RNA–Protein interactions for RNA: ENST00000539927.1

C1RL-207, Transcript of complement C1r subcomponent like, humanhuman

TSL 2

Gene C1RL, Length 354 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-207ENST00000539927 COL5A3P25940 1745 aaPredicted RBP26.87■■□□□ 1.89
C1RL-207ENST00000539927 CEP350Q5VT06 3117 aa26.87■■□□□ 1.89
C1RL-207ENST00000539927 VIRMAQ69YN4 1812 aaKnown RBP26.86■■□□□ 1.89
C1RL-207ENST00000539927 ZNF526Q8TF50 670 aaPredicted RBP26.84■■□□□ 1.89
C1RL-207ENST00000539927 PCGF6Q9BYE7 350 aa26.84■■□□□ 1.89
C1RL-207ENST00000539927 ATG3Q9NT62 314 aa26.84■■□□□ 1.89
C1RL-207ENST00000539927 TIMELESSQ9UNS1 1208 aa26.84■■□□□ 1.89
C1RL-207ENST00000539927 ZNF831Q5JPB2 1677 aa26.82■■□□□ 1.88
C1RL-207ENST00000539927 GPBP1L1Q9HC44 474 aaPredicted RBP26.82■■□□□ 1.88
C1RL-207ENST00000539927 RBM42Q9BTD8 480 aaKnown RBP26.81■■□□□ 1.88
C1RL-207ENST00000539927 C4AP0C0L4 1744 aa26.81■■□□□ 1.88
C1RL-207ENST00000539927 KIAA1551Q9HCM1 1747 aa26.81■■□□□ 1.88
C1RL-207ENST00000539927 MMP10P09238 476 aa26.78■■□□□ 1.88
C1RL-207ENST00000539927 CICQ96RK0 1608 aaPredicted RBP26.78■■□□□ 1.88
C1RL-207ENST00000539927 BRCA1P38398 1863 aaKnown RBP26.78■■□□□ 1.88
C1RL-207ENST00000539927 ADCY9O60503 1353 aa26.77■■□□□ 1.88
C1RL-207ENST00000539927 SCN11AQ9UI33 1791 aa26.76■■□□□ 1.88
C1RL-207ENST00000539927 KDRP35968 1356 aa26.76■■□□□ 1.87
C1RL-207ENST00000539927 PANK3Q9H999 370 aa26.76■■□□□ 1.87
C1RL-207ENST00000539927 RTCBQ9Y3I0 505 aaKnown RBP26.76■■□□□ 1.87
C1RL-207ENST00000539927 ERVV-2B6SEH9 535 aa26.75■■□□□ 1.87
C1RL-207ENST00000539927 PLEKHO1Q53GL0 409 aaPredicted RBP26.75■■□□□ 1.87
C1RL-207ENST00000539927 TRAPPC3LQ5T215 181 aa26.75■■□□□ 1.87
C1RL-207ENST00000539927 SLC4A9Q96Q91 983 aa26.75■■□□□ 1.87
C1RL-207ENST00000539927 HSP90AB1P08238 724 aaKnown RBP26.74■■□□□ 1.87
C1RL-207ENST00000539927 ZNF530Q6P9A1 599 aaPredicted RBP26.74■■□□□ 1.87
C1RL-207ENST00000539927 HSPA5P11021 654 aaKnown RBP26.73■■□□□ 1.87
C1RL-207ENST00000539927 EIF4G2P78344 907 aaKnown RBP eCLIP26.73■■□□□ 1.87
C1RL-207ENST00000539927 DCAF5Q96JK2 942 aa26.73■■□□□ 1.87
C1RL-207ENST00000539927 CABP4P57796 275 aa26.72■■□□□ 1.87
C1RL-207ENST00000539927 KDM6AO15550 1401 aaPredicted RBP26.72■■□□□ 1.87
C1RL-207ENST00000539927 PLEKHG2Q9H7P9 1386 aa26.71■■□□□ 1.87
C1RL-207ENST00000539927 CLSPNQ9HAW4 1339 aa26.71■■□□□ 1.87
C1RL-207ENST00000539927 PXDNLA1KZ92 1463 aa26.71■■□□□ 1.87
C1RL-207ENST00000539927 ARFGEF1Q9Y6D6 1849 aa26.71■■□□□ 1.87
C1RL-207ENST00000539927 ARHGEF1Q92888 912 aaKnown RBP26.7■■□□□ 1.86
C1RL-207ENST00000539927 TJP1Q07157 1748 aa26.69■■□□□ 1.86
C1RL-207ENST00000539927 MORC1Q86VD1 984 aa26.69■■□□□ 1.86
C1RL-207ENST00000539927 AEBP1Q8IUX7 1158 aa26.69■■□□□ 1.86
C1RL-207ENST00000539927 NLGN1Q8N2Q7 840 aa26.69■■□□□ 1.86
C1RL-207ENST00000539927 A0A0G2JLW4 131 aa26.68■■□□□ 1.86
C1RL-207ENST00000539927 RFC4P35249 363 aa26.68■■□□□ 1.86
C1RL-207ENST00000539927 MTHFSP49914 203 aa26.68■■□□□ 1.86
C1RL-207ENST00000539927 AMOTQ4VCS5 1084 aa26.68■■□□□ 1.86
C1RL-207ENST00000539927 C1orf141Q5JVX7 400 aa26.68■■□□□ 1.86
C1RL-207ENST00000539927 RC3H1Q5TC82 1133 aaKnown RBP26.68■■□□□ 1.86
C1RL-207ENST00000539927 BCS1LQ9Y276 419 aa26.68■■□□□ 1.86
C1RL-207ENST00000539927 CNTNAP4Q9C0A0 1308 aa26.67■■□□□ 1.86
C1RL-207ENST00000539927 PTCD1O75127 700 aaKnown RBP26.67■■□□□ 1.86
C1RL-207ENST00000539927 RPS6KA4O75676 772 aa26.65■■□□□ 1.86
C1RL-207ENST00000539927 GYS1P13807 737 aa26.65■■□□□ 1.86
C1RL-207ENST00000539927 ADRA2BP18089 450 aa26.65■■□□□ 1.86
C1RL-207ENST00000539927 TGFB2P61812 414 aa26.65■■□□□ 1.86
C1RL-207ENST00000539927 CCDC87Q9NVE4 849 aa26.65■■□□□ 1.86
C1RL-207ENST00000539927 C10orf71Q711Q0 1435 aa26.65■■□□□ 1.86
C1RL-207ENST00000539927 SULT6B1Q6IMI4 303 aa26.64■■□□□ 1.86
C1RL-207ENST00000539927 NFATC2IPQ8NCF5 419 aa26.64■■□□□ 1.86
C1RL-207ENST00000539927 PARP3Q9Y6F1 533 aa26.64■■□□□ 1.86
C1RL-207ENST00000539927 HSPA6P17066 643 aa26.63■■□□□ 1.85
C1RL-207ENST00000539927 SBF1O95248 1867 aa26.63■■□□□ 1.85
C1RL-207ENST00000539927 AFDNP55196 1824 aaKnown RBP26.61■■□□□ 1.85
C1RL-207ENST00000539927 DPEP1P16444 411 aa26.61■■□□□ 1.85
C1RL-207ENST00000539927 ARHGAP27Q6ZUM4 889 aa26.61■■□□□ 1.85
C1RL-207ENST00000539927 CCDC88AQ3V6T2 1871 aa26.6■■□□□ 1.85
C1RL-207ENST00000539927 KIF3CO14782 793 aa26.6■■□□□ 1.85
C1RL-207ENST00000539927 FCHSD2O94868 740 aa26.6■■□□□ 1.85
C1RL-207ENST00000539927 CRKLP46109 303 aaKnown RBP26.6■■□□□ 1.85
C1RL-207ENST00000539927 KNSTRNQ9Y448 316 aa26.6■■□□□ 1.85
C1RL-207ENST00000539927 SRP68Q9UHB9 627 aaKnown RBP26.59■■□□□ 1.85
C1RL-207ENST00000539927 ADAMTS7Q9UKP4 1686 aa26.57■■□□□ 1.84
C1RL-207ENST00000539927 IL13P35225 146 aa26.55■■□□□ 1.84
C1RL-207ENST00000539927 FKBP8Q14318 412 aa26.54■■□□□ 1.84
C1RL-207ENST00000539927 USP42Q9H9J4 1324 aaKnown RBP26.53■■□□□ 1.84
C1RL-207ENST00000539927 CCER1Q8TC90 406 aaPredicted RBP26.52■■□□□ 1.84
C1RL-207ENST00000539927 KCNA3P22001 575 aa26.51■■□□□ 1.83
C1RL-207ENST00000539927 AKAP4Q5JQC9 854 aa26.51■■□□□ 1.83
C1RL-207ENST00000539927 IFFO2Q5TF58 517 aa26.51■■□□□ 1.83
C1RL-207ENST00000539927 PIM2Q9P1W9 311 aa26.51■■□□□ 1.83
C1RL-207ENST00000539927 DDR1Q08345 913 aa26.5■■□□□ 1.83
C1RL-207ENST00000539927 INTS5Q6P9B9 1019 aaKnown RBP26.5■■□□□ 1.83
C1RL-207ENST00000539927 DNAJC10Q8IXB1 793 aa26.5■■□□□ 1.83
C1RL-207ENST00000539927 LGR6Q9HBX8 967 aa26.5■■□□□ 1.83
C1RL-207ENST00000539927 HMOX1P09601 288 aa26.49■■□□□ 1.83
C1RL-207ENST00000539927 NMRK2Q9NPI5 230 aa26.49■■□□□ 1.83
C1RL-207ENST00000539927 SLC39A6Q13433 755 aa26.48■■□□□ 1.83
C1RL-207ENST00000539927 C9orf131Q5VYM1 1079 aa26.48■■□□□ 1.83
C1RL-207ENST00000539927 SLC52A2Q9HAB3 445 aa26.48■■□□□ 1.83
C1RL-207ENST00000539927 ZPR1O75312 459 aa26.47■■□□□ 1.83
C1RL-207ENST00000539927 CHRNA5P30532 468 aa26.47■■□□□ 1.83
C1RL-207ENST00000539927 UBR2Q8IWV8 1755 aa26.47■■□□□ 1.83
C1RL-207ENST00000539927 DLEC1Q9Y238 1755 aa26.47■■□□□ 1.83
C1RL-207ENST00000539927 WDR90Q96KV7 1748 aa26.46■■□□□ 1.83
C1RL-207ENST00000539927 TOMM70O94826 608 aa26.46■■□□□ 1.83
C1RL-207ENST00000539927 DALRD3Q5D0E6 543 aaKnown RBP26.46■■□□□ 1.83
C1RL-207ENST00000539927 AMER1Q5JTC6 1135 aaPredicted RBP26.46■■□□□ 1.83
C1RL-207ENST00000539927 USPL1Q5W0Q7 1092 aa26.46■■□□□ 1.83
C1RL-207ENST00000539927 RNMTO43148 476 aaKnown RBP26.45■■□□□ 1.82
C1RL-207ENST00000539927 MRC1P22897 1456 aa26.44■■□□□ 1.82
C1RL-207ENST00000539927 POLRMTO00411 1230 aaKnown RBP26.44■■□□□ 1.82
C1RL-207ENST00000539927 NRXN2Q9P2S2 1712 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms