RNA–Protein interactions for RNA: ENST00000536144.1

MRE11-206, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 3

Gene MRE11, Length 619 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-206ENST00000536144 TCP11L2Q8N4U5 519 aa12.27□□□□□ -0.45
MRE11-206ENST00000536144 DDX27Q96GQ7 796 aaKnown RBP12.27□□□□□ -0.45
MRE11-206ENST00000536144 ERBB3P21860 1342 aa12.27□□□□□ -0.45
MRE11-206ENST00000536144 COL18A1P39060 1754 aa12.27□□□□□ -0.45
MRE11-206ENST00000536144 RTL1A6NKG5 1358 aa12.27□□□□□ -0.45
MRE11-206ENST00000536144 CRB1P82279 1406 aa12.27□□□□□ -0.45
MRE11-206ENST00000536144 TOM1L2Q6ZVM7 507 aa12.26□□□□□ -0.45
MRE11-206ENST00000536144 CARD10Q9BWT7 1032 aa12.26□□□□□ -0.45
MRE11-206ENST00000536144 TSHZ2Q9NRE2 1034 aa12.26□□□□□ -0.45
MRE11-206ENST00000536144 POLKQ9UBT6 870 aa12.26□□□□□ -0.45
MRE11-206ENST00000536144 GLI3P10071 1580 aa12.26□□□□□ -0.45
MRE11-206ENST00000536144 CSB-PGBD3P0DP91 1061 aa12.25□□□□□ -0.45
MRE11-206ENST00000536144 FAM98CQ17RN3 349 aaKnown RBP12.25□□□□□ -0.45
MRE11-206ENST00000536144 SEPT12Q8IYM1 358 aa12.25□□□□□ -0.45
MRE11-206ENST00000536144 ANKRD24Q8TF21 1146 aa12.25□□□□□ -0.45
MRE11-206ENST00000536144 MARVELD3Q96A59 401 aa12.25□□□□□ -0.45
MRE11-206ENST00000536144 FLT4P35916 1363 aa12.25□□□□□ -0.45
MRE11-206ENST00000536144 RGS12O14924 1447 aa12.25□□□□□ -0.45
MRE11-206ENST00000536144 KIF20BQ96Q89 1820 aa12.25□□□□□ -0.45
MRE11-206ENST00000536144 INSRP06213 1382 aa12.24□□□□□ -0.45
MRE11-206ENST00000536144 USP35Q9P2H5 1018 aa12.24□□□□□ -0.45
MRE11-206ENST00000536144 EMILIN1Q9Y6C2 1016 aa12.24□□□□□ -0.45
MRE11-206ENST00000536144 POTEMA6NI47 508 aa12.23□□□□□ -0.45
MRE11-206ENST00000536144 TNNT2P45379 298 aaPredicted RBP12.23□□□□□ -0.45
MRE11-206ENST00000536144 HSP90AB2PQ58FF8 381 aa12.23□□□□□ -0.45
MRE11-206ENST00000536144 ARSIQ5FYB1 569 aa12.23□□□□□ -0.45
MRE11-206ENST00000536144 CC2D1BQ5T0F9 858 aaKnown RBP12.23□□□□□ -0.45
MRE11-206ENST00000536144 POTEGQ6S5H5 508 aa12.23□□□□□ -0.45
MRE11-206ENST00000536144 CDCA7Q9BWT1 371 aaPredicted RBP12.23□□□□□ -0.45
MRE11-206ENST00000536144 ZSWIM6Q9HCJ5 1215 aa12.23□□□□□ -0.45
MRE11-206ENST00000536144 SOCS7O14512 581 aa12.22□□□□□ -0.45
MRE11-206ENST00000536144 NLRP2Q9NX02 1062 aa12.22□□□□□ -0.45
MRE11-206ENST00000536144 PPM1GO15355 546 aaPredicted RBP12.21□□□□□ -0.45
MRE11-206ENST00000536144 HOXB1P14653 301 aaPredicted RBP12.21□□□□□ -0.45
MRE11-206ENST00000536144 EMP3P54852 163 aa12.21□□□□□ -0.45
MRE11-206ENST00000536144 DDX10Q13206 875 aaKnown RBP12.21□□□□□ -0.45
MRE11-206ENST00000536144 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
MRE11-206ENST00000536144 SLC34A2O95436 690 aa12.2□□□□□ -0.46
MRE11-206ENST00000536144 KRT27Q7Z3Y8 459 aa12.2□□□□□ -0.46
MRE11-206ENST00000536144 LTV1Q96GA3 475 aaPredicted RBP12.2□□□□□ -0.46
MRE11-206ENST00000536144 WDR70Q9NW82 654 aa12.2□□□□□ -0.46
MRE11-206ENST00000536144 LTN1O94822 1766 aa12.2□□□□□ -0.46
MRE11-206ENST00000536144 A0A0G2JS52 829 aa12.19□□□□□ -0.46
MRE11-206ENST00000536144 ZNF316A6NFI3 1004 aaPredicted RBP12.19□□□□□ -0.46
MRE11-206ENST00000536144 MYT1Q01538 1121 aa12.19□□□□□ -0.46
MRE11-206ENST00000536144 MFSD10Q14728 455 aa12.19□□□□□ -0.46
MRE11-206ENST00000536144 GPR153Q6NV75 609 aa12.19□□□□□ -0.46
MRE11-206ENST00000536144 KHSRPQ92945 711 aaKnown RBP eCLIP12.19□□□□□ -0.46
MRE11-206ENST00000536144 PCDHGA4Q9Y5G9 962 aa12.19□□□□□ -0.46
MRE11-206ENST00000536144 ANKRD26Q9UPS8 1709 aa12.19□□□□□ -0.46
MRE11-206ENST00000536144 TBC1D12O60347 775 aa12.18□□□□□ -0.46
MRE11-206ENST00000536144 MTHFSP49914 203 aa12.18□□□□□ -0.46
MRE11-206ENST00000536144 NBPF6Q5VWK0 638 aa12.18□□□□□ -0.46
MRE11-206ENST00000536144 UPF1Q92900 1129 aaKnown RBP eCLIP12.18□□□□□ -0.46
MRE11-206ENST00000536144 NBPF4Q96M43 638 aa12.18□□□□□ -0.46
MRE11-206ENST00000536144 DISP2A7MBM2 1401 aa12.18□□□□□ -0.46
MRE11-206ENST00000536144 THSD7AQ9UPZ6 1657 aa12.17□□□□□ -0.46
MRE11-206ENST00000536144 IL2RBP14784 551 aa12.17□□□□□ -0.46
MRE11-206ENST00000536144 PDE3BQ13370 1112 aa12.17□□□□□ -0.46
MRE11-206ENST00000536144 DDB1Q16531 1140 aa12.17□□□□□ -0.46
MRE11-206ENST00000536144 PEAK1Q9H792 1746 aa12.17□□□□□ -0.46
MRE11-206ENST00000536144 EXOC5O00471 708 aa12.16□□□□□ -0.46
MRE11-206ENST00000536144 EIF4A2Q14240 407 aaKnown RBP12.16□□□□□ -0.46
MRE11-206ENST00000536144 RGPD5Q99666 1765 aa12.15□□□□□ -0.46
MRE11-206ENST00000536144 FAM205CA6NFA0 338 aa12.15□□□□□ -0.46
MRE11-206ENST00000536144 CCDC125Q86Z20 511 aa12.15□□□□□ -0.46
MRE11-206ENST00000536144 PTCD2Q8WV60 388 aaKnown RBP12.15□□□□□ -0.46
MRE11-206ENST00000536144 EYA1Q99502 592 aa12.15□□□□□ -0.46
MRE11-206ENST00000536144 NUDT7P0C024 238 aa12.14□□□□□ -0.47
MRE11-206ENST00000536144 PPP2R1AP30153 589 aa12.14□□□□□ -0.47
MRE11-206ENST00000536144 IL13P35225 146 aa12.14□□□□□ -0.47
MRE11-206ENST00000536144 CNGB1Q14028 1251 aaPredicted RBP12.14□□□□□ -0.47
MRE11-206ENST00000536144 FAM196AQ6ZSG2 479 aa12.14□□□□□ -0.47
MRE11-206ENST00000536144 FAM208AQ9UK61 1670 aaKnown RBP12.13□□□□□ -0.47
MRE11-206ENST00000536144 NCAPD2Q15021 1401 aa12.13□□□□□ -0.47
MRE11-206ENST00000536144 RALBP1Q15311 655 aa12.13□□□□□ -0.47
MRE11-206ENST00000536144 RAPGEF4Q8WZA2 1011 aa12.13□□□□□ -0.47
MRE11-206ENST00000536144 PARD3Q8TEW0 1356 aa12.13□□□□□ -0.47
MRE11-206ENST00000536144 MAP2P11137 1827 aaKnown RBP12.13□□□□□ -0.47
MRE11-206ENST00000536144 IGSF1Q8N6C5 1336 aa12.12□□□□□ -0.47
MRE11-206ENST00000536144 DIAPH1O60610 1272 aaKnown RBP12.12□□□□□ -0.47
MRE11-206ENST00000536144 USHBP1Q8N6Y0 703 aa12.12□□□□□ -0.47
MRE11-206ENST00000536144 MARCH10Q8NA82 808 aaPredicted RBP12.12□□□□□ -0.47
MRE11-206ENST00000536144 BCL9O00512 1426 aa12.11□□□□□ -0.47
MRE11-206ENST00000536144 PARP4Q9UKK3 1724 aaKnown RBP12.11□□□□□ -0.47
MRE11-206ENST00000536144 PLEKHG2Q9H7P9 1386 aa12.11□□□□□ -0.47
MRE11-206ENST00000536144 TATP17735 454 aaPredicted RBP12.11□□□□□ -0.47
MRE11-206ENST00000536144 ZCRB1Q8TBF4 217 aaKnown RBP12.11□□□□□ -0.47
MRE11-206ENST00000536144 CFAP53Q96M91 514 aa12.11□□□□□ -0.47
MRE11-206ENST00000536144 OVOS2A0A0G2JMS6 1433 aa12.11□□□□□ -0.47
MRE11-206ENST00000536144 TNS2Q63HR2 1409 aa12.11□□□□□ -0.47
MRE11-206ENST00000536144 MAP3K9P80192 1104 aa12.1□□□□□ -0.47
MRE11-206ENST00000536144 FAM182BQ5T319 152 aa12.1□□□□□ -0.47
MRE11-206ENST00000536144 OXER1Q8TDS5 423 aa12.1□□□□□ -0.47
MRE11-206ENST00000536144 EP400Q96L91 3159 aa12.1□□□□□ -0.47
MRE11-206ENST00000536144 MEGF6O75095 1541 aa12.09□□□□□ -0.47
MRE11-206ENST00000536144 BRWD3Q6RI45 1802 aa12.09□□□□□ -0.47
MRE11-206ENST00000536144 KDRP35968 1356 aa12.08□□□□□ -0.48
MRE11-206ENST00000536144 HS3ST6Q96QI5 342 aa12.08□□□□□ -0.48
MRE11-206ENST00000536144 SPG7Q9UQ90 795 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms