RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 ATP9BO43861 1147 aa8.16□□□□□ -1.1
ITGB1-219ENST00000534049 ATP1A2P50993 1020 aa8.16□□□□□ -1.1
ITGB1-219ENST00000534049 NCOA4Q13772 614 aa8.16□□□□□ -1.1
ITGB1-219ENST00000534049 PPARGC1BQ86YN6 1023 aaKnown RBP8.16□□□□□ -1.1
ITGB1-219ENST00000534049 VWA5B2Q8N398 1253 aa8.16□□□□□ -1.1
ITGB1-219ENST00000534049 F11P03951 625 aa8.15□□□□□ -1.1
ITGB1-219ENST00000534049 SCNN1DP51172 638 aa8.15□□□□□ -1.1
ITGB1-219ENST00000534049 GTF2IP78347 998 aa8.15□□□□□ -1.1
ITGB1-219ENST00000534049 LBRQ14739 615 aaKnown RBP8.15□□□□□ -1.1
ITGB1-219ENST00000534049 GLMNQ92990 594 aa8.15□□□□□ -1.1
ITGB1-219ENST00000534049 PSME1Q06323 249 aa8.14□□□□□ -1.11
ITGB1-219ENST00000534049 RIPOR1Q6ZS17 1223 aa8.14□□□□□ -1.11
ITGB1-219ENST00000534049 ADAMTS19Q8TE59 1207 aa8.14□□□□□ -1.11
ITGB1-219ENST00000534049 SLC4A9Q96Q91 983 aa8.14□□□□□ -1.11
ITGB1-219ENST00000534049 PCDHGA11Q9Y5H2 935 aa8.14□□□□□ -1.11
ITGB1-219ENST00000534049 USP17L3A6NCW0 530 aa8.13□□□□□ -1.11
ITGB1-219ENST00000534049 USP17L4A6NCW7 530 aa8.13□□□□□ -1.11
ITGB1-219ENST00000534049 SMTNP53814 917 aa8.13□□□□□ -1.11
ITGB1-219ENST00000534049 USP17L2Q6R6M4 530 aa8.13□□□□□ -1.11
ITGB1-219ENST00000534049 USP17L1Q7RTZ2 530 aa8.13□□□□□ -1.11
ITGB1-219ENST00000534049 C1orf216Q8TAB5 229 aa8.13□□□□□ -1.11
ITGB1-219ENST00000534049 TRERF1Q96PN7 1200 aa8.13□□□□□ -1.11
ITGB1-219ENST00000534049 GAS2L1Q99501 681 aaPredicted RBP8.13□□□□□ -1.11
ITGB1-219ENST00000534049 COL25A1Q9BXS0 654 aaPredicted RBP8.13□□□□□ -1.11
ITGB1-219ENST00000534049 NIFKQ9BYG3 293 aaKnown RBP8.13□□□□□ -1.11
ITGB1-219ENST00000534049 CSB-PGBD3P0DP91 1061 aa8.12□□□□□ -1.11
ITGB1-219ENST00000534049 PGBD3Q8N328 593 aa8.12□□□□□ -1.11
ITGB1-219ENST00000534049 ZNF837Q96EG3 531 aaPredicted RBP8.12□□□□□ -1.11
ITGB1-219ENST00000534049 CALR3Q96L12 384 aaKnown RBP8.12□□□□□ -1.11
ITGB1-219ENST00000534049 UCN2Q96RP3 112 aa8.12□□□□□ -1.11
ITGB1-219ENST00000534049 CDK2AP1O14519 115 aa8.11□□□□□ -1.11
ITGB1-219ENST00000534049 C4orf17Q53FE4 359 aa8.11□□□□□ -1.11
ITGB1-219ENST00000534049 GPR161Q8N6U8 529 aaKnown RBP8.11□□□□□ -1.11
ITGB1-219ENST00000534049 RBM19Q9Y4C8 960 aaKnown RBP8.11□□□□□ -1.11
ITGB1-219ENST00000534049 A6NJY4 79 aa8.1□□□□□ -1.11
ITGB1-219ENST00000534049 TMEM229AB2RXF0 380 aa8.1□□□□□ -1.11
ITGB1-219ENST00000534049 MTFR1Q15390 333 aa8.1□□□□□ -1.11
ITGB1-219ENST00000534049 TBC1D9Q6ZT07 1266 aa8.1□□□□□ -1.11
ITGB1-219ENST00000534049 LARGE2Q8N3Y3 721 aa8.1□□□□□ -1.11
ITGB1-219ENST00000534049 CNTNAP3BQ96NU0 1288 aa8.1□□□□□ -1.11
ITGB1-219ENST00000534049 CNTNAP3Q9BZ76 1288 aa8.1□□□□□ -1.11
ITGB1-219ENST00000534049 NUCKS1Q9H1E3 243 aaKnown RBP8.1□□□□□ -1.11
ITGB1-219ENST00000534049 CUEDC1Q9NWM3 386 aaPredicted RBP8.1□□□□□ -1.11
ITGB1-219ENST00000534049 PHF24Q9UPV7 400 aa8.1□□□□□ -1.11
ITGB1-219ENST00000534049 PALM3A6NDB9 673 aaPredicted RBP8.09□□□□□ -1.11
ITGB1-219ENST00000534049 NBPF1Q3BBV0 1214 aa8.09□□□□□ -1.11
ITGB1-219ENST00000534049 EFHC2Q5JST6 749 aa8.09□□□□□ -1.11
ITGB1-219ENST00000534049 DEPDC4Q8N2C3 294 aa8.09□□□□□ -1.11
ITGB1-219ENST00000534049 NSFL1CQ9UNZ2 370 aaKnown RBP8.09□□□□□ -1.11
ITGB1-219ENST00000534049 M0R2N6 131 aa8.08□□□□□ -1.12
ITGB1-219ENST00000534049 PHKA2P46019 1235 aa8.08□□□□□ -1.12
ITGB1-219ENST00000534049 SRSF11Q05519 484 aaKnown RBP8.08□□□□□ -1.12
ITGB1-219ENST00000534049 DBN1Q16643 649 aa8.08□□□□□ -1.12
ITGB1-219ENST00000534049 DNAAF2Q9NVR5 837 aaKnown RBP8.08□□□□□ -1.12
ITGB1-219ENST00000534049 MKRN1Q9UHC7 482 aaKnown RBP8.08□□□□□ -1.12
ITGB1-219ENST00000534049 SERTAD1Q9UHV2 236 aa8.08□□□□□ -1.12
ITGB1-219ENST00000534049 STAU1O95793 577 aaKnown RBP8.07□□□□□ -1.12
ITGB1-219ENST00000534049 SLURP2P0DP57 97 aa8.07□□□□□ -1.12
ITGB1-219ENST00000534049 PLA2G4AP47712 749 aa8.07□□□□□ -1.12
ITGB1-219ENST00000534049 KRT76Q01546 638 aa8.07□□□□□ -1.12
ITGB1-219ENST00000534049 CFHR5Q9BXR6 569 aa8.07□□□□□ -1.12
ITGB1-219ENST00000534049 CRISPLD1Q9H336 500 aa8.07□□□□□ -1.12
ITGB1-219ENST00000534049 MBIPQ9NS73 344 aa8.07□□□□□ -1.12
ITGB1-219ENST00000534049 ZNF358Q9NW07 568 aa8.07□□□□□ -1.12
ITGB1-219ENST00000534049 ZDHHC3Q9NYG2 299 aa8.07□□□□□ -1.12
ITGB1-219ENST00000534049 MAFBQ9Y5Q3 323 aaPredicted RBP8.07□□□□□ -1.12
ITGB1-219ENST00000534049 TATP17735 454 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-219ENST00000534049 LORP23490 312 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-219ENST00000534049 MSX1P28360 303 aa8.06□□□□□ -1.12
ITGB1-219ENST00000534049 RNFT1Q5M7Z0 435 aa8.06□□□□□ -1.12
ITGB1-219ENST00000534049 CCDC102BQ68D86 513 aa8.06□□□□□ -1.12
ITGB1-219ENST00000534049 FIGNL1Q6PIW4 674 aa8.06□□□□□ -1.12
ITGB1-219ENST00000534049 SIX5Q8N196 739 aa8.06□□□□□ -1.12
ITGB1-219ENST00000534049 OGFOD1Q8N543 542 aa8.06□□□□□ -1.12
ITGB1-219ENST00000534049 TPCN2Q8NHX9 752 aa8.06□□□□□ -1.12
ITGB1-219ENST00000534049 GTPBP3Q969Y2 492 aaKnown RBP8.06□□□□□ -1.12
ITGB1-219ENST00000534049 PPP1R12CQ9BZL4 782 aa8.06□□□□□ -1.12
ITGB1-219ENST00000534049 GPAMQ9HCL2 828 aa8.06□□□□□ -1.12
ITGB1-219ENST00000534049 SCHIP1Q9P0W5 487 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-219ENST00000534049 TFIP11Q9UBB9 837 aaKnown RBP8.06□□□□□ -1.12
ITGB1-219ENST00000534049 CABP1Q9NZU7 370 aa8.05□□□□□ -1.12
ITGB1-219ENST00000534049 IQSEC3Q9UPP2 1182 aaPredicted RBP8.05□□□□□ -1.12
ITGB1-219ENST00000534049 LARP1Q6PKG0 1096 aaKnown RBP8.04□□□□□ -1.12
ITGB1-219ENST00000534049 NLRP8Q86W28 1048 aa8.04□□□□□ -1.12
ITGB1-219ENST00000534049 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.04□□□□□ -1.12
ITGB1-219ENST00000534049 CHMP3Q9Y3E7 222 aa8.04□□□□□ -1.12
ITGB1-219ENST00000534049 GPC6Q9Y625 555 aaPredicted RBP8.04□□□□□ -1.12
ITGB1-219ENST00000534049 ADAMTS2O95450 1211 aa8.03□□□□□ -1.12
ITGB1-219ENST00000534049 RASA1P20936 1047 aa8.03□□□□□ -1.12
ITGB1-219ENST00000534049 CLDN10P78369 228 aa8.03□□□□□ -1.12
ITGB1-219ENST00000534049 GAS6Q14393 721 aa8.03□□□□□ -1.12
ITGB1-219ENST00000534049 ZNF295-AS1Q8N0V1 137 aa8.03□□□□□ -1.12
ITGB1-219ENST00000534049 AIDAQ96BJ3 306 aa8.03□□□□□ -1.12
ITGB1-219ENST00000534049 ATXN7L1Q9ULK2 861 aaPredicted RBP8.03□□□□□ -1.12
ITGB1-219ENST00000534049 ZBTB7BO15156 539 aaPredicted RBP8.02□□□□□ -1.13
ITGB1-219ENST00000534049 MX2P20592 715 aa8.02□□□□□ -1.13
ITGB1-219ENST00000534049 MAP2K3P46734 347 aa8.02□□□□□ -1.13
ITGB1-219ENST00000534049 EPHA4P54764 986 aa8.02□□□□□ -1.13
ITGB1-219ENST00000534049 FOXK2Q01167 660 aa8.02□□□□□ -1.13
ITGB1-219ENST00000534049 MAP3K10Q02779 954 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms