RNA–Protein interactions for RNA: ENST00000534375.1

PICALM-222, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 2

Gene PICALM, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-222	ENST00000534375	RGL4	Q8IZJ4	473 aa		6.26	□□□□□ -1.41
PICALM-222	ENST00000534375	CYP4X1	Q8N118	509 aa		6.26	□□□□□ -1.41
PICALM-222	ENST00000534375	HMGB1	P09429	215 aa	Known RBP	6.25	□□□□□ -1.41
PICALM-222	ENST00000534375	CDK11B	P21127	795 aa	Known RBP	6.25	□□□□□ -1.41
PICALM-222	ENST00000534375	HDLBP	Q00341	1268 aa	Known RBP	6.25	□□□□□ -1.41
PICALM-222	ENST00000534375	ERFE	Q4G0M1	354 aa		6.25	□□□□□ -1.41
PICALM-222	ENST00000534375	C4orf48	Q5BLP8	95 aa		6.25	□□□□□ -1.41
PICALM-222	ENST00000534375	HINFP	Q9BQA5	517 aa		6.25	□□□□□ -1.41
PICALM-222	ENST00000534375	BACH2	Q9BYV9	841 aa		6.25	□□□□□ -1.41
PICALM-222	ENST00000534375	UNC93B1	Q9H1C4	597 aa		6.25	□□□□□ -1.41
PICALM-222	ENST00000534375	TOR4A	Q9NXH8	423 aa		6.25	□□□□□ -1.41
PICALM-222	ENST00000534375	CDK11A	Q9UQ88	783 aa	Predicted RBP	6.25	□□□□□ -1.41
PICALM-222	ENST00000534375	MAGEB6P1	A0A0J9YX57	407 aa		6.24	□□□□□ -1.41
PICALM-222	ENST00000534375	PSME1	Q06323	249 aa		6.24	□□□□□ -1.41
PICALM-222	ENST00000534375	SF3B2	Q13435	895 aa	Known RBP	6.24	□□□□□ -1.41
PICALM-222	ENST00000534375	COL19A1	Q14993	1142 aa		6.24	□□□□□ -1.41
PICALM-222	ENST00000534375	EAPP	Q56P03	285 aa	Predicted RBP	6.24	□□□□□ -1.41
PICALM-222	ENST00000534375	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	6.24	□□□□□ -1.41
PICALM-222	ENST00000534375	WNT7A	O00755	349 aa		6.23	□□□□□ -1.41
PICALM-222	ENST00000534375	TRIM32	Q13049	653 aa		6.23	□□□□□ -1.41
PICALM-222	ENST00000534375	NAA30	Q147X3	362 aa	Predicted RBP	6.23	□□□□□ -1.41
PICALM-222	ENST00000534375	LCE2A	Q5TA79	106 aa	Predicted RBP	6.23	□□□□□ -1.41
PICALM-222	ENST00000534375	C9orf131	Q5VYM1	1079 aa		6.23	□□□□□ -1.41
PICALM-222	ENST00000534375	TMC7	Q7Z402	723 aa		6.23	□□□□□ -1.41
PICALM-222	ENST00000534375	CCDC24	Q8N4L8	307 aa		6.23	□□□□□ -1.41
PICALM-222	ENST00000534375	HELQ	Q8TDG4	1101 aa		6.23	□□□□□ -1.41
PICALM-222	ENST00000534375	FOXJ1	Q92949	421 aa		6.23	□□□□□ -1.41
PICALM-222	ENST00000534375	RNF19A	Q9NV58	838 aa		6.23	□□□□□ -1.41
PICALM-222	ENST00000534375	TTC24	A2A3L6	582 aa	Predicted RBP	6.22	□□□□□ -1.41
PICALM-222	ENST00000534375	ESPN	B1AK53	854 aa		6.22	□□□□□ -1.41
PICALM-222	ENST00000534375	SMARCA5	O60264	1052 aa	Predicted RBP	6.22	□□□□□ -1.41
PICALM-222	ENST00000534375	AVP	P01185	164 aa		6.22	□□□□□ -1.41
PICALM-222	ENST00000534375	RAD51AP2	Q09MP3	1159 aa		6.22	□□□□□ -1.41
PICALM-222	ENST00000534375	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	6.22	□□□□□ -1.41
PICALM-222	ENST00000534375	AAAS	Q9NRG9	546 aa		6.22	□□□□□ -1.41
PICALM-222	ENST00000534375	RBM19	Q9Y4C8	960 aa	Known RBP	6.22	□□□□□ -1.41
PICALM-222	ENST00000534375	PCDHB11	Q9Y5F2	797 aa		6.22	□□□□□ -1.41
PICALM-222	ENST00000534375		M0R2N6	131 aa		6.21	□□□□□ -1.42
PICALM-222	ENST00000534375	STAU1	O95793	577 aa	Known RBP	6.21	□□□□□ -1.42
PICALM-222	ENST00000534375	NPR3	P17342	541 aa		6.21	□□□□□ -1.42
PICALM-222	ENST00000534375	ERCC5	P28715	1186 aa	Predicted RBP	6.21	□□□□□ -1.42
PICALM-222	ENST00000534375	FMR1	Q06787	632 aa	Known RBP eCLIP	6.21	□□□□□ -1.42
PICALM-222	ENST00000534375	LINC01559	Q495D7	138 aa		6.21	□□□□□ -1.42
PICALM-222	ENST00000534375	CRIPAK	Q8N1N5	446 aa		6.21	□□□□□ -1.42
PICALM-222	ENST00000534375	SNIP1	Q8TAD8	396 aa	Known RBP	6.21	□□□□□ -1.42
PICALM-222	ENST00000534375	UBXN4	Q92575	508 aa		6.21	□□□□□ -1.42
PICALM-222	ENST00000534375	FAM161B	Q96MY7	647 aa		6.21	□□□□□ -1.42
PICALM-222	ENST00000534375	RBCK1	Q9BYM8	510 aa		6.21	□□□□□ -1.42
PICALM-222	ENST00000534375	ZNF358	Q9NW07	568 aa		6.21	□□□□□ -1.42
PICALM-222	ENST00000534375	PPP1R1B	Q9UD71	204 aa	Predicted RBP	6.21	□□□□□ -1.42
PICALM-222	ENST00000534375	TMEM229A	B2RXF0	380 aa		6.2	□□□□□ -1.42
PICALM-222	ENST00000534375	ST8SIA5	O15466	376 aa		6.2	□□□□□ -1.42
PICALM-222	ENST00000534375	TREH	O43280	583 aa		6.2	□□□□□ -1.42
PICALM-222	ENST00000534375	IGHA2	P01877	340 aa		6.2	□□□□□ -1.42
PICALM-222	ENST00000534375	MPST	P25325	297 aa		6.2	□□□□□ -1.42
PICALM-222	ENST00000534375	SCTR	P47872	440 aa		6.2	□□□□□ -1.42
PICALM-222	ENST00000534375	WNT7B	P56706	349 aa		6.2	□□□□□ -1.42
PICALM-222	ENST00000534375	CTC1	Q2NKJ3	1217 aa		6.2	□□□□□ -1.42
PICALM-222	ENST00000534375	COL26A1	Q96A83	441 aa		6.2	□□□□□ -1.42
PICALM-222	ENST00000534375	C1QTNF2	Q9BXJ5	285 aa		6.2	□□□□□ -1.42
PICALM-222	ENST00000534375	SCAMP3	O14828	347 aa	Known RBP	6.19	□□□□□ -1.42
PICALM-222	ENST00000534375	AXIN1	O15169	862 aa		6.19	□□□□□ -1.42
PICALM-222	ENST00000534375	PTCD1	O75127	700 aa	Known RBP	6.19	□□□□□ -1.42
PICALM-222	ENST00000534375	SMCP	P49901	116 aa	Predicted RBP	6.19	□□□□□ -1.42
PICALM-222	ENST00000534375	USP4	Q13107	963 aa		6.19	□□□□□ -1.42
PICALM-222	ENST00000534375	METTL16	Q86W50	562 aa	Known RBP	6.19	□□□□□ -1.42
PICALM-222	ENST00000534375	PIK3R5	Q8WYR1	880 aa		6.19	□□□□□ -1.42
PICALM-222	ENST00000534375	BAP1	Q92560	729 aa		6.19	□□□□□ -1.42
PICALM-222	ENST00000534375	SLC10A4	Q96EP9	437 aa		6.19	□□□□□ -1.42
PICALM-222	ENST00000534375	MRGPRX2	Q96LB1	330 aa		6.19	□□□□□ -1.42
PICALM-222	ENST00000534375	SPATA32	Q96LK8	384 aa		6.19	□□□□□ -1.42
PICALM-222	ENST00000534375	SAP130	Q9H0E3	1048 aa		6.19	□□□□□ -1.42
PICALM-222	ENST00000534375	DSC3	Q14574	896 aa		6.18	□□□□□ -1.42
PICALM-222	ENST00000534375	NBPF20	Q3BBV1	942 aa		6.18	□□□□□ -1.42
PICALM-222	ENST00000534375	RC3H1	Q5TC82	1133 aa	Known RBP	6.18	□□□□□ -1.42
PICALM-222	ENST00000534375	RNF20	Q5VTR2	975 aa		6.18	□□□□□ -1.42
PICALM-222	ENST00000534375	SETDB2	Q96T68	719 aa		6.18	□□□□□ -1.42
PICALM-222	ENST00000534375	POTEC	B2RU33	542 aa		6.17	□□□□□ -1.42
PICALM-222	ENST00000534375	FOXO3	O43524	673 aa		6.17	□□□□□ -1.42
PICALM-222	ENST00000534375	IGFBP4	P22692	258 aa		6.17	□□□□□ -1.42
PICALM-222	ENST00000534375	SCNN1D	P51172	638 aa		6.17	□□□□□ -1.42
PICALM-222	ENST00000534375	EPHA4	P54764	986 aa		6.17	□□□□□ -1.42
PICALM-222	ENST00000534375	SF3A1	Q15459	793 aa	Known RBP	6.17	□□□□□ -1.42
PICALM-222	ENST00000534375	ZNF511	Q8NB15	262 aa		6.17	□□□□□ -1.42
PICALM-222	ENST00000534375	CCDC87	Q9NVE4	849 aa		6.17	□□□□□ -1.42
PICALM-222	ENST00000534375	GPR182	O15218	404 aa		6.16	□□□□□ -1.42
PICALM-222	ENST00000534375	FZD6	O60353	706 aa		6.16	□□□□□ -1.42
PICALM-222	ENST00000534375	FAM13A	O94988	1023 aa		6.16	□□□□□ -1.42
PICALM-222	ENST00000534375	SMPD1	P17405	629 aa		6.16	□□□□□ -1.42
PICALM-222	ENST00000534375	RAB15	P59190	212 aa		6.16	□□□□□ -1.42
PICALM-222	ENST00000534375	SKOR1	P84550	965 aa		6.16	□□□□□ -1.42
PICALM-222	ENST00000534375	TREML4	Q6UXN2	200 aa		6.16	□□□□□ -1.42
PICALM-222	ENST00000534375	BPHL	Q86WA6	291 aa	Predicted RBP	6.16	□□□□□ -1.42
PICALM-222	ENST00000534375	TNS4	Q8IZW8	715 aa		6.16	□□□□□ -1.42
PICALM-222	ENST00000534375	SCG3	Q8WXD2	468 aa	Known RBP	6.16	□□□□□ -1.42
PICALM-222	ENST00000534375	TINF2	Q9BSI4	451 aa		6.16	□□□□□ -1.42
PICALM-222	ENST00000534375	PARP2	Q9UGN5	583 aa		6.16	□□□□□ -1.42
PICALM-222	ENST00000534375	WWC3	Q9ULE0	1092 aa		6.16	□□□□□ -1.42
PICALM-222	ENST00000534375	TNFRSF10B	O14763	440 aa		6.15	□□□□□ -1.42
PICALM-222	ENST00000534375	LDHB	P07195	334 aa	Known RBP	6.15	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 203.3 ms