RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 TDO2P48775 406 aa9.3□□□□□ -0.92
PTPRK-219ENST00000531050 MAP2K1Q02750 393 aaPredicted RBP9.3□□□□□ -0.92
PTPRK-219ENST00000531050 CCDC183Q5T5S1 534 aa9.3□□□□□ -0.92
PTPRK-219ENST00000531050 CEP135Q66GS9 1140 aa9.3□□□□□ -0.92
PTPRK-219ENST00000531050 FBXO18Q8NFZ0 1043 aa9.3□□□□□ -0.92
PTPRK-219ENST00000531050 FUCA2Q9BTY2 467 aa9.3□□□□□ -0.92
PTPRK-219ENST00000531050 DEF6Q9H4E7 631 aa9.3□□□□□ -0.92
PTPRK-219ENST00000531050 CWC15Q9P013 229 aaKnown RBP9.3□□□□□ -0.92
PTPRK-219ENST00000531050 RAI14Q9P0K7 980 aa9.3□□□□□ -0.92
PTPRK-219ENST00000531050 GPRASP1Q5JY77 1395 aa9.29□□□□□ -0.92
PTPRK-219ENST00000531050 PRDM15P57071 1507 aaPredicted RBP9.29□□□□□ -0.92
PTPRK-219ENST00000531050 POLR3GO15318 223 aaPredicted RBP9.29□□□□□ -0.92
PTPRK-219ENST00000531050 ZKSCAN2Q63HK3 967 aa9.29□□□□□ -0.92
PTPRK-219ENST00000531050 UBXN6Q9BZV1 441 aa9.29□□□□□ -0.92
PTPRK-219ENST00000531050 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.29□□□□□ -0.92
PTPRK-219ENST00000531050 KCNA4P22459 653 aa9.29□□□□□ -0.92
PTPRK-219ENST00000531050 MAGEA9P43362 315 aa9.29□□□□□ -0.92
PTPRK-219ENST00000531050 C14orf37Q86TY3 774 aa9.29□□□□□ -0.92
PTPRK-219ENST00000531050 SUGP1Q8IWZ8 645 aaKnown RBP9.29□□□□□ -0.92
PTPRK-219ENST00000531050 MNS1Q8NEH6 495 aa9.29□□□□□ -0.92
PTPRK-219ENST00000531050 GOLGA5Q8TBA6 731 aa9.29□□□□□ -0.92
PTPRK-219ENST00000531050 FAM212AQ96EL1 285 aa9.29□□□□□ -0.92
PTPRK-219ENST00000531050 SH3BP1Q9Y3L3 701 aa9.29□□□□□ -0.92
PTPRK-219ENST00000531050 PLCH2O75038 1416 aa9.28□□□□□ -0.92
PTPRK-219ENST00000531050 ATP10AO60312 1499 aa9.28□□□□□ -0.92
PTPRK-219ENST00000531050 WDR7Q9Y4E6 1490 aa9.28□□□□□ -0.92
PTPRK-219ENST00000531050 RNF17Q9BXT8 1623 aaKnown RBP9.28□□□□□ -0.92
PTPRK-219ENST00000531050 CLCN6P51797 869 aa9.28□□□□□ -0.92
PTPRK-219ENST00000531050 TPM4P67936 248 aa9.28□□□□□ -0.92
PTPRK-219ENST00000531050 IQUBQ8NA54 791 aa9.28□□□□□ -0.92
PTPRK-219ENST00000531050 ZNF592Q92610 1267 aa9.28□□□□□ -0.92
PTPRK-219ENST00000531050 GDPD2Q9HCC8 539 aa9.28□□□□□ -0.92
PTPRK-219ENST00000531050 KNSTRNQ9Y448 316 aa9.28□□□□□ -0.92
PTPRK-219ENST00000531050 U2SURPO15042 1029 aaKnown RBP9.28□□□□□ -0.92
PTPRK-219ENST00000531050 ZRANB2O95218 330 aaKnown RBP eCLIP9.28□□□□□ -0.92
PTPRK-219ENST00000531050 SEMA3FQ13275 785 aa9.28□□□□□ -0.92
PTPRK-219ENST00000531050 TPD52L1Q16890 204 aaPredicted RBP9.28□□□□□ -0.92
PTPRK-219ENST00000531050 CCDC186Q7Z3E2 898 aa9.28□□□□□ -0.92
PTPRK-219ENST00000531050 USP48Q86UV5 1035 aa9.28□□□□□ -0.92
PTPRK-219ENST00000531050 TICAM2Q86XR7 235 aa9.28□□□□□ -0.92
PTPRK-219ENST00000531050 CDC45O75419 566 aa9.27□□□□□ -0.93
PTPRK-219ENST00000531050 MX1P20591 662 aa9.27□□□□□ -0.93
PTPRK-219ENST00000531050 MCTP2Q6DN12 878 aa9.27□□□□□ -0.93
PTPRK-219ENST00000531050 ZNF853P0CG23 659 aa9.27□□□□□ -0.93
PTPRK-219ENST00000531050 RNF20Q5VTR2 975 aa9.27□□□□□ -0.93
PTPRK-219ENST00000531050 ZSCAN25Q6NSZ9 544 aa9.27□□□□□ -0.93
PTPRK-219ENST00000531050 REXO1L1PQ8IX06 675 aa9.27□□□□□ -0.93
PTPRK-219ENST00000531050 DDX19BQ9UMR2 479 aa9.27□□□□□ -0.93
PTPRK-219ENST00000531050 SLU7O95391 586 aaKnown RBP9.26□□□□□ -0.93
PTPRK-219ENST00000531050 NOM1Q5C9Z4 860 aaKnown RBP9.26□□□□□ -0.93
PTPRK-219ENST00000531050 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.26□□□□□ -0.935e-7■■□□□ 13.3
PTPRK-219ENST00000531050 ZBTB40Q9NUA8 1239 aa9.26□□□□□ -0.93
PTPRK-219ENST00000531050 SYNMO15061 1565 aa9.26□□□□□ -0.93
PTPRK-219ENST00000531050 NPHP1O15259 732 aa9.26□□□□□ -0.93
PTPRK-219ENST00000531050 HTATSF1O43719 755 aaKnown RBP9.26□□□□□ -0.93
PTPRK-219ENST00000531050 ST18O60284 1047 aa9.26□□□□□ -0.93
PTPRK-219ENST00000531050 ATP6V1AP38606 617 aa9.26□□□□□ -0.93
PTPRK-219ENST00000531050 TMF1P82094 1093 aa9.26□□□□□ -0.93
PTPRK-219ENST00000531050 GPS2Q13227 327 aa9.26□□□□□ -0.93
PTPRK-219ENST00000531050 NYAP1Q6ZVC0 841 aa9.26□□□□□ -0.93
PTPRK-219ENST00000531050 ITPRIPQ8IWB1 547 aa9.26□□□□□ -0.93
PTPRK-219ENST00000531050 CFAP44Q96MT7 982 aa9.26□□□□□ -0.93
PTPRK-219ENST00000531050 ZCCHC17Q9NP64 241 aaKnown RBP9.26□□□□□ -0.93
PTPRK-219ENST00000531050 NRBP1Q9UHY1 535 aa9.26□□□□□ -0.93
PTPRK-219ENST00000531050 TRIM27P14373 513 aa9.25□□□□□ -0.93
PTPRK-219ENST00000531050 TRAPPC8Q9Y2L5 1435 aa9.25□□□□□ -0.93
PTPRK-219ENST00000531050 USP27XA6NNY8 438 aa9.25□□□□□ -0.93
PTPRK-219ENST00000531050 MAP2K2P36507 400 aa9.25□□□□□ -0.93
PTPRK-219ENST00000531050 ERCC6LQ2NKX8 1250 aa9.25□□□□□ -0.93
PTPRK-219ENST00000531050 TMEM87AQ8NBN3 555 aa9.25□□□□□ -0.93
PTPRK-219ENST00000531050 CEP89Q96ST8 783 aa9.25□□□□□ -0.93
PTPRK-219ENST00000531050 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.25□□□□□ -0.93
PTPRK-219ENST00000531050 ZFYVE16Q7Z3T8 1539 aa9.25□□□□□ -0.93
PTPRK-219ENST00000531050 ARAP3Q8WWN8 1544 aa9.25□□□□□ -0.93
PTPRK-219ENST00000531050 KANK1Q14678 1352 aa9.24□□□□□ -0.93
PTPRK-219ENST00000531050 ASXL1Q8IXJ9 1541 aa9.24□□□□□ -0.93
PTPRK-219ENST00000531050 EIF3CLB5ME19 914 aaKnown RBP9.24□□□□□ -0.93
PTPRK-219ENST00000531050 PPP1R12AO14974 1030 aaPredicted RBP9.24□□□□□ -0.93
PTPRK-219ENST00000531050 RGL3Q3MIN7 710 aa9.24□□□□□ -0.93
PTPRK-219ENST00000531050 FOXD4L6Q3SYB3 417 aaPredicted RBP9.24□□□□□ -0.93
PTPRK-219ENST00000531050 LRCH2Q5VUJ6 765 aa9.24□□□□□ -0.93
PTPRK-219ENST00000531050 FOXD4L3Q6VB84 417 aaPredicted RBP9.24□□□□□ -0.93
PTPRK-219ENST00000531050 EIF3CQ99613 913 aaKnown RBP9.24□□□□□ -0.93
PTPRK-219ENST00000531050 AATKQ6ZMQ8 1374 aa9.24□□□□□ -0.93
PTPRK-219ENST00000531050 OAS2P29728 719 aaKnown RBP9.24□□□□□ -0.93
PTPRK-219ENST00000531050 GIMAP6Q6P9H5 292 aa9.24□□□□□ -0.93
PTPRK-219ENST00000531050 MMS22LQ6ZRQ5 1243 aa9.24□□□□□ -0.93
PTPRK-219ENST00000531050 LRRN4CLQ8ND94 238 aa9.24□□□□□ -0.93
PTPRK-219ENST00000531050 ANKRD20A12PQ8NF67 263 aa9.24□□□□□ -0.93
PTPRK-219ENST00000531050 CACTINQ8WUQ7 758 aaKnown RBP9.24□□□□□ -0.93
PTPRK-219ENST00000531050 PLCD4Q9BRC7 762 aa9.24□□□□□ -0.93
PTPRK-219ENST00000531050 PSD3Q9NYI0 1048 aa9.24□□□□□ -0.93
PTPRK-219ENST00000531050 RRP7AQ9Y3A4 280 aaKnown RBP9.24□□□□□ -0.93
PTPRK-219ENST00000531050 CCDC171Q6TFL3 1326 aa9.23□□□□□ -0.93
PTPRK-219ENST00000531050 DEPDC5O75140 1603 aa9.23□□□□□ -0.93
PTPRK-219ENST00000531050 MADDQ8WXG6 1647 aa9.23□□□□□ -0.93
PTPRK-219ENST00000531050 CPP00450 1065 aa9.23□□□□□ -0.93
PTPRK-219ENST00000531050 GSPT1P15170 499 aaKnown RBP9.23□□□□□ -0.93
PTPRK-219ENST00000531050 ANKRD45Q5TZF3 282 aa9.23□□□□□ -0.93
PTPRK-219ENST00000531050 WDR63Q8IWG1 891 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms