RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 MAP2P11137 1827 aaKnown RBP22.02■■□□□ 1.12
PUDP-206ENST00000540122 ITGB4P16144 1822 aa22.01■■□□□ 1.11
PUDP-206ENST00000540122 ITPK1Q13572 414 aa22■■□□□ 1.11
PUDP-206ENST00000540122 TNRC6CQ9HCJ0 1690 aaKnown RBP22■■□□□ 1.11
PUDP-206ENST00000540122 SMG6Q86US8 1419 aaKnown RBP21.99■■□□□ 1.11
PUDP-206ENST00000540122 BRCA1P38398 1863 aaKnown RBP21.99■■□□□ 1.11
PUDP-206ENST00000540122 CCDC87Q9NVE4 849 aa21.99■■□□□ 1.11
PUDP-206ENST00000540122 RNF181Q9P0P0 153 aa21.99■■□□□ 1.11
PUDP-206ENST00000540122 KCNA3P22001 575 aa21.98■■□□□ 1.11
PUDP-206ENST00000540122 RRS1Q15050 365 aaKnown RBP21.98■■□□□ 1.11
PUDP-206ENST00000540122 NLGN1Q8N2Q7 840 aa21.97■■□□□ 1.11
PUDP-206ENST00000540122 TMF1P82094 1093 aa21.96■■□□□ 1.11
PUDP-206ENST00000540122 DCAF5Q96JK2 942 aa21.96■■□□□ 1.11
PUDP-206ENST00000540122 C4AP0C0L4 1744 aa21.95■■□□□ 1.1
PUDP-206ENST00000540122 ARFGEF1Q9Y6D6 1849 aa21.95■■□□□ 1.1
PUDP-206ENST00000540122 ATP6V1AP38606 617 aa21.95■■□□□ 1.1
PUDP-206ENST00000540122 NKX1-1Q15270 411 aaPredicted RBP21.93■■□□□ 1.1
PUDP-206ENST00000540122 TRAPPC3LQ5T215 181 aa21.93■■□□□ 1.1
PUDP-206ENST00000540122 PIM2Q9P1W9 311 aa21.93■■□□□ 1.1
PUDP-206ENST00000540122 ASAP1Q9ULH1 1129 aa21.93■■□□□ 1.1
PUDP-206ENST00000540122 DALRD3Q5D0E6 543 aaKnown RBP21.92■■□□□ 1.1
PUDP-206ENST00000540122 RTCBQ9Y3I0 505 aaKnown RBP21.92■■□□□ 1.1
PUDP-206ENST00000540122 TMOD3Q9NYL9 352 aa21.91■■□□□ 1.1
PUDP-206ENST00000540122 PARP3Q9Y6F1 533 aa21.91■■□□□ 1.1
PUDP-206ENST00000540122 INSRP06213 1382 aa21.9■■□□□ 1.1
PUDP-206ENST00000540122 GYS1P13807 737 aa21.9■■□□□ 1.1
PUDP-206ENST00000540122 HSP90AB2PQ58FF8 381 aa21.9■■□□□ 1.1
PUDP-206ENST00000540122 PUS7Q96PZ0 661 aaKnown RBP21.9■■□□□ 1.1
PUDP-206ENST00000540122 ARHGEF1Q92888 912 aaKnown RBP21.89■■□□□ 1.09
PUDP-206ENST00000540122 ADRA2BP18089 450 aa21.87■■□□□ 1.09
PUDP-206ENST00000540122 ATG3Q9NT62 314 aa21.87■■□□□ 1.09
PUDP-206ENST00000540122 KDRP35968 1356 aa21.87■■□□□ 1.09
PUDP-206ENST00000540122 ZC3H4Q9UPT8 1303 aaKnown RBP21.86■■□□□ 1.09
PUDP-206ENST00000540122 VEGFAP15692 232 aaPredicted RBP21.86■■□□□ 1.09
PUDP-206ENST00000540122 CARD11Q9BXL7 1154 aa21.86■■□□□ 1.09
PUDP-206ENST00000540122 RFC4P35249 363 aa21.85■■□□□ 1.09
PUDP-206ENST00000540122 FLT4P35916 1363 aa21.85■■□□□ 1.09
PUDP-206ENST00000540122 SBF1O95248 1867 aa21.84■■□□□ 1.09
PUDP-206ENST00000540122 SPG7Q9UQ90 795 aa21.84■■□□□ 1.09
PUDP-206ENST00000540122 KDM6AO15550 1401 aaPredicted RBP21.83■■□□□ 1.09
PUDP-206ENST00000540122 GLTPD2A6NH11 291 aa21.83■■□□□ 1.09
PUDP-206ENST00000540122 CHRNA5P30532 468 aa21.83■■□□□ 1.09
PUDP-206ENST00000540122 RASSF7Q02833 373 aa21.83■■□□□ 1.09
PUDP-206ENST00000540122 SIN3AQ96ST3 1273 aa21.83■■□□□ 1.09
PUDP-206ENST00000540122 GGNBP2Q9H3C7 697 aa21.83■■□□□ 1.09
PUDP-206ENST00000540122 NCAPD2Q15021 1401 aa21.82■■□□□ 1.08
PUDP-206ENST00000540122 FYB1O15117 783 aa21.82■■□□□ 1.08
PUDP-206ENST00000540122 RC3H1Q5TC82 1133 aaKnown RBP21.82■■□□□ 1.08
PUDP-206ENST00000540122 SLC4A9Q96Q91 983 aa21.82■■□□□ 1.08
PUDP-206ENST00000540122 CNTNAP4Q9C0A0 1308 aa21.81■■□□□ 1.08
PUDP-206ENST00000540122 FOXN1O15353 648 aa21.81■■□□□ 1.08
PUDP-206ENST00000540122 KIF24Q5T7B8 1368 aa21.81■■□□□ 1.08
PUDP-206ENST00000540122 RPS6KA4O75676 772 aa21.8■■□□□ 1.08
PUDP-206ENST00000540122 DDR1Q08345 913 aa21.8■■□□□ 1.08
PUDP-206ENST00000540122 PRDM10Q9NQV6 1147 aa21.8■■□□□ 1.08
PUDP-206ENST00000540122 MKRN1Q9UHC7 482 aaKnown RBP21.8■■□□□ 1.08
PUDP-206ENST00000540122 PCDH10Q9P2E7 1040 aa21.79■■□□□ 1.08
PUDP-206ENST00000540122 PHKG2P15735 406 aa21.78■■□□□ 1.08
PUDP-206ENST00000540122 LMNB1P20700 586 aa21.78■■□□□ 1.08
PUDP-206ENST00000540122 ZNF831Q5JPB2 1677 aa21.78■■□□□ 1.08
PUDP-206ENST00000540122 COL5A3P25940 1745 aaPredicted RBP21.77■■□□□ 1.08
PUDP-206ENST00000540122 NEUROD1Q13562 356 aa21.77■■□□□ 1.08
PUDP-206ENST00000540122 RBM42Q9BTD8 480 aaKnown RBP21.77■■□□□ 1.08
PUDP-206ENST00000540122 CREBZFQ9NS37 354 aa21.77■■□□□ 1.08
PUDP-206ENST00000540122 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.77■■□□□ 1.08
PUDP-206ENST00000540122 FKBP8Q14318 412 aa21.76■■□□□ 1.07
PUDP-206ENST00000540122 FAM161AQ3B820 660 aa21.76■■□□□ 1.07
PUDP-206ENST00000540122 IFNL2Q8IZJ0 200 aa21.76■■□□□ 1.07
PUDP-206ENST00000540122 SRP68Q9UHB9 627 aaKnown RBP21.76■■□□□ 1.07
PUDP-206ENST00000540122 POTECB2RU33 542 aa21.75■■□□□ 1.07
PUDP-206ENST00000540122 USP42Q9H9J4 1324 aaKnown RBP21.74■■□□□ 1.07
PUDP-206ENST00000540122 TONSLQ96HA7 1378 aa21.74■■□□□ 1.07
PUDP-206ENST00000540122 TIAM2Q8IVF5 1701 aa21.73■■□□□ 1.07
PUDP-206ENST00000540122 TESK2Q96S53 571 aa21.73■■□□□ 1.07
PUDP-206ENST00000540122 EMILIN1Q9Y6C2 1016 aa21.73■■□□□ 1.07
PUDP-206ENST00000540122 POLRMTO00411 1230 aaKnown RBP21.72■■□□□ 1.07
PUDP-206ENST00000540122 CTCFP49711 727 aaPredicted RBP21.72■■□□□ 1.07
PUDP-206ENST00000540122 CNTNAP1P78357 1384 aa21.72■■□□□ 1.07
PUDP-206ENST00000540122 AIDAQ96BJ3 306 aa21.7■■□□□ 1.06
PUDP-206ENST00000540122 MYH14Q7Z406 1995 aaKnown RBP21.7■■□□□ 1.06
PUDP-206ENST00000540122 CHADLQ6NUI6 762 aa21.69■■□□□ 1.06
PUDP-206ENST00000540122 EYA1Q99502 592 aa21.69■■□□□ 1.06
PUDP-206ENST00000540122 TM4SF1P30408 202 aa21.68■■□□□ 1.06
PUDP-206ENST00000540122 ABHD8Q96I13 439 aa21.68■■□□□ 1.06
PUDP-206ENST00000540122 ERVV-2B6SEH9 535 aa21.67■■□□□ 1.06
PUDP-206ENST00000540122 NFKBIEO00221 500 aa21.67■■□□□ 1.06
PUDP-206ENST00000540122 CRKLP46109 303 aaKnown RBP21.67■■□□□ 1.06
PUDP-206ENST00000540122 KIF20BQ96Q89 1820 aa21.66■■□□□ 1.06
PUDP-206ENST00000540122 PPM1GO15355 546 aaPredicted RBP21.66■■□□□ 1.06
PUDP-206ENST00000540122 DPY19L2Q6NUT2 758 aa21.66■■□□□ 1.06
PUDP-206ENST00000540122 ST20-MTHFSA0A0A6YYL1 179 aa21.65■■□□□ 1.06
PUDP-206ENST00000540122 LBX1P52954 281 aa21.65■■□□□ 1.06
PUDP-206ENST00000540122 POTEIP0CG38 1075 aa21.64■■□□□ 1.05
PUDP-206ENST00000540122 POTEJP0CG39 1038 aa21.64■■□□□ 1.05
PUDP-206ENST00000540122 TTLL6Q8N841 843 aa21.64■■□□□ 1.05
PUDP-206ENST00000540122 WASHC2AQ641Q2 1341 aa21.63■■□□□ 1.05
PUDP-206ENST00000540122 VEGFBP49765 207 aa21.63■■□□□ 1.05
PUDP-206ENST00000540122 WBP1LQ9NX94 342 aa21.63■■□□□ 1.05
PUDP-206ENST00000540122 PTCD1O75127 700 aaKnown RBP21.62■■□□□ 1.05
PUDP-206ENST00000540122 ANKRD26Q9UPS8 1709 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms