RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 LINC00116Q8NCU8 138 aa17.88■□□□□ 0.45
MRPS35-202ENST00000536569 UBR3Q6ZT12 1888 aa17.88■□□□□ 0.45
MRPS35-202ENST00000536569 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.87■□□□□ 0.45
MRPS35-202ENST00000536569 CABP4P57796 275 aa17.87■□□□□ 0.45
MRPS35-202ENST00000536569 GPR162Q16538 588 aa17.87■□□□□ 0.45
MRPS35-202ENST00000536569 CD2APQ9Y5K6 639 aa17.87■□□□□ 0.45
MRPS35-202ENST00000536569 KDM6AO15550 1401 aaPredicted RBP17.87■□□□□ 0.45
MRPS35-202ENST00000536569 ITPK1Q13572 414 aa17.86■□□□□ 0.45
MRPS35-202ENST00000536569 KLHL34Q8N239 644 aa17.86■□□□□ 0.45
MRPS35-202ENST00000536569 AKAP4Q5JQC9 854 aa17.85■□□□□ 0.45
MRPS35-202ENST00000536569 RC3H1Q5TC82 1133 aaKnown RBP17.85■□□□□ 0.45
MRPS35-202ENST00000536569 MSL1Q68DK7 614 aa17.85■□□□□ 0.45
MRPS35-202ENST00000536569 GNPATO15228 680 aa17.84■□□□□ 0.45
MRPS35-202ENST00000536569 DIAPH1O60610 1272 aaKnown RBP17.84■□□□□ 0.45
MRPS35-202ENST00000536569 CC2D1BQ5T0F9 858 aaKnown RBP17.84■□□□□ 0.45
MRPS35-202ENST00000536569 AMIGO3Q86WK7 504 aa17.84■□□□□ 0.45
MRPS35-202ENST00000536569 CHD4Q14839 1912 aa17.83■□□□□ 0.44
MRPS35-202ENST00000536569 PHF14O94880 888 aa17.83■□□□□ 0.44
MRPS35-202ENST00000536569 ADRA2BP18089 450 aa17.83■□□□□ 0.44
MRPS35-202ENST00000536569 NLGN2Q8NFZ4 835 aa17.83■□□□□ 0.44
MRPS35-202ENST00000536569 CNTNAP4Q9C0A0 1308 aa17.82■□□□□ 0.44
MRPS35-202ENST00000536569 GRIN3BO60391 1043 aa17.82■□□□□ 0.44
MRPS35-202ENST00000536569 RBM42Q9BTD8 480 aaKnown RBP17.82■□□□□ 0.44
MRPS35-202ENST00000536569 RTCBQ9Y3I0 505 aaKnown RBP17.82■□□□□ 0.44
MRPS35-202ENST00000536569 NFATC2IPQ8NCF5 419 aa17.81■□□□□ 0.44
MRPS35-202ENST00000536569 SLC4A9Q96Q91 983 aa17.81■□□□□ 0.44
MRPS35-202ENST00000536569 UTRNP46939 3433 aa17.81■□□□□ 0.44
MRPS35-202ENST00000536569 TRAPPC3LQ5T215 181 aa17.8■□□□□ 0.44
MRPS35-202ENST00000536569 SCN11AQ9UI33 1791 aa17.79■□□□□ 0.44
MRPS35-202ENST00000536569 RPS6KA4O75676 772 aa17.79■□□□□ 0.44
MRPS35-202ENST00000536569 ZNF784Q8NCA9 323 aaPredicted RBP17.79■□□□□ 0.44
MRPS35-202ENST00000536569 COL5A3P25940 1745 aaPredicted RBP17.78■□□□□ 0.44
MRPS35-202ENST00000536569 HMOX1P09601 288 aa17.78■□□□□ 0.44
MRPS35-202ENST00000536569 NLGN1Q8N2Q7 840 aa17.78■□□□□ 0.44
MRPS35-202ENST00000536569 SLC52A2Q9HAB3 445 aa17.78■□□□□ 0.44
MRPS35-202ENST00000536569 CICQ96RK0 1608 aaPredicted RBP17.78■□□□□ 0.44
MRPS35-202ENST00000536569 PELP1Q8IZL8 1130 aaKnown RBP17.77■□□□□ 0.44
MRPS35-202ENST00000536569 COL3A1P02461 1466 aaPredicted RBP17.76■□□□□ 0.43
MRPS35-202ENST00000536569 MRC1P22897 1456 aa17.76■□□□□ 0.43
MRPS35-202ENST00000536569 RNMTO43148 476 aaKnown RBP17.76■□□□□ 0.43
MRPS35-202ENST00000536569 PTCD1O75127 700 aaKnown RBP17.76■□□□□ 0.43
MRPS35-202ENST00000536569 SMIM5Q71RC9 77 aa17.76■□□□□ 0.43
MRPS35-202ENST00000536569 RFC4P35249 363 aa17.75■□□□□ 0.43
MRPS35-202ENST00000536569 MTHFSDQ2M296 383 aaKnown RBP17.75■□□□□ 0.43
MRPS35-202ENST00000536569 ARHGEF1Q92888 912 aaKnown RBP17.75■□□□□ 0.43
MRPS35-202ENST00000536569 ADAMTS7Q9UKP4 1686 aa17.74■□□□□ 0.43
MRPS35-202ENST00000536569 YBX3P16989 372 aaKnown RBP eCLIP17.74■□□□□ 0.431e-6■□□□□ 10.1
MRPS35-202ENST00000536569 CFAP53Q96M91 514 aa17.74■□□□□ 0.43
MRPS35-202ENST00000536569 LGR6Q9HBX8 967 aa17.74■□□□□ 0.43
MRPS35-202ENST00000536569 MMP10P09238 476 aa17.73■□□□□ 0.43
MRPS35-202ENST00000536569 CRKLP46109 303 aaKnown RBP17.73■□□□□ 0.43
MRPS35-202ENST00000536569 VSIG10Q8N0Z9 540 aa17.72■□□□□ 0.43
MRPS35-202ENST00000536569 GAS2L2Q8NHY3 880 aa17.72■□□□□ 0.43
MRPS35-202ENST00000536569 U2SURPO15042 1029 aaKnown RBP17.71■□□□□ 0.43
MRPS35-202ENST00000536569 GYS1P13807 737 aa17.71■□□□□ 0.43
MRPS35-202ENST00000536569 GOLGB1Q14789 3259 aaKnown RBP17.71■□□□□ 0.43
MRPS35-202ENST00000536569 MYH14Q7Z406 1995 aaKnown RBP17.71■□□□□ 0.43
MRPS35-202ENST00000536569 TJP1Q07157 1748 aa17.7■□□□□ 0.42
MRPS35-202ENST00000536569 TGFB2P61812 414 aa17.7■□□□□ 0.42
MRPS35-202ENST00000536569 NUDCQ9Y266 331 aa17.7■□□□□ 0.42
MRPS35-202ENST00000536569 GNAT3A8MTJ3 354 aa17.69■□□□□ 0.42
MRPS35-202ENST00000536569 KIF13BQ9NQT8 1826 aa17.68■□□□□ 0.42
MRPS35-202ENST00000536569 INTS5Q6P9B9 1019 aaKnown RBP17.68■□□□□ 0.42
MRPS35-202ENST00000536569 CCDC87Q9NVE4 849 aa17.68■□□□□ 0.42
MRPS35-202ENST00000536569 PARP3Q9Y6F1 533 aa17.68■□□□□ 0.42
MRPS35-202ENST00000536569 USP42Q9H9J4 1324 aaKnown RBP17.68■□□□□ 0.42
MRPS35-202ENST00000536569 KCPQ6ZWJ8 1503 aa17.67■□□□□ 0.42
MRPS35-202ENST00000536569 C4AP0C0L4 1744 aa17.67■□□□□ 0.42
MRPS35-202ENST00000536569 C10orf71Q711Q0 1435 aa17.67■□□□□ 0.42
MRPS35-202ENST00000536569 CYP19A1P11511 503 aaPredicted RBP17.67■□□□□ 0.42
MRPS35-202ENST00000536569 SLC39A6Q13433 755 aa17.67■□□□□ 0.42
MRPS35-202ENST00000536569 CNGB1Q14028 1251 aaPredicted RBP17.67■□□□□ 0.42
MRPS35-202ENST00000536569 DNAJC10Q8IXB1 793 aa17.67■□□□□ 0.42
MRPS35-202ENST00000536569 VIRMAQ69YN4 1812 aaKnown RBP17.67■□□□□ 0.42
MRPS35-202ENST00000536569 PPP2R1AP30153 589 aa17.66■□□□□ 0.42
MRPS35-202ENST00000536569 TTC5Q8N0Z6 440 aa17.66■□□□□ 0.42
MRPS35-202ENST00000536569 TEFQ10587 303 aa17.65■□□□□ 0.42
MRPS35-202ENST00000536569 RSPH6AQ9H0K4 717 aa17.65■□□□□ 0.42
MRPS35-202ENST00000536569 SOS1Q07889 1333 aaPredicted RBP17.65■□□□□ 0.42
MRPS35-202ENST00000536569 CEMIPQ8WUJ3 1361 aa17.65■□□□□ 0.42
MRPS35-202ENST00000536569 PXDNLA1KZ92 1463 aa17.64■□□□□ 0.41
MRPS35-202ENST00000536569 ZPR1O75312 459 aa17.64■□□□□ 0.41
MRPS35-202ENST00000536569 FCHSD2O94868 740 aa17.64■□□□□ 0.41
MRPS35-202ENST00000536569 IL17REQ8NFR9 667 aa17.64■□□□□ 0.41
MRPS35-202ENST00000536569 TEX13AQ9BXU3 409 aaPredicted RBP17.64■□□□□ 0.41
MRPS35-202ENST00000536569 UBR2Q8IWV8 1755 aa17.63■□□□□ 0.41
MRPS35-202ENST00000536569 STARD3NLO95772 234 aa17.63■□□□□ 0.41
MRPS35-202ENST00000536569 PRKAR2BP31323 418 aa17.63■□□□□ 0.41
MRPS35-202ENST00000536569 FKBP8Q14318 412 aa17.63■□□□□ 0.41
MRPS35-202ENST00000536569 ZNF790Q6PG37 636 aa17.63■□□□□ 0.41
MRPS35-202ENST00000536569 SRP68Q9UHB9 627 aaKnown RBP17.62■□□□□ 0.41
MRPS35-202ENST00000536569 NARFQ9UHQ1 456 aa17.62■□□□□ 0.41
MRPS35-202ENST00000536569 U2AF1L5P0DN76 240 aaPredicted RBP17.61■□□□□ 0.41
MRPS35-202ENST00000536569 TM4SF1P30408 202 aa17.61■□□□□ 0.41
MRPS35-202ENST00000536569 U2AF1Q01081 240 aaKnown RBP eCLIP17.61■□□□□ 0.41
MRPS35-202ENST00000536569 PHACTR3Q96KR7 559 aa17.61■□□□□ 0.41
MRPS35-202ENST00000536569 COL15A1P39059 1388 aa17.61■□□□□ 0.41
MRPS35-202ENST00000536569 KIAA1551Q9HCM1 1747 aa17.61■□□□□ 0.41
MRPS35-202ENST00000536569 GIGYF1O75420 1035 aaPredicted RBP17.6■□□□□ 0.41
MRPS35-202ENST00000536569 C1QTNF8P60827 252 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms