RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 ZNF530Q6P9A1 599 aaPredicted RBP23.73■■□□□ 1.39
VPS51-213ENST00000533827 KDM6AO15550 1401 aaPredicted RBP23.73■■□□□ 1.39
VPS51-213ENST00000533827 ATP6V1AP38606 617 aa23.72■■□□□ 1.39
VPS51-213ENST00000533827 MTHFSP49914 203 aa23.71■■□□□ 1.39
VPS51-213ENST00000533827 NLGN2Q8NFZ4 835 aa23.71■■□□□ 1.39
VPS51-213ENST00000533827 ZNF831Q5JPB2 1677 aa23.7■■□□□ 1.39
VPS51-213ENST00000533827 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.7■■□□□ 1.38
VPS51-213ENST00000533827 SSFA2P28290 1259 aa23.7■■□□□ 1.38
VPS51-213ENST00000533827 SMIM5Q71RC9 77 aa23.7■■□□□ 1.38
VPS51-213ENST00000533827 PHF14O94880 888 aa23.69■■□□□ 1.38
VPS51-213ENST00000533827 GPR162Q16538 588 aa23.68■■□□□ 1.38
VPS51-213ENST00000533827 C1orf141Q5JVX7 400 aa23.68■■□□□ 1.38
VPS51-213ENST00000533827 CC2D1BQ5T0F9 858 aaKnown RBP23.68■■□□□ 1.38
VPS51-213ENST00000533827 SLC4A9Q96Q91 983 aa23.68■■□□□ 1.38
VPS51-213ENST00000533827 CHD4Q14839 1912 aa23.67■■□□□ 1.38
VPS51-213ENST00000533827 CABP4P57796 275 aa23.67■■□□□ 1.38
VPS51-213ENST00000533827 GOLGB1Q14789 3259 aaKnown RBP23.66■■□□□ 1.38
VPS51-213ENST00000533827 GNPATO15228 680 aa23.66■■□□□ 1.38
VPS51-213ENST00000533827 NPC1L1Q9UHC9 1359 aa23.65■■□□□ 1.38
VPS51-213ENST00000533827 RBM42Q9BTD8 480 aaKnown RBP23.64■■□□□ 1.37
VPS51-213ENST00000533827 COL5A3P25940 1745 aaPredicted RBP23.64■■□□□ 1.37
VPS51-213ENST00000533827 SCN11AQ9UI33 1791 aa23.63■■□□□ 1.37
VPS51-213ENST00000533827 CD2APQ9Y5K6 639 aa23.63■■□□□ 1.37
VPS51-213ENST00000533827 DIAPH1O60610 1272 aaKnown RBP23.62■■□□□ 1.37
VPS51-213ENST00000533827 NFATC2IPQ8NCF5 419 aa23.62■■□□□ 1.37
VPS51-213ENST00000533827 HMOX1P09601 288 aa23.61■■□□□ 1.37
VPS51-213ENST00000533827 AKAP4Q5JQC9 854 aa23.61■■□□□ 1.37
VPS51-213ENST00000533827 RC3H1Q5TC82 1133 aaKnown RBP23.61■■□□□ 1.37
VPS51-213ENST00000533827 PELP1Q8IZL8 1130 aaKnown RBP23.61■■□□□ 1.37
VPS51-213ENST00000533827 ZNF784Q8NCA9 323 aaPredicted RBP23.6■■□□□ 1.37
VPS51-213ENST00000533827 CNTNAP4Q9C0A0 1308 aa23.59■■□□□ 1.37
VPS51-213ENST00000533827 YBX3P16989 372 aaKnown RBP eCLIP23.59■■□□□ 1.37
VPS51-213ENST00000533827 RTCBQ9Y3I0 505 aaKnown RBP23.59■■□□□ 1.37
VPS51-213ENST00000533827 COL3A1P02461 1466 aaPredicted RBP23.59■■□□□ 1.37
VPS51-213ENST00000533827 PTCD1O75127 700 aaKnown RBP23.57■■□□□ 1.36
VPS51-213ENST00000533827 TRAPPC3LQ5T215 181 aa23.57■■□□□ 1.36
VPS51-213ENST00000533827 CICQ96RK0 1608 aaPredicted RBP23.57■■□□□ 1.36
VPS51-213ENST00000533827 MTHFSDQ2M296 383 aaKnown RBP23.56■■□□□ 1.36
VPS51-213ENST00000533827 LGR6Q9HBX8 967 aa23.56■■□□□ 1.36
VPS51-213ENST00000533827 TJP1Q07157 1748 aa23.56■■□□□ 1.36
VPS51-213ENST00000533827 ADAMTS7Q9UKP4 1686 aa23.55■■□□□ 1.36
VPS51-213ENST00000533827 MYH14Q7Z406 1995 aaKnown RBP23.55■■□□□ 1.36
VPS51-213ENST00000533827 GRIN3BO60391 1043 aa23.55■■□□□ 1.36
VPS51-213ENST00000533827 RPS6KA4O75676 772 aa23.55■■□□□ 1.36
VPS51-213ENST00000533827 ADRA2BP18089 450 aa23.55■■□□□ 1.36
VPS51-213ENST00000533827 CNGB1Q14028 1251 aaPredicted RBP23.55■■□□□ 1.36
VPS51-213ENST00000533827 ARHGEF1Q92888 912 aaKnown RBP23.55■■□□□ 1.36
VPS51-213ENST00000533827 SLC52A2Q9HAB3 445 aa23.55■■□□□ 1.36
VPS51-213ENST00000533827 MRC1P22897 1456 aa23.55■■□□□ 1.36
VPS51-213ENST00000533827 VIRMAQ69YN4 1812 aaKnown RBP23.54■■□□□ 1.36
VPS51-213ENST00000533827 RNMTO43148 476 aaKnown RBP23.54■■□□□ 1.36
VPS51-213ENST00000533827 C4AP0C0L4 1744 aa23.51■■□□□ 1.35
VPS51-213ENST00000533827 MMP10P09238 476 aa23.51■■□□□ 1.35
VPS51-213ENST00000533827 CRKLP46109 303 aaKnown RBP23.51■■□□□ 1.35
VPS51-213ENST00000533827 NLGN1Q8N2Q7 840 aa23.51■■□□□ 1.35
VPS51-213ENST00000533827 U2SURPO15042 1029 aaKnown RBP23.49■■□□□ 1.35
VPS51-213ENST00000533827 GYS1P13807 737 aa23.49■■□□□ 1.35
VPS51-213ENST00000533827 RFC4P35249 363 aa23.49■■□□□ 1.35
VPS51-213ENST00000533827 KIF13BQ9NQT8 1826 aa23.48■■□□□ 1.35
VPS51-213ENST00000533827 SLC39A6Q13433 755 aa23.47■■□□□ 1.35
VPS51-213ENST00000533827 INTS5Q6P9B9 1019 aaKnown RBP23.47■■□□□ 1.35
VPS51-213ENST00000533827 KCPQ6ZWJ8 1503 aa23.47■■□□□ 1.35
VPS51-213ENST00000533827 DNAJC10Q8IXB1 793 aa23.46■■□□□ 1.35
VPS51-213ENST00000533827 KIAA1551Q9HCM1 1747 aa23.45■■□□□ 1.34
VPS51-213ENST00000533827 C10orf71Q711Q0 1435 aa23.43■■□□□ 1.34
VPS51-213ENST00000533827 UBR2Q8IWV8 1755 aa23.43■■□□□ 1.34
VPS51-213ENST00000533827 GAS2L2Q8NHY3 880 aa23.43■■□□□ 1.34
VPS51-213ENST00000533827 PXDNLA1KZ92 1463 aa23.43■■□□□ 1.34
VPS51-213ENST00000533827 USP42Q9H9J4 1324 aaKnown RBP23.42■■□□□ 1.34
VPS51-213ENST00000533827 CYP19A1P11511 503 aaPredicted RBP23.42■■□□□ 1.34
VPS51-213ENST00000533827 CFAP53Q96M91 514 aa23.42■■□□□ 1.34
VPS51-213ENST00000533827 CCDC87Q9NVE4 849 aa23.42■■□□□ 1.34
VPS51-213ENST00000533827 SRP68Q9UHB9 627 aaKnown RBP23.42■■□□□ 1.34
VPS51-213ENST00000533827 GNAT3A8MTJ3 354 aa23.41■■□□□ 1.34
VPS51-213ENST00000533827 PPP2R1AP30153 589 aa23.41■■□□□ 1.34
VPS51-213ENST00000533827 TGFB2P61812 414 aa23.41■■□□□ 1.34
VPS51-213ENST00000533827 VSIG10Q8N0Z9 540 aa23.41■■□□□ 1.34
VPS51-213ENST00000533827 IL17REQ8NFR9 667 aa23.41■■□□□ 1.34
VPS51-213ENST00000533827 WWC3Q9ULE0 1092 aa23.41■■□□□ 1.34
VPS51-213ENST00000533827 PARP3Q9Y6F1 533 aa23.41■■□□□ 1.34
VPS51-213ENST00000533827 FKBP8Q14318 412 aa23.4■■□□□ 1.34
VPS51-213ENST00000533827 RSPH6AQ9H0K4 717 aa23.4■■□□□ 1.34
VPS51-213ENST00000533827 SIPA1L3O60292 1781 aaPredicted RBP23.4■■□□□ 1.34
VPS51-213ENST00000533827 N4BP2Q86UW6 1770 aaPredicted RBP23.4■■□□□ 1.34
VPS51-213ENST00000533827 SOS1Q07889 1333 aaPredicted RBP23.39■■□□□ 1.34
VPS51-213ENST00000533827 PRKAR2BP31323 418 aa23.38■■□□□ 1.33
VPS51-213ENST00000533827 PHACTR3Q96KR7 559 aa23.38■■□□□ 1.33
VPS51-213ENST00000533827 TEFQ10587 303 aa23.37■■□□□ 1.33
VPS51-213ENST00000533827 NUDCQ9Y266 331 aa23.37■■□□□ 1.33
VPS51-213ENST00000533827 A0A0G2JLW4 131 aa23.36■■□□□ 1.33
VPS51-213ENST00000533827 TTC5Q8N0Z6 440 aa23.36■■□□□ 1.33
VPS51-213ENST00000533827 ZBTB1Q9Y2K1 713 aa23.36■■□□□ 1.33
VPS51-213ENST00000533827 CEMIPQ8WUJ3 1361 aa23.36■■□□□ 1.33
VPS51-213ENST00000533827 TM4SF1P30408 202 aa23.35■■□□□ 1.33
VPS51-213ENST00000533827 DDR1Q08345 913 aa23.35■■□□□ 1.33
VPS51-213ENST00000533827 USPL1Q5W0Q7 1092 aa23.35■■□□□ 1.33
VPS51-213ENST00000533827 ADCY9O60503 1353 aa23.35■■□□□ 1.33
VPS51-213ENST00000533827 ATP10DQ9P241 1426 aa23.34■■□□□ 1.33
VPS51-213ENST00000533827 ZPR1O75312 459 aa23.34■■□□□ 1.33
VPS51-213ENST00000533827 DPEP1P16444 411 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms