RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 ITSN2Q9NZM3 1697 aa9.95□□□□□ -0.82
CTNND1-227ENST00000530748 BIVM-ERCC5R4GMW8 1640 aa9.95□□□□□ -0.82
CTNND1-227ENST00000530748 CAVIN4Q5BKX8 364 aa9.95□□□□□ -0.82
CTNND1-227ENST00000530748 LRPPRCP42704 1394 aaKnown RBP9.95□□□□□ -0.82
CTNND1-227ENST00000530748 ANKRD18AQ8IVF6 992 aa9.95□□□□□ -0.82
CTNND1-227ENST00000530748 IDH1O75874 414 aaKnown RBP9.95□□□□□ -0.82
CTNND1-227ENST00000530748 LEKR1Q6ZMV7 388 aa9.95□□□□□ -0.82
CTNND1-227ENST00000530748 PLB1Q6P1J6 1458 aa9.95□□□□□ -0.82
CTNND1-227ENST00000530748 MATR3P43243 847 aaKnown RBP eCLIP9.95□□□□□ -0.826e-7■■■■□ 22.1
CTNND1-227ENST00000530748 MIS18AQ9NYP9 233 aa9.95□□□□□ -0.82
CTNND1-227ENST00000530748 SEC63Q9UGP8 760 aaKnown RBP9.94□□□□□ -0.82
CTNND1-227ENST00000530748 ZPR1O75312 459 aa9.94□□□□□ -0.82
CTNND1-227ENST00000530748 GLRX3O76003 335 aaKnown RBP9.94□□□□□ -0.82
CTNND1-227ENST00000530748 ZC3H6P61129 1189 aaKnown RBP9.94□□□□□ -0.82
CTNND1-227ENST00000530748 WAPLQ7Z5K2 1190 aa9.94□□□□□ -0.82
CTNND1-227ENST00000530748 CCDC191Q8NCU4 936 aa9.94□□□□□ -0.82
CTNND1-227ENST00000530748 U3KPZ7 1027 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-227ENST00000530748 USP5P45974 858 aa9.94□□□□□ -0.82
CTNND1-227ENST00000530748 HSP90AB3PQ58FF7 597 aa9.94□□□□□ -0.82
CTNND1-227ENST00000530748 UPF3BQ9BZI7 483 aaKnown RBP9.94□□□□□ -0.82
CTNND1-227ENST00000530748 ERLIN1O75477 346 aa9.94□□□□□ -0.82
CTNND1-227ENST00000530748 PTPRCP08575 1304 aa9.94□□□□□ -0.82
CTNND1-227ENST00000530748 SLC5A1P13866 664 aa9.93□□□□□ -0.82
CTNND1-227ENST00000530748 DESP17661 470 aa9.93□□□□□ -0.82
CTNND1-227ENST00000530748 AXDND1Q5T1B0 1012 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-227ENST00000530748 TMOD2Q9NZR1 351 aa9.93□□□□□ -0.82
CTNND1-227ENST00000530748 H0YHG0 523 aa9.93□□□□□ -0.82
CTNND1-227ENST00000530748 ZRSR2Q15696 482 aaKnown RBP9.93□□□□□ -0.82
CTNND1-227ENST00000530748 SEPT11Q9NVA2 429 aaKnown RBP9.93□□□□□ -0.82
CTNND1-227ENST00000530748 TNIP1Q15025 636 aa9.93□□□□□ -0.82
CTNND1-227ENST00000530748 HYPKQ9NX55 129 aa9.93□□□□□ -0.82
CTNND1-227ENST00000530748 SMARCA5O60264 1052 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-227ENST00000530748 HMGB1P09429 215 aaKnown RBP9.93□□□□□ -0.82
CTNND1-227ENST00000530748 IFIT1P09914 478 aaKnown RBP9.93□□□□□ -0.82
CTNND1-227ENST00000530748 TTC21BQ7Z4L5 1316 aa9.92□□□□□ -0.82
CTNND1-227ENST00000530748 CCDC66A2RUB6 948 aa9.92□□□□□ -0.82
CTNND1-227ENST00000530748 PRPF40BQ6NWY9 871 aaKnown RBP9.92□□□□□ -0.82
CTNND1-227ENST00000530748 CCDC112Q8NEF3 446 aa9.92□□□□□ -0.82
CTNND1-227ENST00000530748 ZNF397Q8NF99 534 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-227ENST00000530748 PHAXQ9H814 394 aaKnown RBP9.92□□□□□ -0.82
CTNND1-227ENST00000530748 POLR3DP05423 398 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-227ENST00000530748 NOS1P29475 1434 aa9.92□□□□□ -0.82
CTNND1-227ENST00000530748 RARSP54136 660 aaKnown RBP9.92□□□□□ -0.82
CTNND1-227ENST00000530748 SEPT7Q16181 437 aaKnown RBP9.92□□□□□ -0.82
CTNND1-227ENST00000530748 MAP3K11Q16584 847 aa9.92□□□□□ -0.82
CTNND1-227ENST00000530748 JAKMIP3Q5VZ66 844 aa9.92□□□□□ -0.82
CTNND1-227ENST00000530748 WASLO00401 505 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-227ENST00000530748 SSBP05455 408 aaKnown RBP eCLIP9.92□□□□□ -0.821e-7■■■■■ 26.8
CTNND1-227ENST00000530748 NME9Q86XW9 330 aa9.92□□□□□ -0.82
CTNND1-227ENST00000530748 USHBP1Q8N6Y0 703 aa9.92□□□□□ -0.82
CTNND1-227ENST00000530748 RAPGEF6Q8TEU7 1601 aa9.92□□□□□ -0.82
CTNND1-227ENST00000530748 CCDC184Q52MB2 194 aa9.92□□□□□ -0.82
CTNND1-227ENST00000530748 PAF1Q8N7H5 531 aa9.92□□□□□ -0.82
CTNND1-227ENST00000530748 CCDC85AQ96PX6 553 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-227ENST00000530748 EXOC6BQ9Y2D4 811 aa9.92□□□□□ -0.82
CTNND1-227ENST00000530748 EIF3JO75822 258 aaKnown RBP9.91□□□□□ -0.82
CTNND1-227ENST00000530748 CCDC83Q8IWF9 413 aa9.91□□□□□ -0.82
CTNND1-227ENST00000530748 SH2B1Q9NRF2 756 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-227ENST00000530748 THOC2Q8NI27 1593 aaKnown RBP9.91□□□□□ -0.82
CTNND1-227ENST00000530748 PIBF1Q8WXW3 757 aa9.91□□□□□ -0.82
CTNND1-227ENST00000530748 TSG101Q99816 390 aa9.91□□□□□ -0.82
CTNND1-227ENST00000530748 DENND4BO75064 1496 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-227ENST00000530748 WDHD1O75717 1129 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-227ENST00000530748 FANCAO15360 1455 aa9.91□□□□□ -0.82
CTNND1-227ENST00000530748 TRIM21P19474 475 aaKnown RBP9.91□□□□□ -0.82
CTNND1-227ENST00000530748 KIAA1328Q86T90 577 aa9.91□□□□□ -0.82
CTNND1-227ENST00000530748 DDX11Q96FC9 970 aa9.91□□□□□ -0.82
CTNND1-227ENST00000530748 DHX29Q7Z478 1369 aaKnown RBP9.9□□□□□ -0.82
CTNND1-227ENST00000530748 ANKRD18BA2A2Z9 1011 aa9.9□□□□□ -0.82
CTNND1-227ENST00000530748 SSRP1Q08945 709 aaKnown RBP9.9□□□□□ -0.82
CTNND1-227ENST00000530748 CCDC148Q8NFR7 591 aa9.9□□□□□ -0.82
CTNND1-227ENST00000530748 DNAI2Q9GZS0 605 aa9.9□□□□□ -0.82
CTNND1-227ENST00000530748 ANKIB1Q9P2G1 1089 aa9.9□□□□□ -0.82
CTNND1-227ENST00000530748 ANKRD36BQ8N2N9 1353 aa9.9□□□□□ -0.82
CTNND1-227ENST00000530748 MAP3K12Q12852 859 aa9.9□□□□□ -0.82
CTNND1-227ENST00000530748 IFIT5Q13325 482 aaKnown RBP9.9□□□□□ -0.82
CTNND1-227ENST00000530748 DNAAF4Q8WXU2 420 aa9.9□□□□□ -0.82
CTNND1-227ENST00000530748 NEFHP12036 1026 aa9.9□□□□□ -0.82
CTNND1-227ENST00000530748 DZIP1Q86YF9 867 aaKnown RBP9.9□□□□□ -0.82
CTNND1-227ENST00000530748 SLF2Q8IX21 1173 aa9.9□□□□□ -0.82
CTNND1-227ENST00000530748 PHF8Q9UPP1 1060 aa9.9□□□□□ -0.82
CTNND1-227ENST00000530748 CCDC196A0A1B0GTZ2 297 aa9.9□□□□□ -0.83
CTNND1-227ENST00000530748 EPB41L2O43491 1005 aaKnown RBP9.9□□□□□ -0.83
CTNND1-227ENST00000530748 MCM4P33991 863 aa9.9□□□□□ -0.83
CTNND1-227ENST00000530748 EIF5P55010 431 aaKnown RBP9.9□□□□□ -0.83
CTNND1-227ENST00000530748 THUMPD2Q9BTF0 503 aaKnown RBP9.9□□□□□ -0.83
CTNND1-227ENST00000530748 EHMT1Q9H9B1 1298 aa9.9□□□□□ -0.83
CTNND1-227ENST00000530748 MKNK2Q9HBH9 465 aa9.9□□□□□ -0.83
CTNND1-227ENST00000530748 ABCF2Q9UG63 623 aa9.9□□□□□ -0.83
CTNND1-227ENST00000530748 PPP1R12BO60237 982 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-227ENST00000530748 CCDC183Q5T5S1 534 aa9.89□□□□□ -0.83
CTNND1-227ENST00000530748 CRACR2BQ8N4Y2 399 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-227ENST00000530748 TAF4BQ92750 862 aa9.89□□□□□ -0.83
CTNND1-227ENST00000530748 NAPBQ9H115 298 aa9.89□□□□□ -0.83
CTNND1-227ENST00000530748 POTEJP0CG39 1038 aa9.89□□□□□ -0.83
CTNND1-227ENST00000530748 GBP2P32456 591 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-227ENST00000530748 BOLA2Q9H3K6 86 aa9.89□□□□□ -0.83
CTNND1-227ENST00000530748 EIF2AK4Q9P2K8 1649 aaKnown RBP9.89□□□□□ -0.83
CTNND1-227ENST00000530748 SSH1Q8WYL5 1049 aa9.89□□□□□ -0.83
CTNND1-227ENST00000530748 BRPF3Q9ULD4 1205 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms