RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 C8orf37Q96NL8 207 aa9.52□□□□□ -0.88
TGFBR1-208ENST00000550253 LINC01559Q495D7 138 aa9.51□□□□□ -0.89
TGFBR1-208ENST00000550253 RGL4Q8IZJ4 473 aa9.51□□□□□ -0.89
TGFBR1-208ENST00000550253 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.51□□□□□ -0.89
TGFBR1-208ENST00000550253 TDRD9Q8NDG6 1382 aaKnown RBP9.51□□□□□ -0.89
TGFBR1-208ENST00000550253 SNAPC4Q5SXM2 1469 aa9.51□□□□□ -0.89
TGFBR1-208ENST00000550253 NPR3P17342 541 aa9.51□□□□□ -0.89
TGFBR1-208ENST00000550253 TRMT44Q8IYL2 757 aaKnown RBP9.51□□□□□ -0.89
TGFBR1-208ENST00000550253 WDR97A6NE52 1622 aa9.51□□□□□ -0.89
TGFBR1-208ENST00000550253 GAS2L2Q8NHY3 880 aa9.5□□□□□ -0.89
TGFBR1-208ENST00000550253 HELQQ8TDG4 1101 aa9.5□□□□□ -0.89
TGFBR1-208ENST00000550253 ZNF358Q9NW07 568 aa9.5□□□□□ -0.89
TGFBR1-208ENST00000550253 CDV3Q9UKY7 258 aaKnown RBP9.5□□□□□ -0.89
TGFBR1-208ENST00000550253 EAPPQ56P03 285 aaPredicted RBP9.49□□□□□ -0.89
TGFBR1-208ENST00000550253 SLC6A16Q9GZN6 736 aa9.49□□□□□ -0.89
TGFBR1-208ENST00000550253 FGD5Q6ZNL6 1462 aa9.49□□□□□ -0.89
TGFBR1-208ENST00000550253 CUX1P39880 1505 aa9.49□□□□□ -0.89
TGFBR1-208ENST00000550253 IGFBP4P22692 258 aa9.48□□□□□ -0.89
TGFBR1-208ENST00000550253 NAA30Q147X3 362 aaPredicted RBP9.48□□□□□ -0.89
TGFBR1-208ENST00000550253 SOGA1O94964 1423 aa9.48□□□□□ -0.89
TGFBR1-208ENST00000550253 TMEM229AB2RXF0 380 aa9.47□□□□□ -0.89
TGFBR1-208ENST00000550253 ANKRD13DQ6ZTN6 518 aa9.47□□□□□ -0.89
TGFBR1-208ENST00000550253 MTRQ99707 1265 aa9.47□□□□□ -0.89
TGFBR1-208ENST00000550253 PBRM1Q86U86 1689 aa9.47□□□□□ -0.89
TGFBR1-208ENST00000550253 FOXO3O43524 673 aa9.46□□□□□ -0.89
TGFBR1-208ENST00000550253 MYCP01106 439 aaPredicted RBP9.46□□□□□ -0.89
TGFBR1-208ENST00000550253 SCTRP47872 440 aa9.46□□□□□ -0.89
TGFBR1-208ENST00000550253 RBCK1Q9BYM8 510 aa9.46□□□□□ -0.89
TGFBR1-208ENST00000550253 FAM13AO94988 1023 aa9.46□□□□□ -0.9
TGFBR1-208ENST00000550253 ZC3H6P61129 1189 aaKnown RBP9.46□□□□□ -0.9
TGFBR1-208ENST00000550253 THSD4Q6ZMP0 1018 aa9.46□□□□□ -0.9
TGFBR1-208ENST00000550253 DRC1Q96MC2 740 aa9.46□□□□□ -0.9
TGFBR1-208ENST00000550253 SYNJ1O43426 1573 aa9.46□□□□□ -0.9
TGFBR1-208ENST00000550253 P4HBP07237 508 aaKnown RBP9.45□□□□□ -0.9
TGFBR1-208ENST00000550253 SH3BP2P78314 561 aa9.45□□□□□ -0.9
TGFBR1-208ENST00000550253 TSNAXIP1Q2TAA8 658 aa9.45□□□□□ -0.9
TGFBR1-208ENST00000550253 TMC7Q7Z402 723 aa9.45□□□□□ -0.9
TGFBR1-208ENST00000550253 SREK1Q8WXA9 508 aaKnown RBP9.45□□□□□ -0.9
TGFBR1-208ENST00000550253 KCTD15Q96SI1 283 aaPredicted RBP9.45□□□□□ -0.9
TGFBR1-208ENST00000550253 MRPL58Q14197 206 aaKnown RBP9.44□□□□□ -0.9
TGFBR1-208ENST00000550253 NYAP1Q6ZVC0 841 aa9.44□□□□□ -0.9
TGFBR1-208ENST00000550253 ZNF516Q92618 1163 aa9.44□□□□□ -0.9
TGFBR1-208ENST00000550253 BACH2Q9BYV9 841 aa9.44□□□□□ -0.9
TGFBR1-208ENST00000550253 MAGI1Q96QZ7 1491 aaPredicted RBP9.44□□□□□ -0.9
TGFBR1-208ENST00000550253 SCNN1DP51172 638 aa9.43□□□□□ -0.9
TGFBR1-208ENST00000550253 TJAP1Q5JTD0 557 aa9.43□□□□□ -0.9
TGFBR1-208ENST00000550253 SCG3Q8WXD2 468 aaKnown RBP9.43□□□□□ -0.9
TGFBR1-208ENST00000550253 FCF1Q9Y324 198 aaKnown RBP9.43□□□□□ -0.9
TGFBR1-208ENST00000550253 ERCC6L2Q5T890 1561 aa9.43□□□□□ -0.9
TGFBR1-208ENST00000550253 SYNJ2O15056 1496 aa9.42□□□□□ -0.9
TGFBR1-208ENST00000550253 ERVH48-1M5A8F1 160 aa9.42□□□□□ -0.9
TGFBR1-208ENST00000550253 WASLO00401 505 aaPredicted RBP9.42□□□□□ -0.9
TGFBR1-208ENST00000550253 RAB15P59190 212 aa9.42□□□□□ -0.9
TGFBR1-208ENST00000550253 BCL11AQ9H165 835 aa9.42□□□□□ -0.9
TGFBR1-208ENST00000550253 ATAD2Q6PL18 1390 aa9.42□□□□□ -0.9
TGFBR1-208ENST00000550253 GRIN2BQ13224 1484 aa9.42□□□□□ -0.9
TGFBR1-208ENST00000550253 TREHO43280 583 aa9.41□□□□□ -0.9
TGFBR1-208ENST00000550253 MPSTP25325 297 aa9.41□□□□□ -0.9
TGFBR1-208ENST00000550253 EPHA4P54764 986 aa9.41□□□□□ -0.9
TGFBR1-208ENST00000550253 ERVK-9P63128 1117 aa9.41□□□□□ -0.9
TGFBR1-208ENST00000550253 FMR1Q06787 632 aaKnown RBP eCLIP9.41□□□□□ -0.9
TGFBR1-208ENST00000550253 INTS6LQ5JSJ4 861 aaKnown RBP9.41□□□□□ -0.9
TGFBR1-208ENST00000550253 LDLRAD1Q5T700 205 aa9.41□□□□□ -0.9
TGFBR1-208ENST00000550253 TNS4Q8IZW8 715 aa9.41□□□□□ -0.9
TGFBR1-208ENST00000550253 ABCA5Q8WWZ7 1642 aa9.41□□□□□ -0.9
TGFBR1-208ENST00000550253 NAALADL2Q58DX5 795 aa9.41□□□□□ -0.9
TGFBR1-208ENST00000550253 SAP130Q9H0E3 1048 aa9.41□□□□□ -0.9
TGFBR1-208ENST00000550253 OSBPL3Q9H4L5 887 aa9.41□□□□□ -0.9
TGFBR1-208ENST00000550253 IL21Q9HBE4 155 aa9.41□□□□□ -0.9
TGFBR1-208ENST00000550253 BACH1O14867 736 aa9.4□□□□□ -0.91
TGFBR1-208ENST00000550253 STAU1O95793 577 aaKnown RBP9.4□□□□□ -0.91
TGFBR1-208ENST00000550253 S1PR4O95977 384 aa9.4□□□□□ -0.91
TGFBR1-208ENST00000550253 GDF10P55107 478 aa9.4□□□□□ -0.91
TGFBR1-208ENST00000550253 CHMP7Q8WUX9 453 aaPredicted RBP9.4□□□□□ -0.91
TGFBR1-208ENST00000550253 PUS7Q96PZ0 661 aaKnown RBP9.4□□□□□ -0.91
TGFBR1-208ENST00000550253 MAP4K5Q9Y4K4 846 aa9.4□□□□□ -0.91
TGFBR1-208ENST00000550253 GAPVD1Q14C86 1478 aa9.4□□□□□ -0.91
TGFBR1-208ENST00000550253 NDUFB5O43674 189 aa9.39□□□□□ -0.91
TGFBR1-208ENST00000550253 DSC3Q14574 896 aa9.39□□□□□ -0.91
TGFBR1-208ENST00000550253 CC2D2BQ6DHV5 1058 aa9.39□□□□□ -0.91
TGFBR1-208ENST00000550253 CITED4Q96RK1 184 aa9.39□□□□□ -0.91
TGFBR1-208ENST00000550253 TSPAN10Q9H1Z9 355 aaPredicted RBP9.39□□□□□ -0.91
TGFBR1-208ENST00000550253 IGHA2P01877 340 aa9.38□□□□□ -0.91
TGFBR1-208ENST00000550253 C16orf46Q6P387 395 aa9.38□□□□□ -0.91
TGFBR1-208ENST00000550253 FAM177A1Q8N128 213 aaPredicted RBP9.38□□□□□ -0.91
TGFBR1-208ENST00000550253 BRPF3Q9ULD4 1205 aa9.38□□□□□ -0.91
TGFBR1-208ENST00000550253 A0A1W2PRU2 124 aa9.37□□□□□ -0.91
TGFBR1-208ENST00000550253 SCAMP3O14828 347 aaKnown RBP9.37□□□□□ -0.91
TGFBR1-208ENST00000550253 INHAP05111 366 aa9.37□□□□□ -0.91
TGFBR1-208ENST00000550253 HDLBPQ00341 1268 aaKnown RBP9.37□□□□□ -0.91
TGFBR1-208ENST00000550253 NKX2-3Q8TAU0 364 aa9.37□□□□□ -0.91
TGFBR1-208ENST00000550253 SLC4A9Q96Q91 983 aa9.37□□□□□ -0.91
TGFBR1-208ENST00000550253 FZD6O60353 706 aa9.36□□□□□ -0.91
TGFBR1-208ENST00000550253 ERCC5P28715 1186 aaPredicted RBP9.36□□□□□ -0.91
TGFBR1-208ENST00000550253 VASH1Q7L8A9 365 aaPredicted RBP9.36□□□□□ -0.91
TGFBR1-208ENST00000550253 ABCA10Q8WWZ4 1543 aa9.36□□□□□ -0.91
TGFBR1-208ENST00000550253 HMGB1P09429 215 aaKnown RBP9.36□□□□□ -0.91
TGFBR1-208ENST00000550253 VARSP26640 1264 aaKnown RBP9.36□□□□□ -0.91
TGFBR1-208ENST00000550253 EIF1AXP47813 144 aaKnown RBP9.36□□□□□ -0.91
TGFBR1-208ENST00000550253 FOXK2Q01167 660 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms