RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 DCAF5Q96JK2 942 aa11.57□□□□□ -0.56
SFSWAP-202ENST00000535202 ATG3Q9NT62 314 aa11.57□□□□□ -0.56
SFSWAP-202ENST00000535202 KDRP35968 1356 aa11.56□□□□□ -0.56
SFSWAP-202ENST00000535202 MAP3K5Q99683 1374 aa11.56□□□□□ -0.56
SFSWAP-202ENST00000535202 ERVV-2B6SEH9 535 aa11.56□□□□□ -0.56
SFSWAP-202ENST00000535202 ATP6V1AP38606 617 aa11.56□□□□□ -0.56
SFSWAP-202ENST00000535202 LINC00116Q8NCU8 138 aa11.56□□□□□ -0.56
SFSWAP-202ENST00000535202 FLAD1Q8NFF5 587 aa11.56□□□□□ -0.56
SFSWAP-202ENST00000535202 HMOX1P09601 288 aa11.55□□□□□ -0.56
SFSWAP-202ENST00000535202 CABP4P57796 275 aa11.55□□□□□ -0.56
SFSWAP-202ENST00000535202 ITPK1Q13572 414 aa11.55□□□□□ -0.56
SFSWAP-202ENST00000535202 SMIM5Q71RC9 77 aa11.55□□□□□ -0.56
SFSWAP-202ENST00000535202 AMIGO3Q86WK7 504 aa11.55□□□□□ -0.56
SFSWAP-202ENST00000535202 NPC1L1Q9UHC9 1359 aa11.54□□□□□ -0.56
SFSWAP-202ENST00000535202 SCN11AQ9UI33 1791 aa11.54□□□□□ -0.56
SFSWAP-202ENST00000535202 VIRMAQ69YN4 1812 aaKnown RBP11.54□□□□□ -0.56
SFSWAP-202ENST00000535202 GNPATO15228 680 aa11.54□□□□□ -0.56
SFSWAP-202ENST00000535202 DIAPH1O60610 1272 aaKnown RBP11.54□□□□□ -0.56
SFSWAP-202ENST00000535202 RBM42Q9BTD8 480 aaKnown RBP11.54□□□□□ -0.56
SFSWAP-202ENST00000535202 ZNF831Q5JPB2 1677 aa11.53□□□□□ -0.56
SFSWAP-202ENST00000535202 COL5A3P25940 1745 aaPredicted RBP11.53□□□□□ -0.56
SFSWAP-202ENST00000535202 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.53□□□□□ -0.56
SFSWAP-202ENST00000535202 SSFA2P28290 1259 aa11.53□□□□□ -0.56
SFSWAP-202ENST00000535202 GTF3C3Q9Y5Q9 886 aa11.53□□□□□ -0.56
SFSWAP-202ENST00000535202 COL3A1P02461 1466 aaPredicted RBP11.52□□□□□ -0.56
SFSWAP-202ENST00000535202 GPR162Q16538 588 aa11.52□□□□□ -0.57
SFSWAP-202ENST00000535202 AKAP4Q5JQC9 854 aa11.52□□□□□ -0.57
SFSWAP-202ENST00000535202 NLGN2Q8NFZ4 835 aa11.52□□□□□ -0.57
SFSWAP-202ENST00000535202 SLC4A9Q96Q91 983 aa11.52□□□□□ -0.57
SFSWAP-202ENST00000535202 CHD4Q14839 1912 aa11.52□□□□□ -0.57
SFSWAP-202ENST00000535202 U2SURPO15042 1029 aaKnown RBP11.51□□□□□ -0.57
SFSWAP-202ENST00000535202 NFATC2IPQ8NCF5 419 aa11.51□□□□□ -0.57
SFSWAP-202ENST00000535202 PTCD1O75127 700 aaKnown RBP11.5□□□□□ -0.57
SFSWAP-202ENST00000535202 TJP1Q07157 1748 aa11.49□□□□□ -0.57
SFSWAP-202ENST00000535202 MTHFSDQ2M296 383 aaKnown RBP11.49□□□□□ -0.57
SFSWAP-202ENST00000535202 LGR6Q9HBX8 967 aa11.49□□□□□ -0.57
SFSWAP-202ENST00000535202 RTCBQ9Y3I0 505 aaKnown RBP11.49□□□□□ -0.57
SFSWAP-202ENST00000535202 CNTNAP4Q9C0A0 1308 aa11.49□□□□□ -0.57
SFSWAP-202ENST00000535202 MRC1P22897 1456 aa11.49□□□□□ -0.57
SFSWAP-202ENST00000535202 MYH14Q7Z406 1995 aaKnown RBP11.48□□□□□ -0.57
SFSWAP-202ENST00000535202 RNMTO43148 476 aaKnown RBP11.48□□□□□ -0.57
SFSWAP-202ENST00000535202 TRAPPC3LQ5T215 181 aa11.48□□□□□ -0.57
SFSWAP-202ENST00000535202 SLC52A2Q9HAB3 445 aa11.48□□□□□ -0.57
SFSWAP-202ENST00000535202 C4AP0C0L4 1744 aa11.47□□□□□ -0.57
SFSWAP-202ENST00000535202 ADAMTS7Q9UKP4 1686 aa11.47□□□□□ -0.57
SFSWAP-202ENST00000535202 CICQ96RK0 1608 aaPredicted RBP11.47□□□□□ -0.57
SFSWAP-202ENST00000535202 RC3H1Q5TC82 1133 aaKnown RBP11.47□□□□□ -0.57
SFSWAP-202ENST00000535202 CFAP53Q96M91 514 aa11.47□□□□□ -0.57
SFSWAP-202ENST00000535202 CD2APQ9Y5K6 639 aa11.47□□□□□ -0.57
SFSWAP-202ENST00000535202 CRKLP46109 303 aaKnown RBP11.46□□□□□ -0.57
SFSWAP-202ENST00000535202 SLC39A6Q13433 755 aa11.46□□□□□ -0.57
SFSWAP-202ENST00000535202 ARHGEF1Q92888 912 aaKnown RBP11.46□□□□□ -0.57
SFSWAP-202ENST00000535202 RPS6KA4O75676 772 aa11.45□□□□□ -0.58
SFSWAP-202ENST00000535202 MMP10P09238 476 aa11.45□□□□□ -0.58
SFSWAP-202ENST00000535202 YBX3P16989 372 aaKnown RBP eCLIP11.45□□□□□ -0.58
SFSWAP-202ENST00000535202 ADRA2BP18089 450 aa11.45□□□□□ -0.58
SFSWAP-202ENST00000535202 PPP2R1AP30153 589 aa11.45□□□□□ -0.58
SFSWAP-202ENST00000535202 RFC4P35249 363 aa11.45□□□□□ -0.58
SFSWAP-202ENST00000535202 GAS2L2Q8NHY3 880 aa11.45□□□□□ -0.58
SFSWAP-202ENST00000535202 KCPQ6ZWJ8 1503 aa11.45□□□□□ -0.58
SFSWAP-202ENST00000535202 DNAJC10Q8IXB1 793 aa11.44□□□□□ -0.58
SFSWAP-202ENST00000535202 WWC3Q9ULE0 1092 aa11.44□□□□□ -0.58
SFSWAP-202ENST00000535202 NUDCQ9Y266 331 aa11.44□□□□□ -0.58
SFSWAP-202ENST00000535202 UBR2Q8IWV8 1755 aa11.44□□□□□ -0.58
SFSWAP-202ENST00000535202 GNAT3A8MTJ3 354 aa11.43□□□□□ -0.58
SFSWAP-202ENST00000535202 GRIN3BO60391 1043 aa11.43□□□□□ -0.58
SFSWAP-202ENST00000535202 PRKAR2BP31323 418 aa11.43□□□□□ -0.58
SFSWAP-202ENST00000535202 NLGN1Q8N2Q7 840 aa11.43□□□□□ -0.58
SFSWAP-202ENST00000535202 ZNF784Q8NCA9 323 aaPredicted RBP11.43□□□□□ -0.58
SFSWAP-202ENST00000535202 RSPH6AQ9H0K4 717 aa11.43□□□□□ -0.58
SFSWAP-202ENST00000535202 KIF13BQ9NQT8 1826 aa11.42□□□□□ -0.58
SFSWAP-202ENST00000535202 SIPA1L3O60292 1781 aaPredicted RBP11.42□□□□□ -0.58
SFSWAP-202ENST00000535202 U2AF1L5P0DN76 240 aaPredicted RBP11.42□□□□□ -0.58
SFSWAP-202ENST00000535202 GYS1P13807 737 aa11.42□□□□□ -0.58
SFSWAP-202ENST00000535202 U2AF1Q01081 240 aaKnown RBP eCLIP11.42□□□□□ -0.58
SFSWAP-202ENST00000535202 TEFQ10587 303 aa11.42□□□□□ -0.58
SFSWAP-202ENST00000535202 INTS5Q6P9B9 1019 aaKnown RBP11.42□□□□□ -0.58
SFSWAP-202ENST00000535202 TTC5Q8N0Z6 440 aa11.42□□□□□ -0.58
SFSWAP-202ENST00000535202 CCDC87Q9NVE4 849 aa11.42□□□□□ -0.58
SFSWAP-202ENST00000535202 SRP68Q9UHB9 627 aaKnown RBP11.42□□□□□ -0.58
SFSWAP-202ENST00000535202 IL17REQ8NFR9 667 aa11.41□□□□□ -0.58
SFSWAP-202ENST00000535202 PHACTR3Q96KR7 559 aa11.41□□□□□ -0.58
SFSWAP-202ENST00000535202 PARP3Q9Y6F1 533 aa11.41□□□□□ -0.58
SFSWAP-202ENST00000535202 N4BP2Q86UW6 1770 aaPredicted RBP11.41□□□□□ -0.58
SFSWAP-202ENST00000535202 USP42Q9H9J4 1324 aaKnown RBP11.4□□□□□ -0.58
SFSWAP-202ENST00000535202 CYP19A1P11511 503 aaPredicted RBP11.4□□□□□ -0.58
SFSWAP-202ENST00000535202 C10orf71Q711Q0 1435 aa11.4□□□□□ -0.58
SFSWAP-202ENST00000535202 KIAA1551Q9HCM1 1747 aa11.4□□□□□ -0.58
SFSWAP-202ENST00000535202 SOS1Q07889 1333 aaPredicted RBP11.39□□□□□ -0.59
SFSWAP-202ENST00000535202 PXDNLA1KZ92 1463 aa11.39□□□□□ -0.59
SFSWAP-202ENST00000535202 FKBP8Q14318 412 aa11.39□□□□□ -0.59
SFSWAP-202ENST00000535202 VSIG10Q8N0Z9 540 aa11.39□□□□□ -0.59
SFSWAP-202ENST00000535202 BCL11AQ9H165 835 aa11.39□□□□□ -0.59
SFSWAP-202ENST00000535202 ZBTB1Q9Y2K1 713 aa11.39□□□□□ -0.59
SFSWAP-202ENST00000535202 COL15A1P39059 1388 aa11.39□□□□□ -0.59
SFSWAP-202ENST00000535202 UTRNP46939 3433 aa11.38□□□□□ -0.59
SFSWAP-202ENST00000535202 ZPR1O75312 459 aa11.38□□□□□ -0.59
SFSWAP-202ENST00000535202 USPL1Q5W0Q7 1092 aa11.38□□□□□ -0.59
SFSWAP-202ENST00000535202 ZNF496Q96IT1 587 aaPredicted RBP11.38□□□□□ -0.59
SFSWAP-202ENST00000535202 CEMIPQ8WUJ3 1361 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms