RNA–Protein interactions for RNA: ENST00000540351.1

UBC-207, Transcript of ubiquitin C, humanhuman

TSL 1 (best)

Gene UBC, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-207ENST00000540351 SLC4A9Q96Q91 983 aa18.21■□□□□ 0.51
UBC-207ENST00000540351 TONSLQ96HA7 1378 aa18.2■□□□□ 0.5
UBC-207ENST00000540351 ZNF831Q5JPB2 1677 aa18.2■□□□□ 0.5
UBC-207ENST00000540351 COL13A1Q5TAT6 717 aaPredicted RBP18.2■□□□□ 0.5
UBC-207ENST00000540351 A0A0G2JLW4 131 aa18.19■□□□□ 0.5
UBC-207ENST00000540351 ATG3Q9NT62 314 aa18.19■□□□□ 0.5
UBC-207ENST00000540351 KIF20BQ96Q89 1820 aa18.19■□□□□ 0.5
UBC-207ENST00000540351 GNPATO15228 680 aa18.18■□□□□ 0.5
UBC-207ENST00000540351 HTRA3P83110 453 aa18.18■□□□□ 0.5
UBC-207ENST00000540351 RBM46Q8TBY0 533 aaKnown RBP18.18■□□□□ 0.5
UBC-207ENST00000540351 ARFGEF1Q9Y6D6 1849 aa18.18■□□□□ 0.5
UBC-207ENST00000540351 KLRG1Q96E93 195 aa18.17■□□□□ 0.5
UBC-207ENST00000540351 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.17■□□□□ 0.5
UBC-207ENST00000540351 EMILIN1Q9Y6C2 1016 aa18.17■□□□□ 0.5
UBC-207ENST00000540351 C4AP0C0L4 1744 aa18.17■□□□□ 0.5
UBC-207ENST00000540351 COL5A3P25940 1745 aaPredicted RBP18.17■□□□□ 0.5
UBC-207ENST00000540351 MYH14Q7Z406 1995 aaKnown RBP18.17■□□□□ 0.5
UBC-207ENST00000540351 DPEP1P16444 411 aa18.16■□□□□ 0.5
UBC-207ENST00000540351 CARD14Q9BXL6 1004 aa18.16■□□□□ 0.5
UBC-207ENST00000540351 GYS1P13807 737 aa18.15■□□□□ 0.5
UBC-207ENST00000540351 BCS1LQ9Y276 419 aa18.15■□□□□ 0.5
UBC-207ENST00000540351 PHKG2P15735 406 aa18.14■□□□□ 0.49
UBC-207ENST00000540351 ATP6V1AP38606 617 aa18.14■□□□□ 0.49
UBC-207ENST00000540351 EYA1Q99502 592 aa18.14■□□□□ 0.49
UBC-207ENST00000540351 NLGN1Q8N2Q7 840 aa18.13■□□□□ 0.49
UBC-207ENST00000540351 ARHGEF1Q92888 912 aaKnown RBP18.13■□□□□ 0.49
UBC-207ENST00000540351 TMOD3Q9NYL9 352 aa18.13■□□□□ 0.49
UBC-207ENST00000540351 WASHC2AQ641Q2 1341 aa18.13■□□□□ 0.49
UBC-207ENST00000540351 SBF1O95248 1867 aa18.12■□□□□ 0.49
UBC-207ENST00000540351 TMF1P82094 1093 aa18.12■□□□□ 0.49
UBC-207ENST00000540351 FSTL1Q12841 308 aa18.12■□□□□ 0.49
UBC-207ENST00000540351 RC3H1Q5TC82 1133 aaKnown RBP18.12■□□□□ 0.49
UBC-207ENST00000540351 C9orf131Q5VYM1 1079 aa18.12■□□□□ 0.49
UBC-207ENST00000540351 ARHGAP27Q6ZUM4 889 aa18.12■□□□□ 0.49
UBC-207ENST00000540351 SPG7Q9UQ90 795 aa18.12■□□□□ 0.49
UBC-207ENST00000540351 KCPQ6ZWJ8 1503 aa18.12■□□□□ 0.49
UBC-207ENST00000540351 SLC24A1O60721 1099 aa18.11■□□□□ 0.49
UBC-207ENST00000540351 DCAF5Q96JK2 942 aa18.11■□□□□ 0.49
UBC-207ENST00000540351 ADAMTS7Q9UKP4 1686 aa18.11■□□□□ 0.49
UBC-207ENST00000540351 PLEKHG2Q9H7P9 1386 aa18.1■□□□□ 0.49
UBC-207ENST00000540351 CNTNAP4Q9C0A0 1308 aa18.1■□□□□ 0.49
UBC-207ENST00000540351 FCHSD2O94868 740 aa18.09■□□□□ 0.49
UBC-207ENST00000540351 ADRA2BP18089 450 aa18.09■□□□□ 0.49
UBC-207ENST00000540351 TRAPPC3LQ5T215 181 aa18.09■□□□□ 0.49
UBC-207ENST00000540351 RTCBQ9Y3I0 505 aaKnown RBP18.09■□□□□ 0.49
UBC-207ENST00000540351 RPS6KA4O75676 772 aa18.08■□□□□ 0.48
UBC-207ENST00000540351 IFNL2Q8IZJ0 200 aa18.08■□□□□ 0.48
UBC-207ENST00000540351 KDM6AO15550 1401 aaPredicted RBP18.07■□□□□ 0.48
UBC-207ENST00000540351 CCDC87Q9NVE4 849 aa18.07■□□□□ 0.48
UBC-207ENST00000540351 TNRC6CQ9HCJ0 1690 aaKnown RBP18.06■□□□□ 0.48
UBC-207ENST00000540351 DDR1Q08345 913 aa18.06■□□□□ 0.48
UBC-207ENST00000540351 POLKQ9UBT6 870 aa18.06■□□□□ 0.48
UBC-207ENST00000540351 PRELPP51888 382 aa18.05■□□□□ 0.48
UBC-207ENST00000540351 ERVV-2B6SEH9 535 aa18.04■□□□□ 0.48
UBC-207ENST00000540351 RRAGCQ9HB90 399 aa18.03■□□□□ 0.48
UBC-207ENST00000540351 PIM2Q9P1W9 311 aa18.03■□□□□ 0.48
UBC-207ENST00000540351 USP42Q9H9J4 1324 aaKnown RBP18.02■□□□□ 0.48
UBC-207ENST00000540351 TJP1Q07157 1748 aa18.02■□□□□ 0.48
UBC-207ENST00000540351 EIF4A2Q14240 407 aaKnown RBP18.02■□□□□ 0.48
UBC-207ENST00000540351 FKBP8Q14318 412 aa18.02■□□□□ 0.48
UBC-207ENST00000540351 SRP68Q9UHB9 627 aaKnown RBP18.02■□□□□ 0.48
UBC-207ENST00000540351 PARP3Q9Y6F1 533 aa18.02■□□□□ 0.48
UBC-207ENST00000540351 TM4SF1P30408 202 aa18.01■□□□□ 0.47
UBC-207ENST00000540351 RNF181Q9P0P0 153 aa18.01■□□□□ 0.47
UBC-207ENST00000540351 KDM2BQ8NHM5 1336 aa18■□□□□ 0.47
UBC-207ENST00000540351 CHRNA5P30532 468 aa18■□□□□ 0.47
UBC-207ENST00000540351 RFC4P35249 363 aa18■□□□□ 0.47
UBC-207ENST00000540351 DALRD3Q5D0E6 543 aaKnown RBP18■□□□□ 0.47
UBC-207ENST00000540351 TNS4Q8IZW8 715 aa18■□□□□ 0.47
UBC-207ENST00000540351 NRXN2Q9P2S2 1712 aa17.99■□□□□ 0.47
UBC-207ENST00000540351 POLRMTO00411 1230 aaKnown RBP17.99■□□□□ 0.47
UBC-207ENST00000540351 RBM42Q9BTD8 480 aaKnown RBP17.99■□□□□ 0.47
UBC-207ENST00000540351 PPM1GO15355 546 aaPredicted RBP17.98■□□□□ 0.47
UBC-207ENST00000540351 CRKLP46109 303 aaKnown RBP17.98■□□□□ 0.47
UBC-207ENST00000540351 INTS5Q6P9B9 1019 aaKnown RBP17.98■□□□□ 0.47
UBC-207ENST00000540351 C16orf71Q8IYS4 520 aaPredicted RBP17.98■□□□□ 0.47
UBC-207ENST00000540351 SMC1BQ8NDV3 1235 aa17.98■□□□□ 0.47
UBC-207ENST00000540351 ZC3H4Q9UPT8 1303 aaKnown RBP17.98■□□□□ 0.47
UBC-207ENST00000540351 POTECB2RU33 542 aa17.97■□□□□ 0.47
UBC-207ENST00000540351 CAPN15O75808 1086 aa17.97■□□□□ 0.47
UBC-207ENST00000540351 DLEC1Q9Y238 1755 aa17.96■□□□□ 0.47
UBC-207ENST00000540351 AFDNP55196 1824 aaKnown RBP17.96■□□□□ 0.47
UBC-207ENST00000540351 RASSF7Q02833 373 aa17.96■□□□□ 0.47
UBC-207ENST00000540351 HSPA1AP0DMV8 641 aaKnown RBP17.95■□□□□ 0.46
UBC-207ENST00000540351 HSPA1BP0DMV9 641 aaKnown RBP17.95■□□□□ 0.46
UBC-207ENST00000540351 GLTPD2A6NH11 291 aa17.93■□□□□ 0.46
UBC-207ENST00000540351 HSP90AB1P08238 724 aaKnown RBP17.93■□□□□ 0.46
UBC-207ENST00000540351 CDCA8Q53HL2 280 aa17.93■□□□□ 0.46
UBC-207ENST00000540351 PTCD1O75127 700 aaKnown RBP17.92■□□□□ 0.46
UBC-207ENST00000540351 CCDC88AQ3V6T2 1871 aa17.91■□□□□ 0.46
UBC-207ENST00000540351 NFKBIEO00221 500 aa17.91■□□□□ 0.46
UBC-207ENST00000540351 BCL2L12Q9HB09 334 aa17.91■□□□□ 0.46
UBC-207ENST00000540351 TIAM2Q8IVF5 1701 aa17.91■□□□□ 0.46
UBC-207ENST00000540351 SOS1Q07889 1333 aaPredicted RBP17.91■□□□□ 0.46
UBC-207ENST00000540351 SCN11AQ9UI33 1791 aa17.9■□□□□ 0.46
UBC-207ENST00000540351 VEGFAP15692 232 aaPredicted RBP17.9■□□□□ 0.46
UBC-207ENST00000540351 LMNB1P20700 586 aa17.9■□□□□ 0.46
UBC-207ENST00000540351 CABP4P57796 275 aa17.9■□□□□ 0.46
UBC-207ENST00000540351 ZNF530Q6P9A1 599 aaPredicted RBP17.9■□□□□ 0.46
UBC-207ENST00000540351 AEBP1Q8IUX7 1158 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms