RNA–Protein interactions for RNA: ENST00000527954.1

EXOSC4-203, Transcript of exosome component 4, humanhuman

TSL 2

Gene EXOSC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-203ENST00000527954 DCAF5Q96JK2 942 aa20.64■□□□□ 0.89
EXOSC4-203ENST00000527954 MTHFSP49914 203 aa20.63■□□□□ 0.89
EXOSC4-203ENST00000527954 CC2D1BQ5T0F9 858 aaKnown RBP20.63■□□□□ 0.89
EXOSC4-203ENST00000527954 NLGN2Q8NFZ4 835 aa20.63■□□□□ 0.89
EXOSC4-203ENST00000527954 GPR162Q16538 588 aa20.62■□□□□ 0.89
EXOSC4-203ENST00000527954 KDM6AO15550 1401 aaPredicted RBP20.61■□□□□ 0.89
EXOSC4-203ENST00000527954 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.61■□□□□ 0.89
EXOSC4-203ENST00000527954 CABP4P57796 275 aa20.61■□□□□ 0.89
EXOSC4-203ENST00000527954 CNGB1Q14028 1251 aaPredicted RBP20.61■□□□□ 0.89
EXOSC4-203ENST00000527954 C1orf141Q5JVX7 400 aa20.61■□□□□ 0.89
EXOSC4-203ENST00000527954 PELP1Q8IZL8 1130 aaKnown RBP20.61■□□□□ 0.89
EXOSC4-203ENST00000527954 KDRP35968 1356 aa20.6■□□□□ 0.89
EXOSC4-203ENST00000527954 RBM42Q9BTD8 480 aaKnown RBP20.6■□□□□ 0.89
EXOSC4-203ENST00000527954 GNPATO15228 680 aa20.59■□□□□ 0.89
EXOSC4-203ENST00000527954 SSFA2P28290 1259 aa20.59■□□□□ 0.89
EXOSC4-203ENST00000527954 SLC4A9Q96Q91 983 aa20.59■□□□□ 0.89
EXOSC4-203ENST00000527954 HMOX1P09601 288 aa20.57■□□□□ 0.88
EXOSC4-203ENST00000527954 UBR3Q6ZT12 1888 aa20.56■□□□□ 0.88
EXOSC4-203ENST00000527954 NFATC2IPQ8NCF5 419 aa20.56■□□□□ 0.88
EXOSC4-203ENST00000527954 DIAPH1O60610 1272 aaKnown RBP20.55■□□□□ 0.88
EXOSC4-203ENST00000527954 PTCD1O75127 700 aaKnown RBP20.53■□□□□ 0.88
EXOSC4-203ENST00000527954 AKAP4Q5JQC9 854 aa20.53■□□□□ 0.88
EXOSC4-203ENST00000527954 CD2APQ9Y5K6 639 aa20.53■□□□□ 0.88
EXOSC4-203ENST00000527954 UTRNP46939 3433 aa20.52■□□□□ 0.88
EXOSC4-203ENST00000527954 NPC1L1Q9UHC9 1359 aa20.52■□□□□ 0.88
EXOSC4-203ENST00000527954 ZNF784Q8NCA9 323 aaPredicted RBP20.52■□□□□ 0.88
EXOSC4-203ENST00000527954 RTCBQ9Y3I0 505 aaKnown RBP20.52■□□□□ 0.88
EXOSC4-203ENST00000527954 YBX3P16989 372 aaKnown RBP eCLIP20.51■□□□□ 0.87
EXOSC4-203ENST00000527954 TRAPPC3LQ5T215 181 aa20.51■□□□□ 0.87
EXOSC4-203ENST00000527954 LGR6Q9HBX8 967 aa20.51■□□□□ 0.87
EXOSC4-203ENST00000527954 RC3H1Q5TC82 1133 aaKnown RBP20.5■□□□□ 0.87
EXOSC4-203ENST00000527954 MTHFSDQ2M296 383 aaKnown RBP20.49■□□□□ 0.87
EXOSC4-203ENST00000527954 CNTNAP4Q9C0A0 1308 aa20.49■□□□□ 0.87
EXOSC4-203ENST00000527954 ZNF831Q5JPB2 1677 aa20.48■□□□□ 0.87
EXOSC4-203ENST00000527954 RNMTO43148 476 aaKnown RBP20.48■□□□□ 0.87
EXOSC4-203ENST00000527954 RPS6KA4O75676 772 aa20.48■□□□□ 0.87
EXOSC4-203ENST00000527954 ARHGEF1Q92888 912 aaKnown RBP20.48■□□□□ 0.87
EXOSC4-203ENST00000527954 SLC52A2Q9HAB3 445 aa20.48■□□□□ 0.87
EXOSC4-203ENST00000527954 U2SURPO15042 1029 aaKnown RBP20.47■□□□□ 0.87
EXOSC4-203ENST00000527954 GRIN3BO60391 1043 aa20.47■□□□□ 0.87
EXOSC4-203ENST00000527954 COL3A1P02461 1466 aaPredicted RBP20.46■□□□□ 0.87
EXOSC4-203ENST00000527954 MMP10P09238 476 aa20.46■□□□□ 0.87
EXOSC4-203ENST00000527954 ADRA2BP18089 450 aa20.46■□□□□ 0.87
EXOSC4-203ENST00000527954 COL5A3P25940 1745 aaPredicted RBP20.45■□□□□ 0.86
EXOSC4-203ENST00000527954 SCN11AQ9UI33 1791 aa20.45■□□□□ 0.86
EXOSC4-203ENST00000527954 CRKLP46109 303 aaKnown RBP20.45■□□□□ 0.86
EXOSC4-203ENST00000527954 CHD4Q14839 1912 aa20.45■□□□□ 0.86
EXOSC4-203ENST00000527954 RFC4P35249 363 aa20.44■□□□□ 0.86
EXOSC4-203ENST00000527954 SLC39A6Q13433 755 aa20.44■□□□□ 0.86
EXOSC4-203ENST00000527954 NLGN1Q8N2Q7 840 aa20.44■□□□□ 0.86
EXOSC4-203ENST00000527954 WWC3Q9ULE0 1092 aa20.44■□□□□ 0.86
EXOSC4-203ENST00000527954 GYS1P13807 737 aa20.43■□□□□ 0.86
EXOSC4-203ENST00000527954 DNAJC10Q8IXB1 793 aa20.42■□□□□ 0.86
EXOSC4-203ENST00000527954 MRC1P22897 1456 aa20.41■□□□□ 0.86
EXOSC4-203ENST00000527954 GOLGB1Q14789 3259 aaKnown RBP20.4■□□□□ 0.86
EXOSC4-203ENST00000527954 TJP1Q07157 1748 aa20.4■□□□□ 0.86
EXOSC4-203ENST00000527954 INTS5Q6P9B9 1019 aaKnown RBP20.4■□□□□ 0.86
EXOSC4-203ENST00000527954 CFAP53Q96M91 514 aa20.4■□□□□ 0.86
EXOSC4-203ENST00000527954 SRP68Q9UHB9 627 aaKnown RBP20.4■□□□□ 0.86
EXOSC4-203ENST00000527954 MYH14Q7Z406 1995 aaKnown RBP20.39■□□□□ 0.85
EXOSC4-203ENST00000527954 CCDC87Q9NVE4 849 aa20.38■□□□□ 0.85
EXOSC4-203ENST00000527954 CYP19A1P11511 503 aaPredicted RBP20.37■□□□□ 0.85
EXOSC4-203ENST00000527954 PPP2R1AP30153 589 aa20.37■□□□□ 0.85
EXOSC4-203ENST00000527954 GAS2L2Q8NHY3 880 aa20.37■□□□□ 0.85
EXOSC4-203ENST00000527954 PARP3Q9Y6F1 533 aa20.37■□□□□ 0.85
EXOSC4-203ENST00000527954 ADAMTS7Q9UKP4 1686 aa20.37■□□□□ 0.85
EXOSC4-203ENST00000527954 CICQ96RK0 1608 aaPredicted RBP20.37■□□□□ 0.85
EXOSC4-203ENST00000527954 USP42Q9H9J4 1324 aaKnown RBP20.36■□□□□ 0.85
EXOSC4-203ENST00000527954 GNAT3A8MTJ3 354 aa20.36■□□□□ 0.85
EXOSC4-203ENST00000527954 IL17REQ8NFR9 667 aa20.36■□□□□ 0.85
EXOSC4-203ENST00000527954 KCPQ6ZWJ8 1503 aa20.36■□□□□ 0.85
EXOSC4-203ENST00000527954 PRKAR2BP31323 418 aa20.35■□□□□ 0.85
EXOSC4-203ENST00000527954 FKBP8Q14318 412 aa20.35■□□□□ 0.85
EXOSC4-203ENST00000527954 PHACTR3Q96KR7 559 aa20.35■□□□□ 0.85
EXOSC4-203ENST00000527954 C4AP0C0L4 1744 aa20.35■□□□□ 0.85
EXOSC4-203ENST00000527954 A0A0G2JLW4 131 aa20.34■□□□□ 0.85
EXOSC4-203ENST00000527954 TGFB2P61812 414 aa20.34■□□□□ 0.85
EXOSC4-203ENST00000527954 TEFQ10587 303 aa20.34■□□□□ 0.85
EXOSC4-203ENST00000527954 TTC5Q8N0Z6 440 aa20.34■□□□□ 0.85
EXOSC4-203ENST00000527954 RSPH6AQ9H0K4 717 aa20.34■□□□□ 0.85
EXOSC4-203ENST00000527954 NUDCQ9Y266 331 aa20.34■□□□□ 0.85
EXOSC4-203ENST00000527954 PXDNLA1KZ92 1463 aa20.34■□□□□ 0.85
EXOSC4-203ENST00000527954 SOS1Q07889 1333 aaPredicted RBP20.33■□□□□ 0.85
EXOSC4-203ENST00000527954 VSIG10Q8N0Z9 540 aa20.33■□□□□ 0.85
EXOSC4-203ENST00000527954 C10orf71Q711Q0 1435 aa20.33■□□□□ 0.84
EXOSC4-203ENST00000527954 VIRMAQ69YN4 1812 aaKnown RBP20.32■□□□□ 0.84
EXOSC4-203ENST00000527954 U2AF1L5P0DN76 240 aaPredicted RBP20.32■□□□□ 0.84
EXOSC4-203ENST00000527954 U2AF1Q01081 240 aaKnown RBP eCLIP20.32■□□□□ 0.84
EXOSC4-203ENST00000527954 USPL1Q5W0Q7 1092 aa20.32■□□□□ 0.84
EXOSC4-203ENST00000527954 ZBTB1Q9Y2K1 713 aa20.32■□□□□ 0.84
EXOSC4-203ENST00000527954 ZPR1O75312 459 aa20.31■□□□□ 0.84
EXOSC4-203ENST00000527954 DDR1Q08345 913 aa20.31■□□□□ 0.84
EXOSC4-203ENST00000527954 DPEP1P16444 411 aa20.3■□□□□ 0.84
EXOSC4-203ENST00000527954 ZNF496Q96IT1 587 aaPredicted RBP20.3■□□□□ 0.84
EXOSC4-203ENST00000527954 BCS1LQ9Y276 419 aa20.3■□□□□ 0.84
EXOSC4-203ENST00000527954 CANXP27824 592 aaKnown RBP20.29■□□□□ 0.84
EXOSC4-203ENST00000527954 TM4SF1P30408 202 aa20.29■□□□□ 0.84
EXOSC4-203ENST00000527954 C1QTNF8P60827 252 aa20.29■□□□□ 0.84
EXOSC4-203ENST00000527954 ZNF790Q6PG37 636 aa20.29■□□□□ 0.84
EXOSC4-203ENST00000527954 KIAA1551Q9HCM1 1747 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms