RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 SLC39A6Q13433 755 aa20.64■□□□□ 0.89
XRCC1-202ENST00000543982 BTBD11A6QL63 1104 aa20.63■□□□□ 0.89
XRCC1-202ENST00000543982 TCERG1O14776 1098 aaKnown RBP20.63■□□□□ 0.89
XRCC1-202ENST00000543982 CDCA7Q9BWT1 371 aaPredicted RBP20.63■□□□□ 0.89
XRCC1-202ENST00000543982 GLI3P10071 1580 aa20.63■□□□□ 0.89
XRCC1-202ENST00000543982 TNS2Q63HR2 1409 aa20.63■□□□□ 0.89
XRCC1-202ENST00000543982 HSP90AB1P08238 724 aaKnown RBP20.63■□□□□ 0.89
XRCC1-202ENST00000543982 FKBP8Q14318 412 aa20.63■□□□□ 0.89
XRCC1-202ENST00000543982 TRPC5Q9UL62 973 aaPredicted RBP20.63■□□□□ 0.89
XRCC1-202ENST00000543982 TWISTNBQ3B726 338 aaPredicted RBP20.61■□□□□ 0.89
XRCC1-202ENST00000543982 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.61■□□□□ 0.89
XRCC1-202ENST00000543982 WNK3Q9BYP7 1800 aa20.61■□□□□ 0.89
XRCC1-202ENST00000543982 CABP4P57796 275 aa20.61■□□□□ 0.89
XRCC1-202ENST00000543982 EIF4A1P60842 406 aaKnown RBP20.61■□□□□ 0.89
XRCC1-202ENST00000543982 SSH1Q8WYL5 1049 aa20.61■□□□□ 0.89
XRCC1-202ENST00000543982 BABAM1Q9NWV8 329 aa20.6■□□□□ 0.89
XRCC1-202ENST00000543982 RRP1P56182 461 aaKnown RBP20.59■□□□□ 0.89
XRCC1-202ENST00000543982 RGS17Q9UGC6 210 aaPredicted RBP20.59■□□□□ 0.89
XRCC1-202ENST00000543982 SCN11AQ9UI33 1791 aa20.59■□□□□ 0.89
XRCC1-202ENST00000543982 ERVV-2B6SEH9 535 aa20.59■□□□□ 0.89
XRCC1-202ENST00000543982 ONECUT3O60422 494 aaPredicted RBP20.59■□□□□ 0.89
XRCC1-202ENST00000543982 MRC1P22897 1456 aa20.59■□□□□ 0.89
XRCC1-202ENST00000543982 PRAMEF22A3QJZ6 481 aa20.58■□□□□ 0.89
XRCC1-202ENST00000543982 FAM182BQ5T319 152 aa20.58■□□□□ 0.89
XRCC1-202ENST00000543982 A0A0G2JS52 829 aa20.57■□□□□ 0.88
XRCC1-202ENST00000543982 MYT1Q01538 1121 aa20.57■□□□□ 0.88
XRCC1-202ENST00000543982 C20orf194Q5TEA3 1177 aa20.57■□□□□ 0.88
XRCC1-202ENST00000543982 TNNQ9UQP3 1299 aa20.57■□□□□ 0.88
XRCC1-202ENST00000543982 PIGBQ92521 554 aa20.57■□□□□ 0.88
XRCC1-202ENST00000543982 CT47B1P0C2W7 299 aaPredicted RBP20.56■□□□□ 0.88
XRCC1-202ENST00000543982 ZNF790Q6PG37 636 aa20.56■□□□□ 0.88
XRCC1-202ENST00000543982 TOGARAM1Q9Y4F4 1720 aa20.56■□□□□ 0.88
XRCC1-202ENST00000543982 SIPA1L3O60292 1781 aaPredicted RBP20.56■□□□□ 0.88
XRCC1-202ENST00000543982 PRIM1P49642 420 aaKnown RBP20.55■□□□□ 0.88
XRCC1-202ENST00000543982 SEPT12Q8IYM1 358 aa20.55■□□□□ 0.88
XRCC1-202ENST00000543982 ACSBG1Q96GR2 724 aa20.55■□□□□ 0.88
XRCC1-202ENST00000543982 VIRMAQ69YN4 1812 aaKnown RBP20.55■□□□□ 0.88
XRCC1-202ENST00000543982 NECTIN2Q92692 538 aa20.55■□□□□ 0.88
XRCC1-202ENST00000543982 ZNF496Q96IT1 587 aaPredicted RBP20.54■□□□□ 0.88
XRCC1-202ENST00000543982 HEG1Q9ULI3 1381 aa20.54■□□□□ 0.88
XRCC1-202ENST00000543982 THSD7AQ9UPZ6 1657 aa20.54■□□□□ 0.88
XRCC1-202ENST00000543982 PTF1AQ7RTS3 328 aa20.54■□□□□ 0.88
XRCC1-202ENST00000543982 SMC4Q9NTJ3 1288 aa20.54■□□□□ 0.88
XRCC1-202ENST00000543982 KCNQ2O43526 872 aa20.53■□□□□ 0.88
XRCC1-202ENST00000543982 MRPL50Q8N5N7 158 aaKnown RBP20.53■□□□□ 0.88
XRCC1-202ENST00000543982 ASAP1Q9ULH1 1129 aa20.53■□□□□ 0.88
XRCC1-202ENST00000543982 KDM3BQ7LBC6 1761 aa20.52■□□□□ 0.88
XRCC1-202ENST00000543982 GIGYF1O75420 1035 aaPredicted RBP20.52■□□□□ 0.87
XRCC1-202ENST00000543982 FRAT1Q92837 279 aaPredicted RBP20.52■□□□□ 0.87
XRCC1-202ENST00000543982 TMOD3Q9NYL9 352 aa20.52■□□□□ 0.87
XRCC1-202ENST00000543982 ZNF772Q68DY9 489 aaPredicted RBP20.51■□□□□ 0.87
XRCC1-202ENST00000543982 SYTL4Q96C24 671 aaPredicted RBP20.51■□□□□ 0.87
XRCC1-202ENST00000543982 ALDH1L2Q3SY69 923 aa20.5■□□□□ 0.87
XRCC1-202ENST00000543982 ERICH6BQ5W0A0 696 aa20.5■□□□□ 0.87
XRCC1-202ENST00000543982 POTEAQ6S8J7 498 aa20.5■□□□□ 0.87
XRCC1-202ENST00000543982 ATG3Q9NT62 314 aa20.5■□□□□ 0.87
XRCC1-202ENST00000543982 NOB1Q9ULX3 412 aaKnown RBP20.5■□□□□ 0.87
XRCC1-202ENST00000543982 BCL9O00512 1426 aa20.49■□□□□ 0.87
XRCC1-202ENST00000543982 EIF2S2P20042 333 aaKnown RBP20.49■□□□□ 0.87
XRCC1-202ENST00000543982 PTCD1O75127 700 aaKnown RBP20.48■□□□□ 0.87
XRCC1-202ENST00000543982 RLBP1P12271 317 aa20.48■□□□□ 0.87
XRCC1-202ENST00000543982 G2E3Q7L622 706 aa20.48■□□□□ 0.87
XRCC1-202ENST00000543982 RBM6P78332 1123 aaKnown RBP20.47■□□□□ 0.87
XRCC1-202ENST00000543982 ZNF428Q96B54 188 aa20.47■□□□□ 0.87
XRCC1-202ENST00000543982 USP16Q9Y5T5 823 aa20.47■□□□□ 0.87
XRCC1-202ENST00000543982 TTC5Q8N0Z6 440 aa20.46■□□□□ 0.87
XRCC1-202ENST00000543982 PANK1Q8TE04 598 aa20.46■□□□□ 0.87
XRCC1-202ENST00000543982 SLC4A2P04920 1241 aa20.46■□□□□ 0.87
XRCC1-202ENST00000543982 BRPF1P55201 1214 aaPredicted RBP20.46■□□□□ 0.87
XRCC1-202ENST00000543982 ILDR1Q86SU0 546 aaPredicted RBP20.46■□□□□ 0.87
XRCC1-202ENST00000543982 SLC4A9Q96Q91 983 aa20.46■□□□□ 0.87
XRCC1-202ENST00000543982 ANXA1P04083 346 aa20.45■□□□□ 0.86
XRCC1-202ENST00000543982 HDGFL1Q5TGJ6 251 aa20.45■□□□□ 0.86
XRCC1-202ENST00000543982 CLUAP1Q96AJ1 413 aa20.45■□□□□ 0.86
XRCC1-202ENST00000543982 KCPQ6ZWJ8 1503 aa20.45■□□□□ 0.86
XRCC1-202ENST00000543982 PROSER3Q2NL68 480 aa20.45■□□□□ 0.86
XRCC1-202ENST00000543982 FMNL2Q96PY5 1086 aa20.45■□□□□ 0.86
XRCC1-202ENST00000543982 TRIM27P14373 513 aa20.44■□□□□ 0.86
XRCC1-202ENST00000543982 EXOC6Q8TAG9 804 aa20.44■□□□□ 0.86
XRCC1-202ENST00000543982 CRBNQ96SW2 442 aa20.44■□□□□ 0.86
XRCC1-202ENST00000543982 CHPF2Q9P2E5 772 aa20.43■□□□□ 0.86
XRCC1-202ENST00000543982 DOT1LQ8TEK3 1739 aa20.43■□□□□ 0.86
XRCC1-202ENST00000543982 ITGB4P16144 1822 aa20.43■□□□□ 0.86
XRCC1-202ENST00000543982 HOXB7P09629 217 aa20.43■□□□□ 0.86
XRCC1-202ENST00000543982 PIP4K2AP48426 406 aaPredicted RBP20.43■□□□□ 0.86
XRCC1-202ENST00000543982 CCDC30Q5VVM6 783 aa20.43■□□□□ 0.86
XRCC1-202ENST00000543982 SNRPA1P09661 255 aaKnown RBP20.42■□□□□ 0.86
XRCC1-202ENST00000543982 RXRBP28702 533 aa20.42■□□□□ 0.86
XRCC1-202ENST00000543982 PDIA6Q15084 440 aa20.42■□□□□ 0.86
XRCC1-202ENST00000543982 PHAXQ9H814 394 aaKnown RBP20.42■□□□□ 0.86
XRCC1-202ENST00000543982 ZKSCAN2Q63HK3 967 aa20.41■□□□□ 0.86
XRCC1-202ENST00000543982 PAPPAQ13219 1627 aa20.41■□□□□ 0.86
XRCC1-202ENST00000543982 SOS1Q07889 1333 aaPredicted RBP20.41■□□□□ 0.86
XRCC1-202ENST00000543982 CANXP27824 592 aaKnown RBP20.41■□□□□ 0.86
XRCC1-202ENST00000543982 ATF7IPQ6VMQ6 1270 aa20.41■□□□□ 0.86
XRCC1-202ENST00000543982 KRT27Q7Z3Y8 459 aa20.4■□□□□ 0.86
XRCC1-202ENST00000543982 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.4■□□□□ 0.86
XRCC1-202ENST00000543982 RBM42Q9BTD8 480 aaKnown RBP20.4■□□□□ 0.86
XRCC1-202ENST00000543982 KAT6BQ8WYB5 2073 aa20.39■□□□□ 0.86
XRCC1-202ENST00000543982 COG6Q9Y2V7 657 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms