RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 REC8O95072 547 aa16.89■□□□□ 0.29
PCF11-204ENST00000530660 ZSCAN25Q6NSZ9 544 aa16.89■□□□□ 0.29
PCF11-204ENST00000530660 LUZP1Q86V48 1076 aa16.88■□□□□ 0.29
PCF11-204ENST00000530660 KCNG1Q9UIX4 513 aa16.88■□□□□ 0.29
PCF11-204ENST00000530660 CUL4AQ13619 759 aa16.88■□□□□ 0.29
PCF11-204ENST00000530660 MYO1CO00159 1063 aa16.88■□□□□ 0.29
PCF11-204ENST00000530660 KIAA1210Q9ULL0 1709 aa16.88■□□□□ 0.29
PCF11-204ENST00000530660 UGGT1Q9NYU2 1555 aa16.87■□□□□ 0.29
PCF11-204ENST00000530660 ERBB3P21860 1342 aa16.87■□□□□ 0.29
PCF11-204ENST00000530660 FAM193AP78312 1265 aa16.87■□□□□ 0.29
PCF11-204ENST00000530660 FHOD1Q9Y613 1164 aa16.87■□□□□ 0.29
PCF11-204ENST00000530660 CREBRFQ8IUR6 639 aa16.87■□□□□ 0.29
PCF11-204ENST00000530660 CACTINQ8WUQ7 758 aaKnown RBP16.87■□□□□ 0.29
PCF11-204ENST00000530660 PLEKHF1Q96S99 279 aa16.87■□□□□ 0.29
PCF11-204ENST00000530660 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.87■□□□□ 0.29
PCF11-204ENST00000530660 ST5P78524 1137 aa16.86■□□□□ 0.29
PCF11-204ENST00000530660 DTNBO60941 627 aa16.86■□□□□ 0.29
PCF11-204ENST00000530660 CASC1Q6TDU7 716 aa16.86■□□□□ 0.29
PCF11-204ENST00000530660 PALD1Q9ULE6 856 aa16.86■□□□□ 0.29
PCF11-204ENST00000530660 TRAPPC8Q9Y2L5 1435 aa16.86■□□□□ 0.29
PCF11-204ENST00000530660 ADGRB2O60241 1585 aa16.86■□□□□ 0.29
PCF11-204ENST00000530660 UBE2HP62256 183 aa16.86■□□□□ 0.29
PCF11-204ENST00000530660 BMS1Q14692 1282 aaKnown RBP16.86■□□□□ 0.29
PCF11-204ENST00000530660 UPF3BQ9BZI7 483 aaKnown RBP16.86■□□□□ 0.29
PCF11-204ENST00000530660 MAP3K4Q9Y6R4 1608 aa16.85■□□□□ 0.29
PCF11-204ENST00000530660 PLA2G4AP47712 749 aa16.85■□□□□ 0.29
PCF11-204ENST00000530660 NCBP3Q53F19 620 aaKnown RBP16.85■□□□□ 0.29
PCF11-204ENST00000530660 ICE2Q659A1 982 aa16.85■□□□□ 0.29
PCF11-204ENST00000530660 EXOC6BQ9Y2D4 811 aa16.85■□□□□ 0.29
PCF11-204ENST00000530660 WDR33Q9C0J8 1336 aaKnown RBP16.85■□□□□ 0.29
PCF11-204ENST00000530660 ABCC11Q96J66 1382 aa16.85■□□□□ 0.29
PCF11-204ENST00000530660 ERCC6LQ2NKX8 1250 aa16.85■□□□□ 0.29
PCF11-204ENST00000530660 ERC2O15083 957 aa16.84■□□□□ 0.29
PCF11-204ENST00000530660 CHMP3Q9Y3E7 222 aa16.84■□□□□ 0.29
PCF11-204ENST00000530660 CASQ1P31415 396 aa16.84■□□□□ 0.29
PCF11-204ENST00000530660 AFAP1Q8N556 730 aa16.84■□□□□ 0.29
PCF11-204ENST00000530660 CCDC191Q8NCU4 936 aa16.84■□□□□ 0.29
PCF11-204ENST00000530660 ERO1AQ96HE7 468 aa16.84■□□□□ 0.29
PCF11-204ENST00000530660 LRRFIP2Q9Y608 721 aaKnown RBP16.84■□□□□ 0.29
PCF11-204ENST00000530660 SBNO2Q9Y2G9 1366 aa16.84■□□□□ 0.29
PCF11-204ENST00000530660 ARID5BQ14865 1188 aa16.83■□□□□ 0.29
PCF11-204ENST00000530660 TMEM132EQ6IEE7 984 aa16.83■□□□□ 0.29
PCF11-204ENST00000530660 GPATCH11Q8N954 259 aa16.83■□□□□ 0.29
PCF11-204ENST00000530660 TMEM87AQ8NBN3 555 aa16.83■□□□□ 0.29
PCF11-204ENST00000530660 SMARCE1Q969G3 411 aa16.83■□□□□ 0.29
PCF11-204ENST00000530660 TRIM5Q9C035 493 aa16.83■□□□□ 0.29
PCF11-204ENST00000530660 ZCCHC17Q9NP64 241 aaKnown RBP16.83■□□□□ 0.29
PCF11-204ENST00000530660 TRMT1Q9NXH9 659 aaKnown RBP16.83■□□□□ 0.29
PCF11-204ENST00000530660 PTPRCP08575 1304 aa16.83■□□□□ 0.29
PCF11-204ENST00000530660 PNMA6AP0CW24 399 aaPredicted RBP16.83■□□□□ 0.28
PCF11-204ENST00000530660 CCDC144BQ3MJ40 725 aa16.83■□□□□ 0.28
PCF11-204ENST00000530660 CCDC144CPQ8IYA2 1237 aa16.83■□□□□ 0.28
PCF11-204ENST00000530660 LRRN4CLQ8ND94 238 aa16.83■□□□□ 0.28
PCF11-204ENST00000530660 CFAP44Q96MT7 982 aa16.83■□□□□ 0.28
PCF11-204ENST00000530660 INTS4Q96HW7 963 aaKnown RBP16.83■□□□□ 0.28
PCF11-204ENST00000530660 CCDC192P0DO97 292 aa16.82■□□□□ 0.28
PCF11-204ENST00000530660 CLCN6P51797 869 aa16.82■□□□□ 0.28
PCF11-204ENST00000530660 MED14O60244 1454 aa16.82■□□□□ 0.28
PCF11-204ENST00000530660 ADGRL1O94910 1474 aa16.82■□□□□ 0.28
PCF11-204ENST00000530660 CAMK4Q16566 473 aa16.82■□□□□ 0.28
PCF11-204ENST00000530660 SLFNL1Q499Z3 407 aa16.82■□□□□ 0.28
PCF11-204ENST00000530660 RPAP1Q9BWH6 1393 aaPredicted RBP16.82■□□□□ 0.28
PCF11-204ENST00000530660 PTPN14Q15678 1187 aa16.81■□□□□ 0.28
PCF11-204ENST00000530660 MUM1L1Q5H9M0 696 aa16.81■□□□□ 0.28
PCF11-204ENST00000530660 ELL2O00472 640 aaPredicted RBP16.81■□□□□ 0.28
PCF11-204ENST00000530660 CLGNO14967 610 aa16.81■□□□□ 0.28
PCF11-204ENST00000530660 ZSCAN26Q16670 478 aa16.81■□□□□ 0.28
PCF11-204ENST00000530660 FAM200AQ8TCP9 573 aa16.81■□□□□ 0.28
PCF11-204ENST00000530660 CHGAP10645 457 aaKnown RBP16.81■□□□□ 0.28
PCF11-204ENST00000530660 SLU7O95391 586 aaKnown RBP16.8■□□□□ 0.28
PCF11-204ENST00000530660 H2AFXP16104 143 aaPredicted RBP16.8■□□□□ 0.28
PCF11-204ENST00000530660 TXLNBQ8N3L3 684 aa16.8■□□□□ 0.28
PCF11-204ENST00000530660 MYCBPQ99417 103 aaPredicted RBP16.8■□□□□ 0.28
PCF11-204ENST00000530660 MCM2P49736 904 aa16.8■□□□□ 0.28
PCF11-204ENST00000530660 TEX35Q5T0J7 233 aa16.8■□□□□ 0.28
PCF11-204ENST00000530660 LARP6Q9BRS8 491 aaKnown RBP16.8■□□□□ 0.28
PCF11-204ENST00000530660 MYOM2P54296 1465 aa16.8■□□□□ 0.28
PCF11-204ENST00000530660 EFCAB2Q5VUJ9 269 aa16.8■□□□□ 0.28
PCF11-204ENST00000530660 SYTL4Q96C24 671 aaPredicted RBP16.8■□□□□ 0.28
PCF11-204ENST00000530660 DRC1Q96MC2 740 aa16.8■□□□□ 0.28
PCF11-204ENST00000530660 NCAPGQ9BPX3 1015 aa16.8■□□□□ 0.28
PCF11-204ENST00000530660 ATG3Q9NT62 314 aa16.8■□□□□ 0.28
PCF11-204ENST00000530660 ALDH1L2Q3SY69 923 aa16.79■□□□□ 0.28
PCF11-204ENST00000530660 CT47A1Q5JQC4 288 aaPredicted RBP16.79■□□□□ 0.28
PCF11-204ENST00000530660 DCTPP1Q9H773 170 aa16.79■□□□□ 0.28
PCF11-204ENST00000530660 PPRC1Q5VV67 1664 aaKnown RBP16.79■□□□□ 0.28
PCF11-204ENST00000530660 MYO3AQ8NEV4 1616 aa16.79■□□□□ 0.28
PCF11-204ENST00000530660 ZNF75DP51815 510 aa16.79■□□□□ 0.28
PCF11-204ENST00000530660 SART3Q15020 963 aaKnown RBP16.79■□□□□ 0.28
PCF11-204ENST00000530660 MRVI1Q9Y6F6 885 aa16.79■□□□□ 0.28
PCF11-204ENST00000530660 IL16Q14005 1332 aa16.79■□□□□ 0.28
PCF11-204ENST00000530660 CKAP2LQ8IYA6 745 aa16.78■□□□□ 0.28
PCF11-204ENST00000530660 CLIP2Q9UDT6 1046 aa16.78■□□□□ 0.28
PCF11-204ENST00000530660 NYAP1Q6ZVC0 841 aa16.78■□□□□ 0.28
PCF11-204ENST00000530660 GGNBP2Q9H3C7 697 aa16.78■□□□□ 0.28
PCF11-204ENST00000530660 KIF3BO15066 747 aa16.78■□□□□ 0.28
PCF11-204ENST00000530660 LMOD3Q0VAK6 560 aa16.78■□□□□ 0.28
PCF11-204ENST00000530660 CBX8Q9HC52 389 aa16.78■□□□□ 0.28
PCF11-204ENST00000530660 ZSCAN22P10073 491 aaPredicted RBP16.77■□□□□ 0.28
PCF11-204ENST00000530660 GUCY2CP25092 1073 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms