RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 BABAM1Q9NWV8 329 aa21.77■■□□□ 1.08
TMEM50B-210ENST00000542230 FAM208AQ9UK61 1670 aaKnown RBP21.77■■□□□ 1.08
TMEM50B-210ENST00000542230 ANXA1P04083 346 aa21.76■■□□□ 1.07
TMEM50B-210ENST00000542230 HDGFL1Q5TGJ6 251 aa21.76■■□□□ 1.07
TMEM50B-210ENST00000542230 CPDO75976 1380 aa21.76■■□□□ 1.07
TMEM50B-210ENST00000542230 SEC24BO95487 1268 aa21.76■■□□□ 1.07
TMEM50B-210ENST00000542230 FKBP5Q13451 457 aaPredicted RBP21.75■■□□□ 1.07
TMEM50B-210ENST00000542230 LNPKQ9C0E8 428 aa21.75■■□□□ 1.07
TMEM50B-210ENST00000542230 TATP17735 454 aaPredicted RBP21.74■■□□□ 1.07
TMEM50B-210ENST00000542230 ANP32AP39687 249 aaKnown RBP21.74■■□□□ 1.07
TMEM50B-210ENST00000542230 VIRMAQ69YN4 1812 aaKnown RBP21.74■■□□□ 1.07
TMEM50B-210ENST00000542230 SLC39A6Q13433 755 aa21.73■■□□□ 1.07
TMEM50B-210ENST00000542230 CYP27B1O15528 508 aa21.73■■□□□ 1.07
TMEM50B-210ENST00000542230 KDM6AO15550 1401 aaPredicted RBP21.72■■□□□ 1.07
TMEM50B-210ENST00000542230 PHKG2P15735 406 aa21.72■■□□□ 1.07
TMEM50B-210ENST00000542230 BCL11AQ9H165 835 aa21.72■■□□□ 1.07
TMEM50B-210ENST00000542230 CHPF2Q9P2E5 772 aa21.72■■□□□ 1.07
TMEM50B-210ENST00000542230 KDM3BQ7LBC6 1761 aa21.72■■□□□ 1.07
TMEM50B-210ENST00000542230 NUCB1Q02818 461 aa21.72■■□□□ 1.07
TMEM50B-210ENST00000542230 ANKRD45Q5TZF3 282 aa21.7■■□□□ 1.07
TMEM50B-210ENST00000542230 NFATC2IPQ8NCF5 419 aa21.7■■□□□ 1.07
TMEM50B-210ENST00000542230 ATP10DQ9P241 1426 aa21.7■■□□□ 1.06
TMEM50B-210ENST00000542230 IPO9Q96P70 1041 aaKnown RBP21.69■■□□□ 1.06
TMEM50B-210ENST00000542230 CHMP4BQ9H444 224 aaKnown RBP21.69■■□□□ 1.06
TMEM50B-210ENST00000542230 STRN4Q9NRL3 753 aa21.69■■□□□ 1.06
TMEM50B-210ENST00000542230 TOM1L2Q6ZVM7 507 aa21.69■■□□□ 1.06
TMEM50B-210ENST00000542230 CHD1LQ86WJ1 897 aa21.69■■□□□ 1.06
TMEM50B-210ENST00000542230 PROSER3Q2NL68 480 aa21.68■■□□□ 1.06
TMEM50B-210ENST00000542230 CEP85Q6P2H3 762 aa21.68■■□□□ 1.06
TMEM50B-210ENST00000542230 SPG7Q9UQ90 795 aa21.68■■□□□ 1.06
TMEM50B-210ENST00000542230 GIGYF1O75420 1035 aaPredicted RBP21.67■■□□□ 1.06
TMEM50B-210ENST00000542230 WDR17Q8IZU2 1322 aa21.67■■□□□ 1.06
TMEM50B-210ENST00000542230 LARP1Q6PKG0 1096 aaKnown RBP21.67■■□□□ 1.06
TMEM50B-210ENST00000542230 CCT4P50991 539 aaKnown RBP21.66■■□□□ 1.06
TMEM50B-210ENST00000542230 IFNL2Q8IZJ0 200 aa21.66■■□□□ 1.06
TMEM50B-210ENST00000542230 ANKRD44Q8N8A2 993 aa21.66■■□□□ 1.06
TMEM50B-210ENST00000542230 SLC52A2Q9HAB3 445 aa21.66■■□□□ 1.06
TMEM50B-210ENST00000542230 COL5A2P05997 1499 aaPredicted RBP21.65■■□□□ 1.06
TMEM50B-210ENST00000542230 SOS1Q07889 1333 aaPredicted RBP21.65■■□□□ 1.06
TMEM50B-210ENST00000542230 USP35Q9P2H5 1018 aa21.65■■□□□ 1.06
TMEM50B-210ENST00000542230 NHSL1Q5SYE7 1610 aa21.64■■□□□ 1.06
TMEM50B-210ENST00000542230 SIPA1L3O60292 1781 aaPredicted RBP21.64■■□□□ 1.05
TMEM50B-210ENST00000542230 GCC1Q96CN9 775 aa21.64■■□□□ 1.05
TMEM50B-210ENST00000542230 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.64■■□□□ 1.054e-6■□□□□ 10.8
TMEM50B-210ENST00000542230 HEG1Q9ULI3 1381 aa21.64■■□□□ 1.05
TMEM50B-210ENST00000542230 ABCA3Q99758 1704 aa21.64■■□□□ 1.05
TMEM50B-210ENST00000542230 APBB1O00213 710 aa21.63■■□□□ 1.05
TMEM50B-210ENST00000542230 OVOS2A0A0G2JMS6 1433 aa21.63■■□□□ 1.05
TMEM50B-210ENST00000542230 ADAMTS7Q9UKP4 1686 aa21.63■■□□□ 1.05
TMEM50B-210ENST00000542230 ZNF790Q6PG37 636 aa21.63■■□□□ 1.05
TMEM50B-210ENST00000542230 DCTPP1Q9H773 170 aa21.62■■□□□ 1.05
TMEM50B-210ENST00000542230 ABCC6O95255 1503 aa21.62■■□□□ 1.05
TMEM50B-210ENST00000542230 PI4KAP2A4QPH2 592 aa21.62■■□□□ 1.05
TMEM50B-210ENST00000542230 HOXB7P09629 217 aa21.62■■□□□ 1.05
TMEM50B-210ENST00000542230 C16orf71Q8IYS4 520 aaPredicted RBP21.62■■□□□ 1.05
TMEM50B-210ENST00000542230 PI4KAP1Q8N8J0 262 aa21.62■■□□□ 1.05
TMEM50B-210ENST00000542230 CACNA1FO60840 1977 aa21.61■■□□□ 1.05
TMEM50B-210ENST00000542230 SCN11AQ9UI33 1791 aa21.61■■□□□ 1.05
TMEM50B-210ENST00000542230 USP44Q9H0E7 712 aa21.61■■□□□ 1.05
TMEM50B-210ENST00000542230 ZNF496Q96IT1 587 aaPredicted RBP21.6■■□□□ 1.05
TMEM50B-210ENST00000542230 SMARCA5O60264 1052 aaPredicted RBP21.6■■□□□ 1.05
TMEM50B-210ENST00000542230 EVA1CP58658 441 aa21.6■■□□□ 1.05
TMEM50B-210ENST00000542230 RPAP2Q8IXW5 612 aaPredicted RBP21.6■■□□□ 1.05
TMEM50B-210ENST00000542230 DCAF5Q96JK2 942 aa21.6■■□□□ 1.05
TMEM50B-210ENST00000542230 NOP58Q9Y2X3 529 aaKnown RBP21.6■■□□□ 1.05
TMEM50B-210ENST00000542230 PIP4K2AP48426 406 aaPredicted RBP21.59■■□□□ 1.05
TMEM50B-210ENST00000542230 OTUD7AQ8TE49 926 aaPredicted RBP21.59■■□□□ 1.05
TMEM50B-210ENST00000542230 ZCRB1Q8TBF4 217 aaKnown RBP21.58■■□□□ 1.05
TMEM50B-210ENST00000542230 DDX54Q8TDD1 881 aaKnown RBP21.58■■□□□ 1.05
TMEM50B-210ENST00000542230 BTG4Q9NY30 223 aa21.58■■□□□ 1.05
TMEM50B-210ENST00000542230 ADCY9O60503 1353 aa21.58■■□□□ 1.05
TMEM50B-210ENST00000542230 ROBO1Q9Y6N7 1651 aa21.58■■□□□ 1.04
TMEM50B-210ENST00000542230 PNMA6EA0A0J9YXQ4 647 aa21.58■■□□□ 1.04
TMEM50B-210ENST00000542230 SLC4A3P48751 1232 aa21.58■■□□□ 1.04
TMEM50B-210ENST00000542230 PDIA6Q15084 440 aa21.58■■□□□ 1.04
TMEM50B-210ENST00000542230 DBF4Q9UBU7 674 aaPredicted RBP21.58■■□□□ 1.04
TMEM50B-210ENST00000542230 LRRFIP2Q9Y608 721 aaKnown RBP21.58■■□□□ 1.04
TMEM50B-210ENST00000542230 GNAI2P04899 355 aa21.57■■□□□ 1.04
TMEM50B-210ENST00000542230 CARD10Q9BWT7 1032 aa21.57■■□□□ 1.04
TMEM50B-210ENST00000542230 PKD1L3Q7Z443 1732 aa21.57■■□□□ 1.04
TMEM50B-210ENST00000542230 ZBTB47Q9UFB7 747 aaPredicted RBP21.56■■□□□ 1.04
TMEM50B-210ENST00000542230 USP16Q9Y5T5 823 aa21.56■■□□□ 1.04
TMEM50B-210ENST00000542230 CABP4P57796 275 aa21.55■■□□□ 1.04
TMEM50B-210ENST00000542230 AIMP1Q12904 312 aaKnown RBP21.55■■□□□ 1.04
TMEM50B-210ENST00000542230 BEND3Q5T5X7 828 aa21.55■■□□□ 1.04
TMEM50B-210ENST00000542230 DNAAF4Q8WXU2 420 aa21.55■■□□□ 1.04
TMEM50B-210ENST00000542230 NBPF7P0C2Y1 421 aaPredicted RBP21.55■■□□□ 1.04
TMEM50B-210ENST00000542230 IL2RBP14784 551 aa21.55■■□□□ 1.04
TMEM50B-210ENST00000542230 LTBP4Q8N2S1 1624 aa21.55■■□□□ 1.04
TMEM50B-210ENST00000542230 MYL6BP14649 208 aa21.54■■□□□ 1.04
TMEM50B-210ENST00000542230 SRCIN1Q9C0H9 1055 aa21.54■■□□□ 1.04
TMEM50B-210ENST00000542230 EXOC6BQ9Y2D4 811 aa21.54■■□□□ 1.04
TMEM50B-210ENST00000542230 MAP3K2Q9Y2U5 619 aa21.54■■□□□ 1.04
TMEM50B-210ENST00000542230 C5P01031 1676 aa21.53■■□□□ 1.04
TMEM50B-210ENST00000542230 GNAI3P08754 354 aa21.52■■□□□ 1.04
TMEM50B-210ENST00000542230 PLEKHM2Q8IWE5 1019 aa21.52■■□□□ 1.04
TMEM50B-210ENST00000542230 PCDH11XQ9BZA7 1347 aa21.52■■□□□ 1.03
TMEM50B-210ENST00000542230 PCDH11YQ9BZA8 1340 aa21.52■■□□□ 1.03
TMEM50B-210ENST00000542230 UBTFL1P0CB47 393 aaPredicted RBP21.51■■□□□ 1.03
TMEM50B-210ENST00000542230 CWF19L2Q2TBE0 894 aaKnown RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms