RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 CCER1Q8TC90 406 aaPredicted RBP22.29■■□□□ 1.16
TRIM65-203ENST00000540812 C1QTNF8P60827 252 aa22.28■■□□□ 1.16
TRIM65-203ENST00000540812 MORC1Q86VD1 984 aa22.28■■□□□ 1.16
TRIM65-203ENST00000540812 SLC4A9Q96Q91 983 aa22.28■■□□□ 1.16
TRIM65-203ENST00000540812 KDRP35968 1356 aa22.27■■□□□ 1.16
TRIM65-203ENST00000540812 AEBP1Q8IUX7 1158 aa22.27■■□□□ 1.16
TRIM65-203ENST00000540812 KDM6AO15550 1401 aaPredicted RBP22.26■■□□□ 1.15
TRIM65-203ENST00000540812 ERVV-2B6SEH9 535 aa22.26■■□□□ 1.15
TRIM65-203ENST00000540812 PLEKHO1Q53GL0 409 aaPredicted RBP22.26■■□□□ 1.15
TRIM65-203ENST00000540812 ZNF530Q6P9A1 599 aaPredicted RBP22.26■■□□□ 1.15
TRIM65-203ENST00000540812 DCAF5Q96JK2 942 aa22.25■■□□□ 1.15
TRIM65-203ENST00000540812 HSP90AB1P08238 724 aaKnown RBP22.24■■□□□ 1.15
TRIM65-203ENST00000540812 WWC3Q9ULE0 1092 aa22.24■■□□□ 1.15
TRIM65-203ENST00000540812 RBM42Q9BTD8 480 aaKnown RBP22.23■■□□□ 1.15
TRIM65-203ENST00000540812 SENP3-EIF4A1A0A087X0R7 540 aa22.22■■□□□ 1.15
TRIM65-203ENST00000540812 GIGYF1O75420 1035 aaPredicted RBP22.22■■□□□ 1.15
TRIM65-203ENST00000540812 AMOTQ4VCS5 1084 aa22.22■■□□□ 1.15
TRIM65-203ENST00000540812 KNSTRNQ9Y448 316 aa22.22■■□□□ 1.15
TRIM65-203ENST00000540812 SULT6B1Q6IMI4 303 aa22.21■■□□□ 1.15
TRIM65-203ENST00000540812 MMP10P09238 476 aa22.2■■□□□ 1.14
TRIM65-203ENST00000540812 IL13P35225 146 aa22.2■■□□□ 1.14
TRIM65-203ENST00000540812 CABP4P57796 275 aa22.2■■□□□ 1.14
TRIM65-203ENST00000540812 MTHFSP49914 203 aa22.19■■□□□ 1.14
TRIM65-203ENST00000540812 AMER1Q5JTC6 1135 aaPredicted RBP22.19■■□□□ 1.14
TRIM65-203ENST00000540812 TRAPPC3LQ5T215 181 aa22.19■■□□□ 1.14
TRIM65-203ENST00000540812 RTCBQ9Y3I0 505 aaKnown RBP22.19■■□□□ 1.14
TRIM65-203ENST00000540812 ATP10DQ9P241 1426 aa22.19■■□□□ 1.14
TRIM65-203ENST00000540812 ZNF831Q5JPB2 1677 aa22.17■■□□□ 1.14
TRIM65-203ENST00000540812 KIF7Q2M1P5 1343 aa22.17■■□□□ 1.14
TRIM65-203ENST00000540812 CNTNAP4Q9C0A0 1308 aa22.17■■□□□ 1.14
TRIM65-203ENST00000540812 C1orf141Q5JVX7 400 aa22.17■■□□□ 1.14
TRIM65-203ENST00000540812 RC3H1Q5TC82 1133 aaKnown RBP22.17■■□□□ 1.14
TRIM65-203ENST00000540812 ARHGEF1Q92888 912 aaKnown RBP22.16■■□□□ 1.14
TRIM65-203ENST00000540812 COL5A3P25940 1745 aaPredicted RBP22.16■■□□□ 1.14
TRIM65-203ENST00000540812 PTCD1O75127 700 aaKnown RBP22.15■■□□□ 1.14
TRIM65-203ENST00000540812 NFATC2IPQ8NCF5 419 aa22.15■■□□□ 1.14
TRIM65-203ENST00000540812 ADCY9O60503 1353 aa22.14■■□□□ 1.14
TRIM65-203ENST00000540812 RPS6KA4O75676 772 aa22.14■■□□□ 1.13
TRIM65-203ENST00000540812 ADRA2BP18089 450 aa22.14■■□□□ 1.13
TRIM65-203ENST00000540812 MYH14Q7Z406 1995 aaKnown RBP22.14■■□□□ 1.13
TRIM65-203ENST00000540812 CICQ96RK0 1608 aaPredicted RBP22.13■■□□□ 1.13
TRIM65-203ENST00000540812 NLGN1Q8N2Q7 840 aa22.13■■□□□ 1.13
TRIM65-203ENST00000540812 PXDNLA1KZ92 1463 aa22.13■■□□□ 1.13
TRIM65-203ENST00000540812 CEP350Q5VT06 3117 aa22.12■■□□□ 1.13
TRIM65-203ENST00000540812 GYS1P13807 737 aa22.12■■□□□ 1.13
TRIM65-203ENST00000540812 RFC4P35249 363 aa22.11■■□□□ 1.13
TRIM65-203ENST00000540812 CRKLP46109 303 aaKnown RBP22.1■■□□□ 1.13
TRIM65-203ENST00000540812 C10orf71Q711Q0 1435 aa22.1■■□□□ 1.13
TRIM65-203ENST00000540812 ZNF526Q8TF50 670 aaPredicted RBP22.1■■□□□ 1.13
TRIM65-203ENST00000540812 KIAA1551Q9HCM1 1747 aa22.1■■□□□ 1.13
TRIM65-203ENST00000540812 KIF13BQ9NQT8 1826 aa22.09■■□□□ 1.13
TRIM65-203ENST00000540812 A0A0G2JLW4 131 aa22.09■■□□□ 1.13
TRIM65-203ENST00000540812 HMOX1P09601 288 aa22.09■■□□□ 1.13
TRIM65-203ENST00000540812 AKAP4Q5JQC9 854 aa22.09■■□□□ 1.13
TRIM65-203ENST00000540812 GPBP1L1Q9HC44 474 aaPredicted RBP22.09■■□□□ 1.13
TRIM65-203ENST00000540812 PER1O15534 1290 aaPredicted RBP22.08■■□□□ 1.13
TRIM65-203ENST00000540812 LGR6Q9HBX8 967 aa22.08■■□□□ 1.13
TRIM65-203ENST00000540812 SRP68Q9UHB9 627 aaKnown RBP22.08■■□□□ 1.13
TRIM65-203ENST00000540812 C4AP0C0L4 1744 aa22.08■■□□□ 1.12
TRIM65-203ENST00000540812 SCN11AQ9UI33 1791 aa22.07■■□□□ 1.12
TRIM65-203ENST00000540812 TJP1Q07157 1748 aa22.07■■□□□ 1.12
TRIM65-203ENST00000540812 TGFB2P61812 414 aa22.07■■□□□ 1.12
TRIM65-203ENST00000540812 CCDC87Q9NVE4 849 aa22.07■■□□□ 1.12
TRIM65-203ENST00000540812 N4BP2Q86UW6 1770 aaPredicted RBP22.07■■□□□ 1.12
TRIM65-203ENST00000540812 DPEP1P16444 411 aa22.06■■□□□ 1.12
TRIM65-203ENST00000540812 CC2D1BQ5T0F9 858 aaKnown RBP22.06■■□□□ 1.12
TRIM65-203ENST00000540812 SLC52A2Q9HAB3 445 aa22.06■■□□□ 1.12
TRIM65-203ENST00000540812 PARP3Q9Y6F1 533 aa22.06■■□□□ 1.12
TRIM65-203ENST00000540812 FKBP8Q14318 412 aa22.05■■□□□ 1.12
TRIM65-203ENST00000540812 INTS5Q6P9B9 1019 aaKnown RBP22.05■■□□□ 1.12
TRIM65-203ENST00000540812 DNAJC10Q8IXB1 793 aa22.05■■□□□ 1.12
TRIM65-203ENST00000540812 BCS1LQ9Y276 419 aa22.05■■□□□ 1.12
TRIM65-203ENST00000540812 RNMTO43148 476 aaKnown RBP22.04■■□□□ 1.12
TRIM65-203ENST00000540812 USP42Q9H9J4 1324 aaKnown RBP22.04■■□□□ 1.12
TRIM65-203ENST00000540812 DDR1Q08345 913 aa22.03■■□□□ 1.12
TRIM65-203ENST00000540812 SLC39A6Q13433 755 aa22.03■■□□□ 1.12
TRIM65-203ENST00000540812 MTHFSDQ2M296 383 aaKnown RBP22.03■■□□□ 1.12
TRIM65-203ENST00000540812 MRC1P22897 1456 aa22.03■■□□□ 1.12
TRIM65-203ENST00000540812 DIAPH1O60610 1272 aaKnown RBP22.02■■□□□ 1.12
TRIM65-203ENST00000540812 KCNA3P22001 575 aa22■■□□□ 1.11
TRIM65-203ENST00000540812 CNGB1Q14028 1251 aaPredicted RBP22■■□□□ 1.11
TRIM65-203ENST00000540812 ADAMTS7Q9UKP4 1686 aa22■■□□□ 1.11
TRIM65-203ENST00000540812 SOS1Q07889 1333 aaPredicted RBP22■■□□□ 1.11
TRIM65-203ENST00000540812 FCHSD2O94868 740 aa21.99■■□□□ 1.11
TRIM65-203ENST00000540812 ARHGAP27Q6ZUM4 889 aa21.99■■□□□ 1.11
TRIM65-203ENST00000540812 KCPQ6ZWJ8 1503 aa21.99■■□□□ 1.11
TRIM65-203ENST00000540812 COL3A1P02461 1466 aaPredicted RBP21.98■■□□□ 1.11
TRIM65-203ENST00000540812 CYP19A1P11511 503 aaPredicted RBP21.98■■□□□ 1.11
TRIM65-203ENST00000540812 BRCA1P38398 1863 aaKnown RBP21.97■■□□□ 1.11
TRIM65-203ENST00000540812 KIF3CO14782 793 aa21.97■■□□□ 1.11
TRIM65-203ENST00000540812 POLRMTO00411 1230 aaKnown RBP21.96■■□□□ 1.11
TRIM65-203ENST00000540812 TM4SF1P30408 202 aa21.96■■□□□ 1.11
TRIM65-203ENST00000540812 USPL1Q5W0Q7 1092 aa21.96■■□□□ 1.11
TRIM65-203ENST00000540812 VIRMAQ69YN4 1812 aaKnown RBP21.96■■□□□ 1.11
TRIM65-203ENST00000540812 ZPR1O75312 459 aa21.95■■□□□ 1.1
TRIM65-203ENST00000540812 ZBTB1Q9Y2K1 713 aa21.95■■□□□ 1.1
TRIM65-203ENST00000540812 NPC1L1Q9UHC9 1359 aa21.95■■□□□ 1.1
TRIM65-203ENST00000540812 PIM2Q9P1W9 311 aa21.94■■□□□ 1.1
TRIM65-203ENST00000540812 CHRNA5P30532 468 aa21.93■■□□□ 1.1
TRIM65-203ENST00000540812 COL15A1P39059 1388 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms