RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 CUL4AQ13619 759 aa16.93■□□□□ 0.3
SCNN1A-215ENST00000540037 NECTIN2Q92692 538 aa16.93■□□□□ 0.3
SCNN1A-215ENST00000540037 FAM177BA6PVY3 158 aa16.92■□□□□ 0.3
SCNN1A-215ENST00000540037 NUDT16Q96DE0 195 aaKnown RBP16.92■□□□□ 0.3
SCNN1A-215ENST00000540037 OSBPL3Q9H4L5 887 aa16.92■□□□□ 0.3
SCNN1A-215ENST00000540037 PRDM10Q9NQV6 1147 aa16.92■□□□□ 0.3
SCNN1A-215ENST00000540037 CSPP1Q1MSJ5 1256 aa16.92■□□□□ 0.3
SCNN1A-215ENST00000540037 SASS6Q6UVJ0 657 aa16.92■□□□□ 0.3
SCNN1A-215ENST00000540037 USP25Q9UHP3 1055 aa16.92■□□□□ 0.3
SCNN1A-215ENST00000540037 PREX1Q8TCU6 1659 aa16.91■□□□□ 0.3
SCNN1A-215ENST00000540037 PTPRCP08575 1304 aa16.91■□□□□ 0.3
SCNN1A-215ENST00000540037 NUTM2FA1L443 756 aa16.91■□□□□ 0.3
SCNN1A-215ENST00000540037 HMMRO75330 724 aa16.91■□□□□ 0.3
SCNN1A-215ENST00000540037 MAP4K4O95819 1239 aaPredicted RBP16.91■□□□□ 0.3
SCNN1A-215ENST00000540037 CHMLP26374 656 aa16.91■□□□□ 0.3
SCNN1A-215ENST00000540037 HSP90AB2PQ58FF8 381 aa16.91■□□□□ 0.3
SCNN1A-215ENST00000540037 TCHHQ07283 1943 aa16.91■□□□□ 0.3
SCNN1A-215ENST00000540037 MCM5P33992 734 aa16.91■□□□□ 0.3
SCNN1A-215ENST00000540037 DNTTIP2Q5QJE6 756 aaKnown RBP16.91■□□□□ 0.3
SCNN1A-215ENST00000540037 PRDM4Q9UKN5 801 aa16.91■□□□□ 0.3
SCNN1A-215ENST00000540037 AATKQ6ZMQ8 1374 aa16.9■□□□□ 0.3
SCNN1A-215ENST00000540037 DYNC1I1O14576 645 aa16.9■□□□□ 0.3
SCNN1A-215ENST00000540037 MX1P20591 662 aa16.9■□□□□ 0.3
SCNN1A-215ENST00000540037 TTC12Q9H892 705 aaPredicted RBP16.9■□□□□ 0.3
SCNN1A-215ENST00000540037 SALL3Q9BXA9 1300 aa16.9■□□□□ 0.3
SCNN1A-215ENST00000540037 KIAA2012Q0VF49 1180 aa16.89■□□□□ 0.29
SCNN1A-215ENST00000540037 LRRCC1Q9C099 1032 aa16.88■□□□□ 0.29
SCNN1A-215ENST00000540037 IL1RAPL2Q9NP60 686 aa16.88■□□□□ 0.29
SCNN1A-215ENST00000540037 CNPY2Q9Y2B0 182 aa16.88■□□□□ 0.29
SCNN1A-215ENST00000540037 SRCIN1Q9C0H9 1055 aa16.88■□□□□ 0.29
SCNN1A-215ENST00000540037 GNAI2P04899 355 aa16.87■□□□□ 0.29
SCNN1A-215ENST00000540037 HCLS1P14317 486 aaPredicted RBP16.87■□□□□ 0.29
SCNN1A-215ENST00000540037 TSPYL4Q9UJ04 414 aa16.87■□□□□ 0.29
SCNN1A-215ENST00000540037 KIAA0232Q92628 1395 aa16.86■□□□□ 0.29
SCNN1A-215ENST00000540037 MAP7D2Q96T17 732 aa16.86■□□□□ 0.29
SCNN1A-215ENST00000540037 MCCP23508 829 aa16.86■□□□□ 0.29
SCNN1A-215ENST00000540037 MCM2P49736 904 aa16.86■□□□□ 0.29
SCNN1A-215ENST00000540037 NUTM1Q86Y26 1132 aa16.86■□□□□ 0.29
SCNN1A-215ENST00000540037 CCDC61Q9Y6R9 512 aa16.86■□□□□ 0.29
SCNN1A-215ENST00000540037 METP08581 1390 aa16.86■□□□□ 0.29
SCNN1A-215ENST00000540037 PLCB2Q00722 1185 aa16.86■□□□□ 0.29
SCNN1A-215ENST00000540037 INTS4Q96HW7 963 aaKnown RBP16.86■□□□□ 0.29
SCNN1A-215ENST00000540037 CRB1P82279 1406 aa16.85■□□□□ 0.29
SCNN1A-215ENST00000540037 PRR36Q9H6K5 1346 aa16.85■□□□□ 0.29
SCNN1A-215ENST00000540037 ADCY5O95622 1261 aa16.85■□□□□ 0.29
SCNN1A-215ENST00000540037 SYAP1Q96A49 352 aaPredicted RBP16.85■□□□□ 0.29
SCNN1A-215ENST00000540037 RPAP1Q9BWH6 1393 aaPredicted RBP16.84■□□□□ 0.29
SCNN1A-215ENST00000540037 CPA1P15085 419 aa16.84■□□□□ 0.29
SCNN1A-215ENST00000540037 MTHFSDQ2M296 383 aaKnown RBP16.84■□□□□ 0.29
SCNN1A-215ENST00000540037 LRRFIP2Q9Y608 721 aaKnown RBP16.84■□□□□ 0.29
SCNN1A-215ENST00000540037 CCT4P50991 539 aaKnown RBP16.84■□□□□ 0.29
SCNN1A-215ENST00000540037 ZNF710Q8N1W2 664 aa16.84■□□□□ 0.29
SCNN1A-215ENST00000540037 HAP1P54257 671 aaPredicted RBP16.83■□□□□ 0.29
SCNN1A-215ENST00000540037 FKBP5Q13451 457 aaPredicted RBP16.83■□□□□ 0.29
SCNN1A-215ENST00000540037 NOLC1Q14978 699 aaKnown RBP eCLIP16.83■□□□□ 0.29
SCNN1A-215ENST00000540037 MYRIPQ8NFW9 859 aa16.83■□□□□ 0.28
SCNN1A-215ENST00000540037 RIMBP3CA6NJZ7 1639 aa16.82■□□□□ 0.28
SCNN1A-215ENST00000540037 RIMBP3BA6NNM3 1639 aa16.82■□□□□ 0.28
SCNN1A-215ENST00000540037 RIMBP3Q9UFD9 1639 aa16.82■□□□□ 0.28
SCNN1A-215ENST00000540037 WDR33Q9C0J8 1336 aaKnown RBP16.82■□□□□ 0.28
SCNN1A-215ENST00000540037 AP5Z1O43299 807 aa16.82■□□□□ 0.28
SCNN1A-215ENST00000540037 FIBPO43427 364 aa16.82■□□□□ 0.28
SCNN1A-215ENST00000540037 ANAPC15P60006 121 aa16.82■□□□□ 0.28
SCNN1A-215ENST00000540037 MAP3K19Q56UN5 1328 aa16.82■□□□□ 0.28
SCNN1A-215ENST00000540037 GIMAP6Q6P9H5 292 aa16.81■□□□□ 0.28
SCNN1A-215ENST00000540037 RASEFQ8IZ41 740 aa16.81■□□□□ 0.28
SCNN1A-215ENST00000540037 PIBF1Q8WXW3 757 aa16.81■□□□□ 0.28
SCNN1A-215ENST00000540037 RIMS1Q86UR5 1692 aaKnown RBP16.81■□□□□ 0.28
SCNN1A-215ENST00000540037 FLIIQ13045 1269 aa16.81■□□□□ 0.28
SCNN1A-215ENST00000540037 TUBGCP6Q96RT7 1819 aa16.81■□□□□ 0.28
SCNN1A-215ENST00000540037 ATP8B2P98198 1209 aa16.8■□□□□ 0.28
SCNN1A-215ENST00000540037 PHF14O94880 888 aa16.8■□□□□ 0.28
SCNN1A-215ENST00000540037 MLECQ14165 292 aa16.8■□□□□ 0.28
SCNN1A-215ENST00000540037 LARGE1O95461 756 aa16.8■□□□□ 0.28
SCNN1A-215ENST00000540037 HSPA4P34932 840 aa16.8■□□□□ 0.28
SCNN1A-215ENST00000540037 CCDC183Q5T5S1 534 aa16.8■□□□□ 0.28
SCNN1A-215ENST00000540037 ZHX1Q9UKY1 873 aaPredicted RBP16.8■□□□□ 0.28
SCNN1A-215ENST00000540037 SYT1P21579 422 aa16.79■□□□□ 0.28
SCNN1A-215ENST00000540037 AK2P54819 239 aa16.79■□□□□ 0.28
SCNN1A-215ENST00000540037 RTF1Q92541 710 aaKnown RBP16.79■□□□□ 0.28
SCNN1A-215ENST00000540037 DLC1Q96QB1 1528 aa16.79■□□□□ 0.28
SCNN1A-215ENST00000540037 DDX54Q8TDD1 881 aaKnown RBP16.79■□□□□ 0.28
SCNN1A-215ENST00000540037 A2ML1A8K2U0 1454 aa16.79■□□□□ 0.28
SCNN1A-215ENST00000540037 RUFY3Q7L099 469 aa16.78■□□□□ 0.28
SCNN1A-215ENST00000540037 STK31Q9BXU1 1019 aa16.78■□□□□ 0.28
SCNN1A-215ENST00000540037 SPG7Q9UQ90 795 aa16.78■□□□□ 0.28
SCNN1A-215ENST00000540037 SNX14Q9Y5W7 946 aa16.78■□□□□ 0.28
SCNN1A-215ENST00000540037 TTC21BQ7Z4L5 1316 aa16.78■□□□□ 0.28
SCNN1A-215ENST00000540037 ZSCAN22P10073 491 aaPredicted RBP16.78■□□□□ 0.28
SCNN1A-215ENST00000540037 STAP2Q9UGK3 403 aa16.78■□□□□ 0.28
SCNN1A-215ENST00000540037 CCDC94Q9BW85 323 aaPredicted RBP16.78■□□□□ 0.28
SCNN1A-215ENST00000540037 SPC24Q8NBT2 197 aa16.77■□□□□ 0.28
SCNN1A-215ENST00000540037 USP44Q9H0E7 712 aa16.77■□□□□ 0.28
SCNN1A-215ENST00000540037 NEO1Q92859 1461 aa16.77■□□□□ 0.28
SCNN1A-215ENST00000540037 C3P01024 1663 aa16.77■□□□□ 0.28
SCNN1A-215ENST00000540037 SETD1AO15047 1707 aaKnown RBP16.77■□□□□ 0.27
SCNN1A-215ENST00000540037 STX6O43752 255 aa16.77■□□□□ 0.27
SCNN1A-215ENST00000540037 CBX1P83916 185 aa16.77■□□□□ 0.27
SCNN1A-215ENST00000540037 RICTORQ6R327 1708 aa16.77■□□□□ 0.27
SCNN1A-215ENST00000540037 PEAK1Q9H792 1746 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms