RNA–Protein interactions for RNA: ENST00000534947.5

COPS7A-204, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-204ENST00000534947 FKBP5Q13451 457 aaPredicted RBP23.16■■□□□ 1.3
COPS7A-204ENST00000534947 OTUD7AQ8TE49 926 aaPredicted RBP23.16■■□□□ 1.3
COPS7A-204ENST00000534947 LMO7Q8WWI1 1683 aa23.15■■□□□ 1.3
COPS7A-204ENST00000534947 KDM3BQ7LBC6 1761 aa23.15■■□□□ 1.3
COPS7A-204ENST00000534947 TRAK2O60296 914 aa23.15■■□□□ 1.3
COPS7A-204ENST00000534947 HSP90AA1P07900 732 aaKnown RBP23.15■■□□□ 1.3
COPS7A-204ENST00000534947 NUTM2GQ5VZR2 741 aa23.15■■□□□ 1.3
COPS7A-204ENST00000534947 SMARCA5O60264 1052 aaPredicted RBP23.14■■□□□ 1.29
COPS7A-204ENST00000534947 CD2BP2O95400 341 aaKnown RBP23.14■■□□□ 1.29
COPS7A-204ENST00000534947 ATP8B2P98198 1209 aa23.14■■□□□ 1.29
COPS7A-204ENST00000534947 PDE1AP54750 535 aa23.13■■□□□ 1.29
COPS7A-204ENST00000534947 TNPO1Q92973 898 aaKnown RBP23.13■■□□□ 1.29
COPS7A-204ENST00000534947 ISY1Q9ULR0 285 aaKnown RBP23.13■■□□□ 1.29
COPS7A-204ENST00000534947 SALL3Q9BXA9 1300 aa23.13■■□□□ 1.29
COPS7A-204ENST00000534947 SETD1BQ9UPS6 1966 aaKnown RBP23.13■■□□□ 1.29
COPS7A-204ENST00000534947 CLEC17AQ6ZS10 378 aa23.13■■□□□ 1.29
COPS7A-204ENST00000534947 FSD2A1L4K1 749 aa23.12■■□□□ 1.29
COPS7A-204ENST00000534947 IBTKQ9P2D0 1353 aaPredicted RBP23.11■■□□□ 1.29
COPS7A-204ENST00000534947 LRRCC1Q9C099 1032 aa23.11■■□□□ 1.29
COPS7A-204ENST00000534947 NCAPD2Q15021 1401 aa23.11■■□□□ 1.29
COPS7A-204ENST00000534947 SKOR2Q2VWA4 1001 aaPredicted RBP23.11■■□□□ 1.29
COPS7A-204ENST00000534947 OVOS2A0A0G2JMS6 1433 aa23.1■■□□□ 1.29
COPS7A-204ENST00000534947 ERC2O15083 957 aa23.1■■□□□ 1.29
COPS7A-204ENST00000534947 RBM42Q9BTD8 480 aaKnown RBP23.1■■□□□ 1.29
COPS7A-204ENST00000534947 SRCIN1Q9C0H9 1055 aa23.1■■□□□ 1.29
COPS7A-204ENST00000534947 LTV1Q96GA3 475 aaPredicted RBP23.09■■□□□ 1.29
COPS7A-204ENST00000534947 SLIT3O75094 1523 aa23.09■■□□□ 1.29
COPS7A-204ENST00000534947 AOX1Q06278 1338 aa23.09■■□□□ 1.29
COPS7A-204ENST00000534947 GOLGA6L3A6NEY3 463 aa23.09■■□□□ 1.29
COPS7A-204ENST00000534947 HDGFL1Q5TGJ6 251 aa23.09■■□□□ 1.29
COPS7A-204ENST00000534947 C14orf37Q86TY3 774 aa23.08■■□□□ 1.29
COPS7A-204ENST00000534947 ADAMTSL3P82987 1691 aa23.08■■□□□ 1.28
COPS7A-204ENST00000534947 APBB1O00213 710 aa23.08■■□□□ 1.28
COPS7A-204ENST00000534947 STAP2Q9UGK3 403 aa23.08■■□□□ 1.28
COPS7A-204ENST00000534947 LMTK3Q96Q04 1460 aa23.07■■□□□ 1.28
COPS7A-204ENST00000534947 ST18O60284 1047 aa23.07■■□□□ 1.28
COPS7A-204ENST00000534947 PSME1Q06323 249 aa23.07■■□□□ 1.28
COPS7A-204ENST00000534947 CAMTA1Q9Y6Y1 1673 aa23.06■■□□□ 1.28
COPS7A-204ENST00000534947 NBPF6Q5VWK0 638 aa23.06■■□□□ 1.28
COPS7A-204ENST00000534947 NBPF4Q96M43 638 aa23.06■■□□□ 1.28
COPS7A-204ENST00000534947 USP44Q9H0E7 712 aa23.06■■□□□ 1.28
COPS7A-204ENST00000534947 UBTFL1P0CB47 393 aaPredicted RBP23.05■■□□□ 1.28
COPS7A-204ENST00000534947 EIF4A1P60842 406 aaKnown RBP23.05■■□□□ 1.28
COPS7A-204ENST00000534947 AKAP4Q5JQC9 854 aa23.05■■□□□ 1.28
COPS7A-204ENST00000534947 EXOC6BQ9Y2D4 811 aa23.05■■□□□ 1.28
COPS7A-204ENST00000534947 MX1P20591 662 aa23.04■■□□□ 1.28
COPS7A-204ENST00000534947 AMOTQ4VCS5 1084 aa23.04■■□□□ 1.28
COPS7A-204ENST00000534947 SSH3Q8TE77 659 aa23.04■■□□□ 1.28
COPS7A-204ENST00000534947 CWC22Q9HCG8 908 aaKnown RBP23.04■■□□□ 1.28
COPS7A-204ENST00000534947 RGPD2P0DJD1 1756 aa23.04■■□□□ 1.28
COPS7A-204ENST00000534947 PNMA6EA0A0J9YXQ4 647 aa23.04■■□□□ 1.28
COPS7A-204ENST00000534947 EPB41L2O43491 1005 aaKnown RBP23.04■■□□□ 1.28
COPS7A-204ENST00000534947 USHBP1Q8N6Y0 703 aa23.04■■□□□ 1.28
COPS7A-204ENST00000534947 LRRFIP2Q9Y608 721 aaKnown RBP23.04■■□□□ 1.28
COPS7A-204ENST00000534947 RAB11FIP3O75154 756 aa23.03■■□□□ 1.28
COPS7A-204ENST00000534947 NUCB2P80303 420 aa23.03■■□□□ 1.28
COPS7A-204ENST00000534947 PLEKHO1Q53GL0 409 aaPredicted RBP23.03■■□□□ 1.28
COPS7A-204ENST00000534947 ESCO1Q5FWF5 840 aa23.03■■□□□ 1.28
COPS7A-204ENST00000534947 NPHP4O75161 1426 aaPredicted RBP23.03■■□□□ 1.28
COPS7A-204ENST00000534947 GOLGA6L22H0YM25 854 aa23.03■■□□□ 1.28
COPS7A-204ENST00000534947 NECTIN2Q92692 538 aa23.01■■□□□ 1.27
COPS7A-204ENST00000534947 MST1RQ04912 1400 aa23.01■■□□□ 1.27
COPS7A-204ENST00000534947 MRE11P49959 708 aa23.01■■□□□ 1.27
COPS7A-204ENST00000534947 POLA2Q14181 598 aa23.01■■□□□ 1.27
COPS7A-204ENST00000534947 FAM43AQ8N2R8 423 aa23.01■■□□□ 1.27
COPS7A-204ENST00000534947 KIF1AQ12756 1690 aa23.01■■□□□ 1.27
COPS7A-204ENST00000534947 ARHGEF25Q86VW2 580 aa23■■□□□ 1.27
COPS7A-204ENST00000534947 IL17RAQ96F46 866 aa23■■□□□ 1.27
COPS7A-204ENST00000534947 TRPM3Q9HCF6 1732 aaPredicted RBP23■■□□□ 1.27
COPS7A-204ENST00000534947 ANAPC15P60006 121 aa22.99■■□□□ 1.27
COPS7A-204ENST00000534947 ESYT1Q9BSJ8 1104 aa22.99■■□□□ 1.27
COPS7A-204ENST00000534947 TEFQ10587 303 aa22.99■■□□□ 1.27
COPS7A-204ENST00000534947 MCCP23508 829 aa22.98■■□□□ 1.27
COPS7A-204ENST00000534947 MCM2P49736 904 aa22.98■■□□□ 1.27
COPS7A-204ENST00000534947 PHAXQ9H814 394 aaKnown RBP22.98■■□□□ 1.27
COPS7A-204ENST00000534947 ADAMTS7Q9UKP4 1686 aa22.98■■□□□ 1.27
COPS7A-204ENST00000534947 CYP2E1P05181 493 aaPredicted RBP22.98■■□□□ 1.27
COPS7A-204ENST00000534947 XRCC6P12956 609 aaKnown RBP eCLIP22.98■■□□□ 1.27
COPS7A-204ENST00000534947 ZNF530Q6P9A1 599 aaPredicted RBP22.98■■□□□ 1.27
COPS7A-204ENST00000534947 GZF1Q9H116 711 aaPredicted RBP22.98■■□□□ 1.27
COPS7A-204ENST00000534947 LGR6Q9HBX8 967 aa22.98■■□□□ 1.27
COPS7A-204ENST00000534947 GCP02774 474 aa22.97■■□□□ 1.27
COPS7A-204ENST00000534947 TRHP20396 242 aaPredicted RBP22.97■■□□□ 1.27
COPS7A-204ENST00000534947 DNAAF4Q8WXU2 420 aa22.96■■□□□ 1.27
COPS7A-204ENST00000534947 FOXD4L1Q9NU39 408 aa22.96■■□□□ 1.27
COPS7A-204ENST00000534947 SIPA1L3O60292 1781 aaPredicted RBP22.96■■□□□ 1.27
COPS7A-204ENST00000534947 CHMLP26374 656 aa22.96■■□□□ 1.27
COPS7A-204ENST00000534947 SSFA2P28290 1259 aa22.96■■□□□ 1.27
COPS7A-204ENST00000534947 BTBD11A6QL63 1104 aa22.95■■□□□ 1.26
COPS7A-204ENST00000534947 HSP90AB4PQ58FF6 505 aa22.95■■□□□ 1.26
COPS7A-204ENST00000534947 BEND3Q5T5X7 828 aa22.95■■□□□ 1.26
COPS7A-204ENST00000534947 HEG1Q9ULI3 1381 aa22.94■■□□□ 1.26
COPS7A-204ENST00000534947 C1orf141Q5JVX7 400 aa22.94■■□□□ 1.26
COPS7A-204ENST00000534947 CHPF2Q9P2E5 772 aa22.94■■□□□ 1.26
COPS7A-204ENST00000534947 RNMTO43148 476 aaKnown RBP22.94■■□□□ 1.26
COPS7A-204ENST00000534947 BAG4O95429 457 aaKnown RBP22.94■■□□□ 1.26
COPS7A-204ENST00000534947 PPP1R42Q7Z4L9 355 aa22.94■■□□□ 1.26
COPS7A-204ENST00000534947 DBF4Q9UBU7 674 aaPredicted RBP22.94■■□□□ 1.26
COPS7A-204ENST00000534947 HDAC5Q9UQL6 1122 aa22.94■■□□□ 1.26
COPS7A-204ENST00000534947 AK9Q5TCS8 1911 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms