RNA–Protein interactions for RNA: ENST00000540585.1

NHLRC4-202, Transcript of NHL repeat containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC4, Length 2,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4-202ENST00000540585 ARHGAP45Q92619 1136 aa27.71■■■□□ 2.03
NHLRC4-202ENST00000540585 STRN4Q9NRL3 753 aa27.71■■■□□ 2.03
NHLRC4-202ENST00000540585 WDR17Q8IZU2 1322 aa27.7■■■□□ 2.02
NHLRC4-202ENST00000540585 FNBP4Q8N3X1 1017 aaPredicted RBP27.69■■■□□ 2.02
NHLRC4-202ENST00000540585 BCL9LQ86UU0 1499 aa27.69■■■□□ 2.02
NHLRC4-202ENST00000540585 RTF1Q92541 710 aaKnown RBP27.69■■■□□ 2.02
NHLRC4-202ENST00000540585 CSB-PGBD3P0DP91 1061 aa27.68■■■□□ 2.02
NHLRC4-202ENST00000540585 EVA1CP58658 441 aa27.68■■■□□ 2.02
NHLRC4-202ENST00000540585 NBPF6Q5VWK0 638 aa27.68■■■□□ 2.02
NHLRC4-202ENST00000540585 LARP1Q6PKG0 1096 aaKnown RBP27.68■■■□□ 2.02
NHLRC4-202ENST00000540585 NBPF4Q96M43 638 aa27.68■■■□□ 2.02
NHLRC4-202ENST00000540585 LRRC37A3O60309 1634 aa27.66■■■□□ 2.02
NHLRC4-202ENST00000540585 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.66■■■□□ 2.02
NHLRC4-202ENST00000540585 AFF2P51816 1311 aa27.65■■■□□ 2.02
NHLRC4-202ENST00000540585 FAM161AQ3B820 660 aa27.65■■■□□ 2.02
NHLRC4-202ENST00000540585 ZBTB40Q9NUA8 1239 aa27.65■■■□□ 2.02
NHLRC4-202ENST00000540585 UNC5CLQ8IV45 518 aa27.64■■■□□ 2.02
NHLRC4-202ENST00000540585 NLRP2Q9NX02 1062 aa27.64■■■□□ 2.02
NHLRC4-202ENST00000540585 USHBP1Q8N6Y0 703 aa27.64■■■□□ 2.01
NHLRC4-202ENST00000540585 NCAPD2Q15021 1401 aa27.64■■■□□ 2.01
NHLRC4-202ENST00000540585 HTATSF1O43719 755 aaKnown RBP27.63■■■□□ 2.01
NHLRC4-202ENST00000540585 TOM1L2Q6ZVM7 507 aa27.63■■■□□ 2.01
NHLRC4-202ENST00000540585 FAM43AQ8N2R8 423 aa27.63■■■□□ 2.01
NHLRC4-202ENST00000540585 USP21Q9UK80 565 aa27.63■■■□□ 2.01
NHLRC4-202ENST00000540585 ABCC4O15439 1325 aa27.62■■■□□ 2.01
NHLRC4-202ENST00000540585 HDAC1Q13547 482 aaPredicted RBP27.62■■■□□ 2.01
NHLRC4-202ENST00000540585 KRT24Q2M2I5 525 aa27.62■■■□□ 2.01
NHLRC4-202ENST00000540585 C8orf34Q49A92 452 aa27.62■■■□□ 2.01
NHLRC4-202ENST00000540585 GNAT3A8MTJ3 354 aa27.6■■■□□ 2.01
NHLRC4-202ENST00000540585 CARD10Q9BWT7 1032 aa27.6■■■□□ 2.01
NHLRC4-202ENST00000540585 API5Q9BZZ5 524 aaKnown RBP27.6■■■□□ 2.01
NHLRC4-202ENST00000540585 MAP3K5Q99683 1374 aa27.59■■■□□ 2.01
NHLRC4-202ENST00000540585 PDZRN3Q9UPQ7 1066 aa27.59■■■□□ 2.01
NHLRC4-202ENST00000540585 TSPYL4Q9UJ04 414 aa27.58■■■□□ 2.01
NHLRC4-202ENST00000540585 CHMP4BQ9H444 224 aaKnown RBP27.57■■■□□ 2
NHLRC4-202ENST00000540585 MIS18AQ9NYP9 233 aa27.57■■■□□ 2
NHLRC4-202ENST00000540585 VIRMAQ69YN4 1812 aaKnown RBP27.56■■■□□ 2
NHLRC4-202ENST00000540585 VPS72Q15906 364 aa27.56■■■□□ 2
NHLRC4-202ENST00000540585 SPATA31A5Q5VU36 1347 aa27.55■■■□□ 2
NHLRC4-202ENST00000540585 SPATA31A7Q8IWB4 1347 aa27.55■■■□□ 2
NHLRC4-202ENST00000540585 SPATA31A1Q5TZJ5 1347 aa27.55■■■□□ 2
NHLRC4-202ENST00000540585 ZBTB7BO15156 539 aaPredicted RBP27.54■■■□□ 2
NHLRC4-202ENST00000540585 ATRNO75882 1429 aa27.53■■■□□ 2
NHLRC4-202ENST00000540585 CCDC9Q9Y3X0 531 aaKnown RBP27.53■■■□□ 2
NHLRC4-202ENST00000540585 WNK3Q9BYP7 1800 aa27.52■■■□□ 2
NHLRC4-202ENST00000540585 RGS12O14924 1447 aa27.51■■□□□ 1.99
NHLRC4-202ENST00000540585 MEGF6O75095 1541 aa27.51■■□□□ 1.99
NHLRC4-202ENST00000540585 SMC5Q8IY18 1101 aa27.5■■□□□ 1.99
NHLRC4-202ENST00000540585 IL17REQ8NFR9 667 aa27.5■■□□□ 1.99
NHLRC4-202ENST00000540585 TRPC5Q9UL62 973 aaPredicted RBP27.5■■□□□ 1.99
NHLRC4-202ENST00000540585 PTPRCP08575 1304 aa27.49■■□□□ 1.99
NHLRC4-202ENST00000540585 GLI3P10071 1580 aa27.49■■□□□ 1.99
NHLRC4-202ENST00000540585 EIF5BO60841 1220 aaKnown RBP27.48■■□□□ 1.99
NHLRC4-202ENST00000540585 DAXXQ9UER7 740 aaPredicted RBP27.48■■□□□ 1.99
NHLRC4-202ENST00000540585 PARP4Q9UKK3 1724 aaKnown RBP27.48■■□□□ 1.99
NHLRC4-202ENST00000540585 DISP2A7MBM2 1401 aa27.47■■□□□ 1.99
NHLRC4-202ENST00000540585 RAPGEF4Q8WZA2 1011 aa27.47■■□□□ 1.99
NHLRC4-202ENST00000540585 QTRT2Q9H974 415 aaKnown RBP27.47■■□□□ 1.99
NHLRC4-202ENST00000540585 BABAM1Q9NWV8 329 aa27.47■■□□□ 1.99
NHLRC4-202ENST00000540585 ZNF772Q68DY9 489 aaPredicted RBP27.47■■□□□ 1.99
NHLRC4-202ENST00000540585 THRAP3Q9Y2W1 955 aaKnown RBP27.47■■□□□ 1.99
NHLRC4-202ENST00000540585 IL2RBP14784 551 aa27.45■■□□□ 1.99
NHLRC4-202ENST00000540585 INTS3Q68E01 1043 aaKnown RBP27.45■■□□□ 1.99
NHLRC4-202ENST00000540585 GJD4Q96KN9 370 aaPredicted RBP27.45■■□□□ 1.99
NHLRC4-202ENST00000540585 RGS17Q9UGC6 210 aaPredicted RBP27.45■■□□□ 1.99
NHLRC4-202ENST00000540585 CEMIPQ8WUJ3 1361 aa27.45■■□□□ 1.98
NHLRC4-202ENST00000540585 OVOS2A0A0G2JMS6 1433 aa27.44■■□□□ 1.98
NHLRC4-202ENST00000540585 TATP17735 454 aaPredicted RBP27.44■■□□□ 1.98
NHLRC4-202ENST00000540585 TAF7Q15545 349 aaPredicted RBP27.44■■□□□ 1.98
NHLRC4-202ENST00000540585 C1orf115Q9H7X2 142 aa27.44■■□□□ 1.98
NHLRC4-202ENST00000540585 SLC4A2P04920 1241 aa27.44■■□□□ 1.98
NHLRC4-202ENST00000540585 BARGINQ6ZT62 677 aa27.44■■□□□ 1.98
NHLRC4-202ENST00000540585 SLC4A3P48751 1232 aa27.43■■□□□ 1.98
NHLRC4-202ENST00000540585 PKD1L3Q7Z443 1732 aa27.43■■□□□ 1.98
NHLRC4-202ENST00000540585 SOS1Q07889 1333 aaPredicted RBP27.41■■□□□ 1.98
NHLRC4-202ENST00000540585 FAM98CQ17RN3 349 aaKnown RBP27.4■■□□□ 1.98
NHLRC4-202ENST00000540585 PLEKHG2Q9H7P9 1386 aa27.4■■□□□ 1.98
NHLRC4-202ENST00000540585 FRAT2O75474 233 aaPredicted RBP27.4■■□□□ 1.98
NHLRC4-202ENST00000540585 PLEKHO1Q53GL0 409 aaPredicted RBP27.4■■□□□ 1.98
NHLRC4-202ENST00000540585 NUCB1Q02818 461 aa27.39■■□□□ 1.98
NHLRC4-202ENST00000540585 SHANK3Q9BYB0 1731 aa27.39■■□□□ 1.98
NHLRC4-202ENST00000540585 AMOTQ4VCS5 1084 aa27.39■■□□□ 1.97
NHLRC4-202ENST00000540585 ZNF530Q6P9A1 599 aaPredicted RBP27.39■■□□□ 1.97
NHLRC4-202ENST00000540585 THSD7AQ9UPZ6 1657 aa27.39■■□□□ 1.97
NHLRC4-202ENST00000540585 STK31Q9BXU1 1019 aa27.38■■□□□ 1.97
NHLRC4-202ENST00000540585 AKAP4Q5JQC9 854 aa27.37■■□□□ 1.97
NHLRC4-202ENST00000540585 CDCA7Q9BWT1 371 aaPredicted RBP27.37■■□□□ 1.97
NHLRC4-202ENST00000540585 CCDC30Q5VVM6 783 aa27.36■■□□□ 1.97
NHLRC4-202ENST00000540585 G2E3Q7L622 706 aa27.36■■□□□ 1.97
NHLRC4-202ENST00000540585 SIRT2Q8IXJ6 389 aa27.36■■□□□ 1.97
NHLRC4-202ENST00000540585 GCC1Q96CN9 775 aa27.36■■□□□ 1.97
NHLRC4-202ENST00000540585 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.36■■□□□ 1.97
NHLRC4-202ENST00000540585 KDM3BQ7LBC6 1761 aa27.36■■□□□ 1.97
NHLRC4-202ENST00000540585 POTEAQ6S8J7 498 aa27.35■■□□□ 1.97
NHLRC4-202ENST00000540585 ZCRB1Q8TBF4 217 aaKnown RBP27.35■■□□□ 1.97
NHLRC4-202ENST00000540585 LGR6Q9HBX8 967 aa27.35■■□□□ 1.97
NHLRC4-202ENST00000540585 SPG7Q9UQ90 795 aa27.34■■□□□ 1.97
NHLRC4-202ENST00000540585 RBM6P78332 1123 aaKnown RBP27.34■■□□□ 1.97
NHLRC4-202ENST00000540585 ONECUT3O60422 494 aaPredicted RBP27.33■■□□□ 1.97
NHLRC4-202ENST00000540585 CHD1LQ86WJ1 897 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms