RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 LMOD2Q6P5Q4 547 aa10.06□□□□□ -0.8
ITGB1-218ENST00000528877 ABCC6O95255 1503 aa10.06□□□□□ -0.8
ITGB1-218ENST00000528877 KIAA0232Q92628 1395 aa10.05□□□□□ -0.8
ITGB1-218ENST00000528877 FAM83GA6ND36 823 aa10.05□□□□□ -0.8
ITGB1-218ENST00000528877 ONECUT3O60422 494 aaPredicted RBP10.05□□□□□ -0.8
ITGB1-218ENST00000528877 ZBED2Q9BTP6 218 aa10.05□□□□□ -0.8
ITGB1-218ENST00000528877 VPS9D1Q9Y2B5 631 aa10.05□□□□□ -0.8
ITGB1-218ENST00000528877 CD163L1Q9NR16 1453 aa10.04□□□□□ -0.8
ITGB1-218ENST00000528877 CARD11Q9BXL7 1154 aa10.04□□□□□ -0.8
ITGB1-218ENST00000528877 BRWD3Q6RI45 1802 aa10.03□□□□□ -0.8
ITGB1-218ENST00000528877 HRO43593 1189 aa10.03□□□□□ -0.8
ITGB1-218ENST00000528877 PUS7Q96PZ0 661 aaKnown RBP10.03□□□□□ -0.8
ITGB1-218ENST00000528877 NBPF3Q9H094 633 aa10.03□□□□□ -0.8
ITGB1-218ENST00000528877 PRDM11Q9NQV5 511 aa10.03□□□□□ -0.8
ITGB1-218ENST00000528877 CABP1Q9NZU7 370 aa10.03□□□□□ -0.8
ITGB1-218ENST00000528877 NFAT5O94916 1531 aa10.02□□□□□ -0.8
ITGB1-218ENST00000528877 NINLQ9Y2I6 1382 aa10.02□□□□□ -0.8
ITGB1-218ENST00000528877 BTG4Q9NY30 223 aa10.02□□□□□ -0.81
ITGB1-218ENST00000528877 TIMELESSQ9UNS1 1208 aa10.02□□□□□ -0.81
ITGB1-218ENST00000528877 SRCAPQ6ZRS2 3230 aa10.02□□□□□ -0.81
ITGB1-218ENST00000528877 CAMTA1Q9Y6Y1 1673 aa10.02□□□□□ -0.81
ITGB1-218ENST00000528877 SPATA31A5Q5VU36 1347 aa10.02□□□□□ -0.81
ITGB1-218ENST00000528877 SPATA31A7Q8IWB4 1347 aa10.02□□□□□ -0.81
ITGB1-218ENST00000528877 TTC21AQ8NDW8 1320 aa10.02□□□□□ -0.81
ITGB1-218ENST00000528877 BLMP54132 1417 aaPredicted RBP10.01□□□□□ -0.81
ITGB1-218ENST00000528877 NLRP13Q86W25 1043 aa10.01□□□□□ -0.81
ITGB1-218ENST00000528877 ABTB2Q8N961 1025 aa10.01□□□□□ -0.81
ITGB1-218ENST00000528877 COL5A2P05997 1499 aaPredicted RBP10.01□□□□□ -0.81
ITGB1-218ENST00000528877 COL18A1P39060 1754 aa10.01□□□□□ -0.81
ITGB1-218ENST00000528877 AATKQ6ZMQ8 1374 aa10.01□□□□□ -0.81
ITGB1-218ENST00000528877 OSBPP22059 807 aa10□□□□□ -0.81
ITGB1-218ENST00000528877 CCDC125Q86Z20 511 aa10□□□□□ -0.81
ITGB1-218ENST00000528877 TESK2Q96S53 571 aa10□□□□□ -0.81
ITGB1-218ENST00000528877 RABGEF1Q9UJ41 708 aa10□□□□□ -0.81
ITGB1-218ENST00000528877 USP31Q70CQ4 1352 aa10□□□□□ -0.81
ITGB1-218ENST00000528877 EDC4Q6P2E9 1401 aaKnown RBP9.99□□□□□ -0.81
ITGB1-218ENST00000528877 PARP4Q9UKK3 1724 aaKnown RBP9.99□□□□□ -0.81
ITGB1-218ENST00000528877 SLC24A1O60721 1099 aa9.99□□□□□ -0.81
ITGB1-218ENST00000528877 GCP02774 474 aa9.99□□□□□ -0.81
ITGB1-218ENST00000528877 SMYD5Q6GMV2 418 aa9.99□□□□□ -0.81
ITGB1-218ENST00000528877 SEPT12Q8IYM1 358 aa9.99□□□□□ -0.81
ITGB1-218ENST00000528877 SPATA31A1Q5TZJ5 1347 aa9.99□□□□□ -0.81
ITGB1-218ENST00000528877 TTC21BQ7Z4L5 1316 aa9.99□□□□□ -0.81
ITGB1-218ENST00000528877 KTN1Q86UP2 1357 aaKnown RBP9.99□□□□□ -0.81
ITGB1-218ENST00000528877 USP47Q96K76 1375 aa9.99□□□□□ -0.81
ITGB1-218ENST00000528877 WNK3Q9BYP7 1800 aa9.98□□□□□ -0.81
ITGB1-218ENST00000528877 COL9A1P20849 921 aa9.98□□□□□ -0.81
ITGB1-218ENST00000528877 NUTM2GQ5VZR2 741 aa9.98□□□□□ -0.81
ITGB1-218ENST00000528877 A0A1W2PP64 1363 aa9.98□□□□□ -0.81
ITGB1-218ENST00000528877 OVOS2A0A0J9YW53 1432 aa9.98□□□□□ -0.81
ITGB1-218ENST00000528877 DISP2A7MBM2 1401 aa9.98□□□□□ -0.81
ITGB1-218ENST00000528877 OVOS2Q6IE36 1432 aa9.98□□□□□ -0.81
ITGB1-218ENST00000528877 RGPD1P0DJD0 1748 aa9.97□□□□□ -0.81
ITGB1-218ENST00000528877 TNS1Q9HBL0 1735 aaKnown RBP9.97□□□□□ -0.81
ITGB1-218ENST00000528877 HCSTQ9UBK5 93 aa9.97□□□□□ -0.81
ITGB1-218ENST00000528877 BHMG1C9JSJ3 638 aaPredicted RBP9.96□□□□□ -0.82
ITGB1-218ENST00000528877 ZC3H6P61129 1189 aaKnown RBP9.96□□□□□ -0.82
ITGB1-218ENST00000528877 CHRNA2Q15822 529 aa9.96□□□□□ -0.82
ITGB1-218ENST00000528877 FAM98CQ17RN3 349 aaKnown RBP9.96□□□□□ -0.82
ITGB1-218ENST00000528877 TSR1Q2NL82 804 aaKnown RBP9.96□□□□□ -0.82
ITGB1-218ENST00000528877 BARGINQ6ZT62 677 aa9.96□□□□□ -0.82
ITGB1-218ENST00000528877 KRT27Q7Z3Y8 459 aa9.96□□□□□ -0.82
ITGB1-218ENST00000528877 MRPL50Q8N5N7 158 aaKnown RBP9.96□□□□□ -0.82
ITGB1-218ENST00000528877 KCNH5Q8NCM2 988 aa9.96□□□□□ -0.82
ITGB1-218ENST00000528877 RBM27Q9P2N5 1060 aaKnown RBP9.96□□□□□ -0.82
ITGB1-218ENST00000528877 CCDC9Q9Y3X0 531 aaKnown RBP9.96□□□□□ -0.82
ITGB1-218ENST00000528877 CRB1P82279 1406 aa9.96□□□□□ -0.82
ITGB1-218ENST00000528877 LRRC37A3O60309 1634 aa9.96□□□□□ -0.82
ITGB1-218ENST00000528877 ST20-MTHFSA0A0A6YYL1 179 aa9.95□□□□□ -0.82
ITGB1-218ENST00000528877 TRIM6-TRIM34B2RNG4 842 aa9.95□□□□□ -0.82
ITGB1-218ENST00000528877 LAPTM4BQ86VI4 370 aa9.95□□□□□ -0.82
ITGB1-218ENST00000528877 THRAP3Q9Y2W1 955 aaKnown RBP9.95□□□□□ -0.82
ITGB1-218ENST00000528877 MYOM1P52179 1685 aa9.95□□□□□ -0.82
ITGB1-218ENST00000528877 ANKRD36BQ8N2N9 1353 aa9.94□□□□□ -0.82
ITGB1-218ENST00000528877 GOLGA8CPA6NN73 597 aa9.94□□□□□ -0.82
ITGB1-218ENST00000528877 MLLT3P42568 568 aaPredicted RBP9.94□□□□□ -0.82
ITGB1-218ENST00000528877 PACS2Q86VP3 889 aa9.94□□□□□ -0.82
ITGB1-218ENST00000528877 ARHGEF25Q86VW2 580 aa9.94□□□□□ -0.82
ITGB1-218ENST00000528877 PEAK1Q9H792 1746 aa9.93□□□□□ -0.82
ITGB1-218ENST00000528877 SEMA3EO15041 775 aa9.93□□□□□ -0.82
ITGB1-218ENST00000528877 PROX2Q3B8N5 592 aa9.93□□□□□ -0.82
ITGB1-218ENST00000528877 LARP1Q6PKG0 1096 aaKnown RBP9.93□□□□□ -0.82
ITGB1-218ENST00000528877 HDGFL2Q7Z4V5 671 aaPredicted RBP9.93□□□□□ -0.82
ITGB1-218ENST00000528877 TERF2IPQ9NYB0 399 aa9.93□□□□□ -0.82
ITGB1-218ENST00000528877 LTN1O94822 1766 aa9.93□□□□□ -0.82
ITGB1-218ENST00000528877 WDR17Q8IZU2 1322 aa9.92□□□□□ -0.82
ITGB1-218ENST00000528877 TESPA1A2RU30 521 aaPredicted RBP9.92□□□□□ -0.82
ITGB1-218ENST00000528877 TULP1O00294 542 aaPredicted RBP9.92□□□□□ -0.82
ITGB1-218ENST00000528877 RGS20O76081 388 aa9.92□□□□□ -0.82
ITGB1-218ENST00000528877 PRSS12P56730 875 aa9.92□□□□□ -0.82
ITGB1-218ENST00000528877 TCP11L2Q8N4U5 519 aa9.92□□□□□ -0.82
ITGB1-218ENST00000528877 SLC12A5Q9H2X9 1139 aa9.92□□□□□ -0.82
ITGB1-218ENST00000528877 STRN4Q9NRL3 753 aa9.92□□□□□ -0.82
ITGB1-218ENST00000528877 RGPD3A6NKT7 1758 aaPredicted RBP9.92□□□□□ -0.82
ITGB1-218ENST00000528877 RGPD4Q7Z3J3 1758 aa9.92□□□□□ -0.82
ITGB1-218ENST00000528877 FAM208AQ9UK61 1670 aaKnown RBP9.92□□□□□ -0.82
ITGB1-218ENST00000528877 BCL9O00512 1426 aa9.91□□□□□ -0.82
ITGB1-218ENST00000528877 PRIM1P49642 420 aaKnown RBP9.91□□□□□ -0.82
ITGB1-218ENST00000528877 TMF1P82094 1093 aa9.91□□□□□ -0.82
ITGB1-218ENST00000528877 KIAA1468Q9P260 1216 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms