RNA–Protein interactions for RNA: ENST00000545668.5

DDX11-229, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-229ENST00000545668 DDX49Q9Y6V7 483 aaKnown RBP11.98□□□□□ -0.49
DDX11-229ENST00000545668 DDX11L8A8MPP1 907 aa11.98□□□□□ -0.49
DDX11-229ENST00000545668 NBPF6Q5VWK0 638 aa11.98□□□□□ -0.49
DDX11-229ENST00000545668 SIRT2Q8IXJ6 389 aa11.98□□□□□ -0.49
DDX11-229ENST00000545668 NBPF4Q96M43 638 aa11.98□□□□□ -0.49
DDX11-229ENST00000545668 IL17REQ8NFR9 667 aa11.97□□□□□ -0.49
DDX11-229ENST00000545668 RBM42Q9BTD8 480 aaKnown RBP11.97□□□□□ -0.49
DDX11-229ENST00000545668 RTL1A6NKG5 1358 aa11.97□□□□□ -0.49
DDX11-229ENST00000545668 MAP3K5Q99683 1374 aa11.97□□□□□ -0.49
DDX11-229ENST00000545668 GCP02774 474 aa11.97□□□□□ -0.49
DDX11-229ENST00000545668 TAF7Q15545 349 aaPredicted RBP11.97□□□□□ -0.49
DDX11-229ENST00000545668 PLCD3Q8N3E9 789 aa11.96□□□□□ -0.49
DDX11-229ENST00000545668 F6X3S4 739 aa11.96□□□□□ -0.49
DDX11-229ENST00000545668 G2E3Q7L622 706 aa11.96□□□□□ -0.49
DDX11-229ENST00000545668 LRRC59Q96AG4 307 aaKnown RBP11.96□□□□□ -0.49
DDX11-229ENST00000545668 CCDC30Q5VVM6 783 aa11.96□□□□□ -0.5
DDX11-229ENST00000545668 KRT28Q7Z3Y7 464 aa11.96□□□□□ -0.5
DDX11-229ENST00000545668 C19orf44Q9H6X5 657 aa11.96□□□□□ -0.5
DDX11-229ENST00000545668 MSNP26038 577 aaKnown RBP11.95□□□□□ -0.5
DDX11-229ENST00000545668 BBXQ8WY36 941 aaPredicted RBP11.95□□□□□ -0.5
DDX11-229ENST00000545668 FKBP5Q13451 457 aaPredicted RBP11.95□□□□□ -0.5
DDX11-229ENST00000545668 ATF3P18847 181 aa11.95□□□□□ -0.5
DDX11-229ENST00000545668 GRPEL1Q9HAV7 217 aa11.95□□□□□ -0.5
DDX11-229ENST00000545668 MRE11P49959 708 aa11.94□□□□□ -0.5
DDX11-229ENST00000545668 MEIS3Q99687 375 aa11.94□□□□□ -0.5
DDX11-229ENST00000545668 RPAP2Q8IXW5 612 aaPredicted RBP11.94□□□□□ -0.5
DDX11-229ENST00000545668 MSH6P52701 1360 aa11.94□□□□□ -0.5
DDX11-229ENST00000545668 TNPO1Q92973 898 aaKnown RBP11.94□□□□□ -0.5
DDX11-229ENST00000545668 CCT4P50991 539 aaKnown RBP11.93□□□□□ -0.5
DDX11-229ENST00000545668 R3HCC1Q9Y3T6 440 aaKnown RBP11.93□□□□□ -0.5
DDX11-229ENST00000545668 MCTP1Q6DN14 999 aa11.93□□□□□ -0.5
DDX11-229ENST00000545668 ZNF530Q6P9A1 599 aaPredicted RBP11.93□□□□□ -0.5
DDX11-229ENST00000545668 TEFQ10587 303 aa11.93□□□□□ -0.5
DDX11-229ENST00000545668 FLIIQ13045 1269 aa11.93□□□□□ -0.5
DDX11-229ENST00000545668 PLEKHO1Q53GL0 409 aaPredicted RBP11.93□□□□□ -0.5
DDX11-229ENST00000545668 ARHGEF25Q86VW2 580 aa11.93□□□□□ -0.5
DDX11-229ENST00000545668 ANKRD44Q8N8A2 993 aa11.93□□□□□ -0.5
DDX11-229ENST00000545668 RGS12O14924 1447 aa11.92□□□□□ -0.5
DDX11-229ENST00000545668 BMP2KLQ5H9B9 411 aa11.92□□□□□ -0.5
DDX11-229ENST00000545668 DNAJC5Q9H3Z4 198 aa11.92□□□□□ -0.5
DDX11-229ENST00000545668 DCTPP1Q9H773 170 aa11.92□□□□□ -0.5
DDX11-229ENST00000545668 CEP85Q6P2H3 762 aa11.92□□□□□ -0.5
DDX11-229ENST00000545668 CASC1Q6TDU7 716 aa11.92□□□□□ -0.5
DDX11-229ENST00000545668 ANKRD24Q8TF21 1146 aa11.92□□□□□ -0.5
DDX11-229ENST00000545668 ANTXR1Q9H6X2 564 aa11.92□□□□□ -0.5
DDX11-229ENST00000545668 LGR6Q9HBX8 967 aa11.92□□□□□ -0.5
DDX11-229ENST00000545668 VIRMAQ69YN4 1812 aaKnown RBP11.92□□□□□ -0.5
DDX11-229ENST00000545668 EIF2S2P20042 333 aaKnown RBP11.92□□□□□ -0.5
DDX11-229ENST00000545668 ZC3H6P61129 1189 aaKnown RBP11.92□□□□□ -0.5
DDX11-229ENST00000545668 C1orf141Q5JVX7 400 aa11.92□□□□□ -0.5
DDX11-229ENST00000545668 HDGFL1Q5TGJ6 251 aa11.92□□□□□ -0.5
DDX11-229ENST00000545668 BABAM1Q9NWV8 329 aa11.92□□□□□ -0.5
DDX11-229ENST00000545668 NWD1Q149M9 1564 aa11.92□□□□□ -0.5
DDX11-229ENST00000545668 HMMRO75330 724 aa11.91□□□□□ -0.5
DDX11-229ENST00000545668 PTMAP06454 111 aaKnown RBP11.91□□□□□ -0.5
DDX11-229ENST00000545668 PLCB2Q00722 1185 aa11.91□□□□□ -0.5
DDX11-229ENST00000545668 MPRIPQ6WCQ1 1025 aa11.91□□□□□ -0.5
DDX11-229ENST00000545668 KIAA1211Q6ZU35 1233 aa11.91□□□□□ -0.5
DDX11-229ENST00000545668 MARF1Q9Y4F3 1742 aaKnown RBP11.91□□□□□ -0.5
DDX11-229ENST00000545668 SSFA2P28290 1259 aa11.91□□□□□ -0.5
DDX11-229ENST00000545668 NFAT5O94916 1531 aa11.9□□□□□ -0.5
DDX11-229ENST00000545668 AMOTQ4VCS5 1084 aa11.9□□□□□ -0.5
DDX11-229ENST00000545668 MPNDQ8N594 471 aa11.9□□□□□ -0.5
DDX11-229ENST00000545668 AKAP4Q5JQC9 854 aa11.9□□□□□ -0.51
DDX11-229ENST00000545668 LTN1O94822 1766 aa11.9□□□□□ -0.51
DDX11-229ENST00000545668 CAVIN1Q6NZI2 390 aaKnown RBP11.89□□□□□ -0.51
DDX11-229ENST00000545668 DDX17Q92841 729 aaKnown RBP11.89□□□□□ -0.51
DDX11-229ENST00000545668 C1orf167Q5SNV9 1468 aa11.89□□□□□ -0.51
DDX11-229ENST00000545668 BTBD11A6QL63 1104 aa11.89□□□□□ -0.51
DDX11-229ENST00000545668 VGLL3A8MV65 326 aa11.89□□□□□ -0.51
DDX11-229ENST00000545668 ESPNB1AK53 854 aa11.89□□□□□ -0.51
DDX11-229ENST00000545668 GNAI2P04899 355 aa11.89□□□□□ -0.51
DDX11-229ENST00000545668 TBC1D9Q6ZT07 1266 aa11.89□□□□□ -0.51
DDX11-229ENST00000545668 AXIN2Q9Y2T1 843 aa11.89□□□□□ -0.51
DDX11-229ENST00000545668 SOS1Q07889 1333 aaPredicted RBP11.89□□□□□ -0.51
DDX11-229ENST00000545668 TMEM94Q12767 1356 aa11.89□□□□□ -0.51
DDX11-229ENST00000545668 SMARCA5O60264 1052 aaPredicted RBP11.89□□□□□ -0.51
DDX11-229ENST00000545668 USP54Q70EL1 1684 aa11.89□□□□□ -0.51
DDX11-229ENST00000545668 HSPA2P54652 639 aa11.88□□□□□ -0.51
DDX11-229ENST00000545668 C16orf71Q8IYS4 520 aaPredicted RBP11.88□□□□□ -0.51
DDX11-229ENST00000545668 K7ELQ4 463 aaPredicted RBP11.88□□□□□ -0.51
DDX11-229ENST00000545668 TRIM6-TRIM34B2RNG4 842 aa11.88□□□□□ -0.51
DDX11-229ENST00000545668 GNAI3P08754 354 aa11.88□□□□□ -0.51
DDX11-229ENST00000545668 NASPP49321 788 aaPredicted RBP11.88□□□□□ -0.51
DDX11-229ENST00000545668 ATP10DQ9P241 1426 aa11.87□□□□□ -0.51
DDX11-229ENST00000545668 PLEKHM2Q8IWE5 1019 aa11.87□□□□□ -0.51
DDX11-229ENST00000545668 NLRP2Q9NX02 1062 aa11.87□□□□□ -0.51
DDX11-229ENST00000545668 CEMIPQ8WUJ3 1361 aa11.87□□□□□ -0.51
DDX11-229ENST00000545668 CDC45O75419 566 aa11.87□□□□□ -0.51
DDX11-229ENST00000545668 CHMP4AQ9BY43 222 aa11.87□□□□□ -0.51
DDX11-229ENST00000545668 PHAXQ9H814 394 aaKnown RBP11.87□□□□□ -0.51
DDX11-229ENST00000545668 EIF4A1P60842 406 aaKnown RBP11.87□□□□□ -0.51
DDX11-229ENST00000545668 RNF214Q8ND24 703 aa11.87□□□□□ -0.51
DDX11-229ENST00000545668 KCNQ3O43525 872 aa11.86□□□□□ -0.51
DDX11-229ENST00000545668 PRPF40AO75400 957 aaKnown RBP11.86□□□□□ -0.51
DDX11-229ENST00000545668 CSB-PGBD3P0DP91 1061 aa11.86□□□□□ -0.51
DDX11-229ENST00000545668 RILPL2Q969X0 211 aa11.86□□□□□ -0.51
DDX11-229ENST00000545668 CADPS2Q86UW7 1296 aa11.86□□□□□ -0.51
DDX11-229ENST00000545668 IGSF3O75054 1194 aa11.86□□□□□ -0.51
DDX11-229ENST00000545668 SKOR2Q2VWA4 1001 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms