□□□□ 0.1
PRPF40B-212ENST00000551111 TGFB2P61812 414 aa15.7■□□□□ 0.1
PRPF40B-212ENST00000551111 PARP3Q9Y6F1 533 aa15.7■□□□□ 0.1
PRPF40B-212ENST00000551111 USP42Q9H9J4 1324 aaKnown RBP15.69■□□□□ 0.1
PRPF40B-212ENST00000551111 DIAPH1O60610 1272 aaKnown RBP15.69■□□□□ 0.1
PRPF40B-212ENST00000551111 CCDC87Q9NVE4 849 aa15.69■□□□□ 0.1
PRPF40B-212ENST00000551111 CCDC88AQ3V6T2 1871 aa15.69■□□□□ 0.1
PRPF40B-212ENST00000551111 CYP19A1P11511 503 aaPredicted RBP15.68■□□□□ 0.1
PRPF40B-212ENST00000551111 SOS1Q07889 1333 aaPredicted RBP15.67■□□□□ 0.1
PRPF40B-212ENST00000551111 POLRMTO00411 1230 aaKnown RBP15.66■□□□□ 0.1
PRPF40B-212ENST00000551111 KIF3CO14782 793 aa15.66■□□□□ 0.1
PRPF40B-212ENST00000551111 FCHSD2O94868 740 aa15.66■□□□□ 0.1
PRPF40B-212ENST00000551111 TM4SF1P30408 202 aa15.66■□□□□ 0.1
PRPF40B-212ENST00000551111 CHRNA5P30532 468 aa15.66■□□□□ 0.1
PRPF40B-212ENST00000551111 USPL1Q5W0Q7 1092 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms