RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 N4BP2Q86UW6 1770 aaPredicted RBP15.6■□□□□ 0.09
TMEM258-205ENST00000540434 MEGF6O75095 1541 aa15.6■□□□□ 0.09
TMEM258-205ENST00000540434 KCPQ6ZWJ8 1503 aa15.6■□□□□ 0.09
TMEM258-205ENST00000540434 A0A0G2JLW4 131 aa15.6■□□□□ 0.09
TMEM258-205ENST00000540434 USHBP1Q8N6Y0 703 aa15.6■□□□□ 0.09
TMEM258-205ENST00000540434 FLAD1Q8NFF5 587 aa15.6■□□□□ 0.09
TMEM258-205ENST00000540434 PXDNLA1KZ92 1463 aa15.59■□□□□ 0.09
TMEM258-205ENST00000540434 C9orf131Q5VYM1 1079 aa15.59■□□□□ 0.09
TMEM258-205ENST00000540434 MORC1Q86VD1 984 aa15.59■□□□□ 0.09
TMEM258-205ENST00000540434 INSRP06213 1382 aa15.59■□□□□ 0.09
TMEM258-205ENST00000540434 C4BP0C0L5 1744 aa15.58■□□□□ 0.08
TMEM258-205ENST00000540434 KIAA1551Q9HCM1 1747 aa15.58■□□□□ 0.08
TMEM258-205ENST00000540434 ITGB4P16144 1822 aa15.58■□□□□ 0.08
TMEM258-205ENST00000540434 RTL1A6NKG5 1358 aa15.58■□□□□ 0.08
TMEM258-205ENST00000540434 FLT4P35916 1363 aa15.58■□□□□ 0.08
TMEM258-205ENST00000540434 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.57■□□□□ 0.08
TMEM258-205ENST00000540434 AK7Q96M32 723 aa15.57■□□□□ 0.08
TMEM258-205ENST00000540434 KIF13BQ9NQT8 1826 aa15.57■□□□□ 0.08
TMEM258-205ENST00000540434 PALLDQ8WX93 1383 aa15.55■□□□□ 0.08
TMEM258-205ENST00000540434 EIF4A2Q14240 407 aaKnown RBP15.55■□□□□ 0.08
TMEM258-205ENST00000540434 KIF24Q5T7B8 1368 aa15.54■□□□□ 0.08
TMEM258-205ENST00000540434 FCHSD2O94868 740 aa15.54■□□□□ 0.08
TMEM258-205ENST00000540434 ZEB1P37275 1124 aaPredicted RBP15.54■□□□□ 0.08
TMEM258-205ENST00000540434 EYA1Q99502 592 aa15.54■□□□□ 0.08
TMEM258-205ENST00000540434 SMG6Q86US8 1419 aaKnown RBP15.53■□□□□ 0.08
TMEM258-205ENST00000540434 MMP10P09238 476 aa15.53■□□□□ 0.08
TMEM258-205ENST00000540434 DPEP1P16444 411 aa15.53■□□□□ 0.08
TMEM258-205ENST00000540434 FAM161AQ3B820 660 aa15.53■□□□□ 0.08
TMEM258-205ENST00000540434 NPC1L1Q9UHC9 1359 aa15.52■□□□□ 0.08
TMEM258-205ENST00000540434 HMGB2P26583 209 aaKnown RBP15.52■□□□□ 0.08
TMEM258-205ENST00000540434 MTHFSP49914 203 aa15.52■□□□□ 0.08
TMEM258-205ENST00000540434 DDX10Q13206 875 aaKnown RBP15.52■□□□□ 0.08
TMEM258-205ENST00000540434 MPRIPQ6WCQ1 1025 aa15.52■□□□□ 0.08
TMEM258-205ENST00000540434 SMC1BQ8NDV3 1235 aa15.52■□□□□ 0.08
TMEM258-205ENST00000540434 PKD1L3Q7Z443 1732 aa15.51■□□□□ 0.07
TMEM258-205ENST00000540434 BRCA1P38398 1863 aaKnown RBP15.51■□□□□ 0.07
TMEM258-205ENST00000540434 RNF181Q9P0P0 153 aa15.51■□□□□ 0.07
TMEM258-205ENST00000540434 KDM2BQ8NHM5 1336 aa15.5■□□□□ 0.07
TMEM258-205ENST00000540434 LINC00116Q8NCU8 138 aa15.5■□□□□ 0.07
TMEM258-205ENST00000540434 NCAPD2Q15021 1401 aa15.5■□□□□ 0.07
TMEM258-205ENST00000540434 FOXN1O15353 648 aa15.49■□□□□ 0.07
TMEM258-205ENST00000540434 TGFB2P61812 414 aa15.49■□□□□ 0.07
TMEM258-205ENST00000540434 PCDH10Q9P2E7 1040 aa15.49■□□□□ 0.07
TMEM258-205ENST00000540434 PLEKHG2Q9H7P9 1386 aa15.49■□□□□ 0.07
TMEM258-205ENST00000540434 KCNA3P22001 575 aa15.48■□□□□ 0.07
TMEM258-205ENST00000540434 SSFA2P28290 1259 aa15.48■□□□□ 0.07
TMEM258-205ENST00000540434 IL13P35225 146 aa15.48■□□□□ 0.07
TMEM258-205ENST00000540434 AEBP1Q8IUX7 1158 aa15.48■□□□□ 0.07
TMEM258-205ENST00000540434 CYP27B1O15528 508 aa15.47■□□□□ 0.07
TMEM258-205ENST00000540434 C10orf71Q711Q0 1435 aa15.47■□□□□ 0.07
TMEM258-205ENST00000540434 SMARCC1Q92922 1105 aaPredicted RBP15.47■□□□□ 0.07
TMEM258-205ENST00000540434 MKRN1Q9UHC7 482 aaKnown RBP15.47■□□□□ 0.07
TMEM258-205ENST00000540434 ARFGEF1Q9Y6D6 1849 aa15.46■□□□□ 0.07
TMEM258-205ENST00000540434 GNPATO15228 680 aa15.46■□□□□ 0.07
TMEM258-205ENST00000540434 RAPGEF4Q8WZA2 1011 aa15.46■□□□□ 0.07
TMEM258-205ENST00000540434 PIGBQ92521 554 aa15.46■□□□□ 0.07
TMEM258-205ENST00000540434 TNRC6CQ9HCJ0 1690 aaKnown RBP15.46■□□□□ 0.07
TMEM258-205ENST00000540434 TATP17735 454 aaPredicted RBP15.45■□□□□ 0.06
TMEM258-205ENST00000540434 PPP2R1AP30153 589 aa15.45■□□□□ 0.06
TMEM258-205ENST00000540434 ITPK1Q13572 414 aa15.45■□□□□ 0.06
TMEM258-205ENST00000540434 SBF1O95248 1867 aa15.45■□□□□ 0.06
TMEM258-205ENST00000540434 COL3A1P02461 1466 aaPredicted RBP15.45■□□□□ 0.06
TMEM258-205ENST00000540434 PCDH11XQ9BZA7 1347 aa15.44■□□□□ 0.06
TMEM258-205ENST00000540434 PCDH11YQ9BZA8 1340 aa15.44■□□□□ 0.06
TMEM258-205ENST00000540434 LOC102724428A0A0B4J2F2 783 aa15.43■□□□□ 0.06
TMEM258-205ENST00000540434 SIK1P57059 783 aa15.43■□□□□ 0.06
TMEM258-205ENST00000540434 RASSF7Q02833 373 aa15.43■□□□□ 0.06
TMEM258-205ENST00000540434 NKX1-1Q15270 411 aaPredicted RBP15.42■□□□□ 0.06
TMEM258-205ENST00000540434 DCAF5Q96JK2 942 aa15.42■□□□□ 0.06
TMEM258-205ENST00000540434 CCDC87Q9NVE4 849 aa15.41■□□□□ 0.06
TMEM258-205ENST00000540434 HMOX1P09601 288 aa15.4■□□□□ 0.06
TMEM258-205ENST00000540434 SULT6B1Q6IMI4 303 aa15.4■□□□□ 0.06
TMEM258-205ENST00000540434 PIM2Q9P1W9 311 aa15.4■□□□□ 0.06
TMEM258-205ENST00000540434 DIAPH1O60610 1272 aaKnown RBP15.39■□□□□ 0.05
TMEM258-205ENST00000540434 CHRNA5P30532 468 aa15.39■□□□□ 0.05
TMEM258-205ENST00000540434 PRDM10Q9NQV6 1147 aa15.39■□□□□ 0.05
TMEM258-205ENST00000540434 ASAP1Q9ULH1 1129 aa15.39■□□□□ 0.05
TMEM258-205ENST00000540434 C4AP0C0L4 1744 aa15.39■□□□□ 0.05
TMEM258-205ENST00000540434 ZNF316A6NFI3 1004 aaPredicted RBP15.38■□□□□ 0.05
TMEM258-205ENST00000540434 VEGFAP15692 232 aaPredicted RBP15.38■□□□□ 0.05
TMEM258-205ENST00000540434 ATP6V1AP38606 617 aa15.38■□□□□ 0.05
TMEM258-205ENST00000540434 DALRD3Q5D0E6 543 aaKnown RBP15.38■□□□□ 0.05
TMEM258-205ENST00000540434 ABHD8Q96I13 439 aa15.38■□□□□ 0.05
TMEM258-205ENST00000540434 KDRP35968 1356 aa15.37■□□□□ 0.05
TMEM258-205ENST00000540434 MYH14Q7Z406 1995 aaKnown RBP15.37■□□□□ 0.05
TMEM258-205ENST00000540434 POTECB2RU33 542 aa15.37■□□□□ 0.05
TMEM258-205ENST00000540434 GYS1P13807 737 aa15.37■□□□□ 0.05
TMEM258-205ENST00000540434 LBX1P52954 281 aa15.37■□□□□ 0.05
TMEM258-205ENST00000540434 NLGN1Q8N2Q7 840 aa15.37■□□□□ 0.05
TMEM258-205ENST00000540434 TRAPPC3LQ5T215 181 aa15.36■□□□□ 0.05
TMEM258-205ENST00000540434 ARHGEF1Q92888 912 aaKnown RBP15.36■□□□□ 0.05
TMEM258-205ENST00000540434 PARP3Q9Y6F1 533 aa15.36■□□□□ 0.05
TMEM258-205ENST00000540434 GLTPD2A6NH11 291 aa15.35■□□□□ 0.05
TMEM258-205ENST00000540434 PHKG2P15735 406 aa15.35■□□□□ 0.05
TMEM258-205ENST00000540434 ATG3Q9NT62 314 aa15.35■□□□□ 0.05
TMEM258-205ENST00000540434 ZNF831Q5JPB2 1677 aa15.35■□□□□ 0.05
TMEM258-205ENST00000540434 COL5A3P25940 1745 aaPredicted RBP15.34■□□□□ 0.05
TMEM258-205ENST00000540434 POTEIP0CG38 1075 aa15.34■□□□□ 0.05
TMEM258-205ENST00000540434 POTEJP0CG39 1038 aa15.34■□□□□ 0.05
TMEM258-205ENST00000540434 CTCFP49711 727 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 313.2 ms