RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 ZNF784Q8NCA9 323 aaPredicted RBP19.51■□□□□ 0.71
TROAP-203ENST00000546735 DCAF5Q96JK2 942 aa19.51■□□□□ 0.71
TROAP-203ENST00000546735 PLEKHG2Q9H7P9 1386 aa19.51■□□□□ 0.71
TROAP-203ENST00000546735 KDM6AO15550 1401 aaPredicted RBP19.51■□□□□ 0.71
TROAP-203ENST00000546735 ERVV-2B6SEH9 535 aa19.5■□□□□ 0.71
TROAP-203ENST00000546735 GNPATO15228 680 aa19.5■□□□□ 0.71
TROAP-203ENST00000546735 HSP90AB1P08238 724 aaKnown RBP19.5■□□□□ 0.71
TROAP-203ENST00000546735 AMOTQ4VCS5 1084 aa19.5■□□□□ 0.71
TROAP-203ENST00000546735 SLC4A9Q96Q91 983 aa19.5■□□□□ 0.71
TROAP-203ENST00000546735 RBM42Q9BTD8 480 aaKnown RBP19.5■□□□□ 0.71
TROAP-203ENST00000546735 SSFA2P28290 1259 aa19.49■□□□□ 0.71
TROAP-203ENST00000546735 CABP4P57796 275 aa19.49■□□□□ 0.71
TROAP-203ENST00000546735 CNGB1Q14028 1251 aaPredicted RBP19.49■□□□□ 0.71
TROAP-203ENST00000546735 CC2D1BQ5T0F9 858 aaKnown RBP19.49■□□□□ 0.71
TROAP-203ENST00000546735 KDRP35968 1356 aa19.48■□□□□ 0.71
TROAP-203ENST00000546735 UBR3Q6ZT12 1888 aa19.48■□□□□ 0.71
TROAP-203ENST00000546735 PER1O15534 1290 aaPredicted RBP19.48■□□□□ 0.71
TROAP-203ENST00000546735 YBX3P16989 372 aaKnown RBP eCLIP19.48■□□□□ 0.717e-8■□□□□ 11.2
TROAP-203ENST00000546735 MTHFSP49914 203 aa19.48■□□□□ 0.71
TROAP-203ENST00000546735 C1orf141Q5JVX7 400 aa19.47■□□□□ 0.71
TROAP-203ENST00000546735 CD2APQ9Y5K6 639 aa19.46■□□□□ 0.71
TROAP-203ENST00000546735 HMOX1P09601 288 aa19.45■□□□□ 0.7
TROAP-203ENST00000546735 NFATC2IPQ8NCF5 419 aa19.44■□□□□ 0.7
TROAP-203ENST00000546735 PTCD1O75127 700 aaKnown RBP19.43■□□□□ 0.7
TROAP-203ENST00000546735 WWC3Q9ULE0 1092 aa19.43■□□□□ 0.7
TROAP-203ENST00000546735 RTCBQ9Y3I0 505 aaKnown RBP19.42■□□□□ 0.7
TROAP-203ENST00000546735 CHD4Q14839 1912 aa19.42■□□□□ 0.7
TROAP-203ENST00000546735 TRAPPC3LQ5T215 181 aa19.41■□□□□ 0.7
TROAP-203ENST00000546735 GRIN3BO60391 1043 aa19.4■□□□□ 0.7
TROAP-203ENST00000546735 AKAP4Q5JQC9 854 aa19.4■□□□□ 0.7
TROAP-203ENST00000546735 ARHGEF1Q92888 912 aaKnown RBP19.4■□□□□ 0.7
TROAP-203ENST00000546735 LGR6Q9HBX8 967 aa19.4■□□□□ 0.7
TROAP-203ENST00000546735 DIAPH1O60610 1272 aaKnown RBP19.39■□□□□ 0.69
TROAP-203ENST00000546735 MMP10P09238 476 aa19.39■□□□□ 0.69
TROAP-203ENST00000546735 RC3H1Q5TC82 1133 aaKnown RBP19.39■□□□□ 0.69
TROAP-203ENST00000546735 CNTNAP4Q9C0A0 1308 aa19.39■□□□□ 0.69
TROAP-203ENST00000546735 RPS6KA4O75676 772 aa19.38■□□□□ 0.69
TROAP-203ENST00000546735 GOLGB1Q14789 3259 aaKnown RBP19.38■□□□□ 0.69
TROAP-203ENST00000546735 MTHFSDQ2M296 383 aaKnown RBP19.37■□□□□ 0.69
TROAP-203ENST00000546735 COL5A3P25940 1745 aaPredicted RBP19.37■□□□□ 0.69
TROAP-203ENST00000546735 SLC52A2Q9HAB3 445 aa19.36■□□□□ 0.69
TROAP-203ENST00000546735 ZNF831Q5JPB2 1677 aa19.36■□□□□ 0.69
TROAP-203ENST00000546735 RNMTO43148 476 aaKnown RBP19.35■□□□□ 0.69
TROAP-203ENST00000546735 GYS1P13807 737 aa19.35■□□□□ 0.69
TROAP-203ENST00000546735 RFC4P35249 363 aa19.35■□□□□ 0.69
TROAP-203ENST00000546735 CRKLP46109 303 aaKnown RBP19.35■□□□□ 0.69
TROAP-203ENST00000546735 U2SURPO15042 1029 aaKnown RBP19.34■□□□□ 0.69
TROAP-203ENST00000546735 ADRA2BP18089 450 aa19.34■□□□□ 0.69
TROAP-203ENST00000546735 SLC39A6Q13433 755 aa19.34■□□□□ 0.69
TROAP-203ENST00000546735 NLGN1Q8N2Q7 840 aa19.34■□□□□ 0.69
TROAP-203ENST00000546735 SCN11AQ9UI33 1791 aa19.34■□□□□ 0.69
TROAP-203ENST00000546735 NPC1L1Q9UHC9 1359 aa19.33■□□□□ 0.69
TROAP-203ENST00000546735 DNAJC10Q8IXB1 793 aa19.33■□□□□ 0.68
TROAP-203ENST00000546735 SRP68Q9UHB9 627 aaKnown RBP19.33■□□□□ 0.68
TROAP-203ENST00000546735 COL3A1P02461 1466 aaPredicted RBP19.33■□□□□ 0.68
TROAP-203ENST00000546735 CICQ96RK0 1608 aaPredicted RBP19.33■□□□□ 0.68
TROAP-203ENST00000546735 TJP1Q07157 1748 aa19.32■□□□□ 0.68
TROAP-203ENST00000546735 MYH14Q7Z406 1995 aaKnown RBP19.32■□□□□ 0.68
TROAP-203ENST00000546735 INTS5Q6P9B9 1019 aaKnown RBP19.31■□□□□ 0.68
TROAP-203ENST00000546735 C1QTNF8P60827 252 aa19.3■□□□□ 0.68
TROAP-203ENST00000546735 MRC1P22897 1456 aa19.29■□□□□ 0.68
TROAP-203ENST00000546735 PARP3Q9Y6F1 533 aa19.29■□□□□ 0.68
TROAP-203ENST00000546735 PXDNLA1KZ92 1463 aa19.28■□□□□ 0.68
TROAP-203ENST00000546735 C4AP0C0L4 1744 aa19.28■□□□□ 0.68
TROAP-203ENST00000546735 ATP10DQ9P241 1426 aa19.28■□□□□ 0.68
TROAP-203ENST00000546735 A0A0G2JLW4 131 aa19.28■□□□□ 0.68
TROAP-203ENST00000546735 GIGYF1O75420 1035 aaPredicted RBP19.28■□□□□ 0.68
TROAP-203ENST00000546735 FKBP8Q14318 412 aa19.28■□□□□ 0.68
TROAP-203ENST00000546735 CCDC87Q9NVE4 849 aa19.28■□□□□ 0.68
TROAP-203ENST00000546735 USP42Q9H9J4 1324 aaKnown RBP19.27■□□□□ 0.68
TROAP-203ENST00000546735 C10orf71Q711Q0 1435 aa19.27■□□□□ 0.68
TROAP-203ENST00000546735 KCPQ6ZWJ8 1503 aa19.26■□□□□ 0.67
TROAP-203ENST00000546735 CYP19A1P11511 503 aaPredicted RBP19.26■□□□□ 0.67
TROAP-203ENST00000546735 TGFB2P61812 414 aa19.26■□□□□ 0.67
TROAP-203ENST00000546735 ADAMTS7Q9UKP4 1686 aa19.25■□□□□ 0.67
TROAP-203ENST00000546735 DPEP1P16444 411 aa19.25■□□□□ 0.67
TROAP-203ENST00000546735 DDR1Q08345 913 aa19.25■□□□□ 0.67
TROAP-203ENST00000546735 IL17REQ8NFR9 667 aa19.25■□□□□ 0.67
TROAP-203ENST00000546735 BCS1LQ9Y276 419 aa19.25■□□□□ 0.67
TROAP-203ENST00000546735 ZBTB1Q9Y2K1 713 aa19.25■□□□□ 0.67
TROAP-203ENST00000546735 KIAA1551Q9HCM1 1747 aa19.25■□□□□ 0.67
TROAP-203ENST00000546735 SENP3-EIF4A1A0A087X0R7 540 aa19.24■□□□□ 0.67
TROAP-203ENST00000546735 USPL1Q5W0Q7 1092 aa19.24■□□□□ 0.67
TROAP-203ENST00000546735 ZNF526Q8TF50 670 aaPredicted RBP19.24■□□□□ 0.67
TROAP-203ENST00000546735 N4BP2Q86UW6 1770 aaPredicted RBP19.24■□□□□ 0.67
TROAP-203ENST00000546735 SOS1Q07889 1333 aaPredicted RBP19.24■□□□□ 0.67
TROAP-203ENST00000546735 GNAT3A8MTJ3 354 aa19.23■□□□□ 0.67
TROAP-203ENST00000546735 GAS2L2Q8NHY3 880 aa19.23■□□□□ 0.67
TROAP-203ENST00000546735 PHACTR3Q96KR7 559 aa19.23■□□□□ 0.67
TROAP-203ENST00000546735 KIF13BQ9NQT8 1826 aa19.23■□□□□ 0.67
TROAP-203ENST00000546735 ADCY9O60503 1353 aa19.22■□□□□ 0.67
TROAP-203ENST00000546735 PPP2R1AP30153 589 aa19.22■□□□□ 0.67
TROAP-203ENST00000546735 PRKAR2BP31323 418 aa19.22■□□□□ 0.67
TROAP-203ENST00000546735 TEFQ10587 303 aa19.22■□□□□ 0.67
TROAP-203ENST00000546735 TTC5Q8N0Z6 440 aa19.22■□□□□ 0.67
TROAP-203ENST00000546735 CFAP53Q96M91 514 aa19.22■□□□□ 0.67
TROAP-203ENST00000546735 VIRMAQ69YN4 1812 aaKnown RBP19.22■□□□□ 0.67
TROAP-203ENST00000546735 ZPR1O75312 459 aa19.21■□□□□ 0.67
TROAP-203ENST00000546735 CANXP27824 592 aaKnown RBP19.21■□□□□ 0.67
TROAP-203ENST00000546735 POLRMTO00411 1230 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms