RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 HDGFL1Q5TGJ6 251 aa21.9■■□□□ 1.1
SNX17-210ENST00000537606 BABAM1Q9NWV8 329 aa21.9■■□□□ 1.1
SNX17-210ENST00000537606 RNMTO43148 476 aaKnown RBP21.89■■□□□ 1.09
SNX17-210ENST00000537606 CSB-PGBD3P0DP91 1061 aa21.89■■□□□ 1.09
SNX17-210ENST00000537606 EIF4A1P60842 406 aaKnown RBP21.89■■□□□ 1.09
SNX17-210ENST00000537606 DAXXQ9UER7 740 aaPredicted RBP21.88■■□□□ 1.09
SNX17-210ENST00000537606 STRCQ7RTU9 1775 aa21.88■■□□□ 1.09
SNX17-210ENST00000537606 SPATA31A3Q5VYP0 1347 aa21.88■■□□□ 1.09
SNX17-210ENST00000537606 PHAXQ9H814 394 aaKnown RBP21.88■■□□□ 1.09
SNX17-210ENST00000537606 VIRMAQ69YN4 1812 aaKnown RBP21.87■■□□□ 1.09
SNX17-210ENST00000537606 XIRP1Q702N8 1843 aaKnown RBP21.87■■□□□ 1.09
SNX17-210ENST00000537606 TNS3Q68CZ2 1445 aa21.87■■□□□ 1.09
SNX17-210ENST00000537606 CEP85Q6P2H3 762 aa21.87■■□□□ 1.09
SNX17-210ENST00000537606 NCAPD2Q15021 1401 aa21.87■■□□□ 1.09
SNX17-210ENST00000537606 CCT4P50991 539 aaKnown RBP21.85■■□□□ 1.09
SNX17-210ENST00000537606 ANKRD44Q8N8A2 993 aa21.85■■□□□ 1.09
SNX17-210ENST00000537606 RAPGEF4Q8WZA2 1011 aa21.85■■□□□ 1.09
SNX17-210ENST00000537606 SLAIN2Q9P270 581 aa21.85■■□□□ 1.09
SNX17-210ENST00000537606 ATP10DQ9P241 1426 aa21.84■■□□□ 1.09
SNX17-210ENST00000537606 APBB1O00213 710 aa21.84■■□□□ 1.09
SNX17-210ENST00000537606 ANXA1P04083 346 aa21.84■■□□□ 1.09
SNX17-210ENST00000537606 DCTPP1Q9H773 170 aa21.83■■□□□ 1.09
SNX17-210ENST00000537606 RPAP2Q8IXW5 612 aaPredicted RBP21.82■■□□□ 1.08
SNX17-210ENST00000537606 CHPF2Q9P2E5 772 aa21.82■■□□□ 1.08
SNX17-210ENST00000537606 LMO7Q8WWI1 1683 aa21.82■■□□□ 1.08
SNX17-210ENST00000537606 RTL5Q5HYW3 569 aaPredicted RBP21.82■■□□□ 1.08
SNX17-210ENST00000537606 FAM208AQ9UK61 1670 aaKnown RBP21.82■■□□□ 1.08
SNX17-210ENST00000537606 PRAMEF22A3QJZ6 481 aa21.81■■□□□ 1.08
SNX17-210ENST00000537606 SOS1Q07889 1333 aaPredicted RBP21.81■■□□□ 1.08
SNX17-210ENST00000537606 C16orf71Q8IYS4 520 aaPredicted RBP21.8■■□□□ 1.08
SNX17-210ENST00000537606 TATP17735 454 aaPredicted RBP21.8■■□□□ 1.08
SNX17-210ENST00000537606 MFAP1P55081 439 aaKnown RBP21.8■■□□□ 1.08
SNX17-210ENST00000537606 UPF2Q9HAU5 1272 aaKnown RBP21.8■■□□□ 1.08
SNX17-210ENST00000537606 SMARCA5O60264 1052 aaPredicted RBP21.79■■□□□ 1.08
SNX17-210ENST00000537606 CAMTA1Q9Y6Y1 1673 aa21.78■■□□□ 1.08
SNX17-210ENST00000537606 TBC1D32Q96NH3 1257 aa21.78■■□□□ 1.08
SNX17-210ENST00000537606 COL18A1P39060 1754 aa21.77■■□□□ 1.08
SNX17-210ENST00000537606 MEGF6O75095 1541 aa21.77■■□□□ 1.08
SNX17-210ENST00000537606 SLC39A6Q13433 755 aa21.77■■□□□ 1.08
SNX17-210ENST00000537606 GNAI2P04899 355 aa21.77■■□□□ 1.08
SNX17-210ENST00000537606 DEKP35659 375 aaKnown RBP21.77■■□□□ 1.08
SNX17-210ENST00000537606 KDM3BQ7LBC6 1761 aa21.77■■□□□ 1.07
SNX17-210ENST00000537606 PHKG2P15735 406 aa21.76■■□□□ 1.07
SNX17-210ENST00000537606 OTUD7AQ8TE49 926 aaPredicted RBP21.76■■□□□ 1.07
SNX17-210ENST00000537606 PRDM11Q9NQV5 511 aa21.76■■□□□ 1.07
SNX17-210ENST00000537606 GIGYF1O75420 1035 aaPredicted RBP21.75■■□□□ 1.07
SNX17-210ENST00000537606 NFATC2IPQ8NCF5 419 aa21.75■■□□□ 1.07
SNX17-210ENST00000537606 SPG7Q9UQ90 795 aa21.75■■□□□ 1.07
SNX17-210ENST00000537606 HOXB7P09629 217 aa21.75■■□□□ 1.07
SNX17-210ENST00000537606 PI4KAP2A4QPH2 592 aa21.74■■□□□ 1.07
SNX17-210ENST00000537606 PROSER3Q2NL68 480 aa21.74■■□□□ 1.07
SNX17-210ENST00000537606 BMP2KLQ5H9B9 411 aa21.74■■□□□ 1.07
SNX17-210ENST00000537606 PLEKHM2Q8IWE5 1019 aa21.74■■□□□ 1.07
SNX17-210ENST00000537606 PI4KAP1Q8N8J0 262 aa21.74■■□□□ 1.07
SNX17-210ENST00000537606 SOS2Q07890 1332 aaPredicted RBP21.74■■□□□ 1.07
SNX17-210ENST00000537606 USP44Q9H0E7 712 aa21.74■■□□□ 1.07
SNX17-210ENST00000537606 CACNA1FO60840 1977 aa21.73■■□□□ 1.07
SNX17-210ENST00000537606 LRRFIP2Q9Y608 721 aaKnown RBP21.73■■□□□ 1.07
SNX17-210ENST00000537606 PNMA6EA0A0J9YXQ4 647 aa21.72■■□□□ 1.07
SNX17-210ENST00000537606 CYP27B1O15528 508 aa21.72■■□□□ 1.07
SNX17-210ENST00000537606 GNAI3P08754 354 aa21.72■■□□□ 1.07
SNX17-210ENST00000537606 HMMRO75330 724 aa21.72■■□□□ 1.07
SNX17-210ENST00000537606 IFNL2Q8IZJ0 200 aa21.72■■□□□ 1.07
SNX17-210ENST00000537606 EXOC6BQ9Y2D4 811 aa21.72■■□□□ 1.07
SNX17-210ENST00000537606 KDM6AO15550 1401 aaPredicted RBP21.72■■□□□ 1.07
SNX17-210ENST00000537606 CPDO75976 1380 aa21.71■■□□□ 1.07
SNX17-210ENST00000537606 SLC52A2Q9HAB3 445 aa21.71■■□□□ 1.07
SNX17-210ENST00000537606 DBF4Q9UBU7 674 aaPredicted RBP21.71■■□□□ 1.07
SNX17-210ENST00000537606 CRYBG1Q9Y4K1 1723 aa21.7■■□□□ 1.07
SNX17-210ENST00000537606 GSPT1P15170 499 aaKnown RBP21.7■■□□□ 1.06
SNX17-210ENST00000537606 C22orf23Q9BZE7 217 aa21.7■■□□□ 1.06
SNX17-210ENST00000537606 SRCIN1Q9C0H9 1055 aa21.7■■□□□ 1.06
SNX17-210ENST00000537606 NFKBIBQ15653 356 aa21.7■■□□□ 1.06
SNX17-210ENST00000537606 ZNF790Q6PG37 636 aa21.7■■□□□ 1.06
SNX17-210ENST00000537606 TOM1L2Q6ZVM7 507 aa21.7■■□□□ 1.06
SNX17-210ENST00000537606 DNAAF4Q8WXU2 420 aa21.7■■□□□ 1.06
SNX17-210ENST00000537606 OVOS2A0A0G2JMS6 1433 aa21.7■■□□□ 1.06
SNX17-210ENST00000537606 UBTFL1P0CB47 393 aaPredicted RBP21.69■■□□□ 1.06
SNX17-210ENST00000537606 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.68■■□□□ 1.065e-9■□□□□ 8.6
SNX17-210ENST00000537606 HEG1Q9ULI3 1381 aa21.68■■□□□ 1.06
SNX17-210ENST00000537606 NBPF7P0C2Y1 421 aaPredicted RBP21.67■■□□□ 1.06
SNX17-210ENST00000537606 ATP8B2P98198 1209 aa21.67■■□□□ 1.06
SNX17-210ENST00000537606 BEND3Q5T5X7 828 aa21.67■■□□□ 1.06
SNX17-210ENST00000537606 STRN4Q9NRL3 753 aa21.67■■□□□ 1.06
SNX17-210ENST00000537606 AIMP1Q12904 312 aaKnown RBP21.67■■□□□ 1.06
SNX17-210ENST00000537606 BECN1Q14457 450 aa21.67■■□□□ 1.06
SNX17-210ENST00000537606 TBC1D9Q6ZT07 1266 aa21.67■■□□□ 1.06
SNX17-210ENST00000537606 CHMP4AQ9BY43 222 aa21.67■■□□□ 1.06
SNX17-210ENST00000537606 SLKQ9H2G2 1235 aaPredicted RBP21.67■■□□□ 1.06
SNX17-210ENST00000537606 TBC1D2Q9BYX2 928 aa21.66■■□□□ 1.06
SNX17-210ENST00000537606 ADCY9O60503 1353 aa21.66■■□□□ 1.06
SNX17-210ENST00000537606 MAP3K2Q9Y2U5 619 aa21.66■■□□□ 1.06
SNX17-210ENST00000537606 WDR17Q8IZU2 1322 aa21.65■■□□□ 1.06
SNX17-210ENST00000537606 SIPA1L3O60292 1781 aaPredicted RBP21.65■■□□□ 1.06
SNX17-210ENST00000537606 TTC22Q5TAA0 569 aa21.65■■□□□ 1.06
SNX17-210ENST00000537606 ZNF496Q96IT1 587 aaPredicted RBP21.65■■□□□ 1.06
SNX17-210ENST00000537606 DCAF5Q96JK2 942 aa21.65■■□□□ 1.06
SNX17-210ENST00000537606 PXDNLA1KZ92 1463 aa21.64■■□□□ 1.06
SNX17-210ENST00000537606 MYL6BP14649 208 aa21.64■■□□□ 1.05
SNX17-210ENST00000537606 USP35Q9P2H5 1018 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms