RNA–Protein interactions for RNA: ENST00000526938.5

CTNND1-215, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-215ENST00000526938 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.65□□□□□ -0.71
CTNND1-215ENST00000526938 UBR1Q8IWV7 1749 aa10.64□□□□□ -0.71
CTNND1-215ENST00000526938 PNMA6EA0A0J9YXQ4 647 aa10.64□□□□□ -0.71
CTNND1-215ENST00000526938 PRAMEF22A3QJZ6 481 aa10.64□□□□□ -0.71
CTNND1-215ENST00000526938 NUTM1Q86Y26 1132 aa10.64□□□□□ -0.71
CTNND1-215ENST00000526938 STRN4Q9NRL3 753 aa10.64□□□□□ -0.71
CTNND1-215ENST00000526938 SRGAP3O43295 1099 aa10.64□□□□□ -0.71
CTNND1-215ENST00000526938 JARID2Q92833 1246 aaPredicted RBP10.64□□□□□ -0.71
CTNND1-215ENST00000526938 CCDC9Q9Y3X0 531 aaKnown RBP10.63□□□□□ -0.71
CTNND1-215ENST00000526938 PTCH1Q13635 1447 aa10.63□□□□□ -0.71
CTNND1-215ENST00000526938 HTATSF1O43719 755 aaKnown RBP10.63□□□□□ -0.71
CTNND1-215ENST00000526938 NPHP4O75161 1426 aaPredicted RBP10.63□□□□□ -0.71
CTNND1-215ENST00000526938 TATP17735 454 aaPredicted RBP10.63□□□□□ -0.71
CTNND1-215ENST00000526938 TPRNQ4KMQ1 711 aa10.63□□□□□ -0.71
CTNND1-215ENST00000526938 ARHGEF25Q86VW2 580 aa10.63□□□□□ -0.71
CTNND1-215ENST00000526938 LRRCC1Q9C099 1032 aa10.63□□□□□ -0.71
CTNND1-215ENST00000526938 GSPT1P15170 499 aaKnown RBP10.62□□□□□ -0.71
CTNND1-215ENST00000526938 SDSP20132 328 aa10.62□□□□□ -0.71
CTNND1-215ENST00000526938 GSE1Q14687 1217 aa10.62□□□□□ -0.71
CTNND1-215ENST00000526938 DDX54Q8TDD1 881 aaKnown RBP10.62□□□□□ -0.71
CTNND1-215ENST00000526938 KIAA0232Q92628 1395 aa10.62□□□□□ -0.71
CTNND1-215ENST00000526938 KIF20BQ96Q89 1820 aa10.62□□□□□ -0.71
CTNND1-215ENST00000526938 DIP2AQ14689 1571 aa10.62□□□□□ -0.71
CTNND1-215ENST00000526938 RTL1A6NKG5 1358 aa10.62□□□□□ -0.71
CTNND1-215ENST00000526938 AKAP4Q5JQC9 854 aa10.62□□□□□ -0.71
CTNND1-215ENST00000526938 FOXD4L5Q5VV16 416 aaPredicted RBP10.62□□□□□ -0.71
CTNND1-215ENST00000526938 RIC3Q7Z5B4 369 aa10.62□□□□□ -0.71
CTNND1-215ENST00000526938 TTC5Q8N0Z6 440 aa10.62□□□□□ -0.71
CTNND1-215ENST00000526938 NFATC2IPQ8NCF5 419 aa10.62□□□□□ -0.71
CTNND1-215ENST00000526938 FOXD4L4Q8WXT5 416 aaPredicted RBP10.62□□□□□ -0.71
CTNND1-215ENST00000526938 PRDM11Q9NQV5 511 aa10.62□□□□□ -0.71
CTNND1-215ENST00000526938 EIF4A1P60842 406 aaKnown RBP10.61□□□□□ -0.71
CTNND1-215ENST00000526938 AMOTQ4VCS5 1084 aa10.61□□□□□ -0.71
CTNND1-215ENST00000526938 PPP1R42Q7Z4L9 355 aa10.61□□□□□ -0.71
CTNND1-215ENST00000526938 DNAAF4Q8WXU2 420 aa10.61□□□□□ -0.71
CTNND1-215ENST00000526938 CRB1P82279 1406 aa10.61□□□□□ -0.71
CTNND1-215ENST00000526938 RNMTO43148 476 aaKnown RBP10.61□□□□□ -0.71
CTNND1-215ENST00000526938 TTC22Q5TAA0 569 aa10.61□□□□□ -0.71
CTNND1-215ENST00000526938 TOM1L2Q6ZVM7 507 aa10.61□□□□□ -0.71
CTNND1-215ENST00000526938 ANO2Q9NQ90 1003 aa10.61□□□□□ -0.71
CTNND1-215ENST00000526938 ARHGAP23Q9P227 1491 aa10.61□□□□□ -0.71
CTNND1-215ENST00000526938 NBPF7P0C2Y1 421 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-215ENST00000526938 EVA1CP58658 441 aa10.61□□□□□ -0.71
CTNND1-215ENST00000526938 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-215ENST00000526938 CEP170BQ9Y4F5 1589 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-215ENST00000526938 CWF19L2Q2TBE0 894 aaKnown RBP10.6□□□□□ -0.71
CTNND1-215ENST00000526938 SSH2Q76I76 1423 aa10.6□□□□□ -0.71
CTNND1-215ENST00000526938 SIL1Q9H173 461 aa10.6□□□□□ -0.71
CTNND1-215ENST00000526938 MAP3K2Q9Y2U5 619 aa10.6□□□□□ -0.71
CTNND1-215ENST00000526938 CHMP3Q9Y3E7 222 aa10.6□□□□□ -0.71
CTNND1-215ENST00000526938 TMEM94Q12767 1356 aa10.6□□□□□ -0.71
CTNND1-215ENST00000526938 PROSER3Q2NL68 480 aa10.6□□□□□ -0.71
CTNND1-215ENST00000526938 USP44Q9H0E7 712 aa10.6□□□□□ -0.71
CTNND1-215ENST00000526938 CADPS2Q86UW7 1296 aa10.59□□□□□ -0.71
CTNND1-215ENST00000526938 SLIT1O75093 1534 aa10.59□□□□□ -0.71
CTNND1-215ENST00000526938 PTCD1O75127 700 aaKnown RBP10.59□□□□□ -0.71
CTNND1-215ENST00000526938 NCLP19338 710 aaKnown RBP10.59□□□□□ -0.71
CTNND1-215ENST00000526938 PDE1AP54750 535 aa10.59□□□□□ -0.71
CTNND1-215ENST00000526938 CHMP5Q9NZZ3 219 aa10.59□□□□□ -0.71
CTNND1-215ENST00000526938 DBF4Q9UBU7 674 aaPredicted RBP10.59□□□□□ -0.71
CTNND1-215ENST00000526938 ANKARQ7Z5J8 1434 aa10.59□□□□□ -0.71
CTNND1-215ENST00000526938 C3P01024 1663 aa10.59□□□□□ -0.71
CTNND1-215ENST00000526938 KDRP35968 1356 aa10.58□□□□□ -0.72
CTNND1-215ENST00000526938 MX1P20591 662 aa10.58□□□□□ -0.72
CTNND1-215ENST00000526938 ATP8B2P98198 1209 aa10.58□□□□□ -0.72
CTNND1-215ENST00000526938 CABP4P57796 275 aa10.58□□□□□ -0.72
CTNND1-215ENST00000526938 PA2G4Q9UQ80 394 aaKnown RBP10.58□□□□□ -0.72
CTNND1-215ENST00000526938 FOXD4L6Q3SYB3 417 aaPredicted RBP10.57□□□□□ -0.72
CTNND1-215ENST00000526938 FOXD4L3Q6VB84 417 aaPredicted RBP10.57□□□□□ -0.72
CTNND1-215ENST00000526938 CHMP4AQ9BY43 222 aa10.57□□□□□ -0.72
CTNND1-215ENST00000526938 SPG7Q9UQ90 795 aa10.57□□□□□ -0.72
CTNND1-215ENST00000526938 REC8O95072 547 aa10.57□□□□□ -0.72
CTNND1-215ENST00000526938 FER1L4A9Z1Z3 1794 aa10.57□□□□□ -0.72
CTNND1-215ENST00000526938 SETD1AO15047 1707 aaKnown RBP10.57□□□□□ -0.72
CTNND1-215ENST00000526938 DDX58O95786 925 aaKnown RBP10.57□□□□□ -0.72
CTNND1-215ENST00000526938 ADGRL3Q9HAR2 1447 aa10.56□□□□□ -0.72
CTNND1-215ENST00000526938 CD2BP2O95400 341 aaKnown RBP10.56□□□□□ -0.72
CTNND1-215ENST00000526938 NEXNQ0ZGT2 675 aa10.56□□□□□ -0.72
CTNND1-215ENST00000526938 ITSN1Q15811 1721 aa10.56□□□□□ -0.72
CTNND1-215ENST00000526938 NPHP3Q7Z494 1330 aa10.56□□□□□ -0.72
CTNND1-215ENST00000526938 ATP5J2-PTCD1G3V325 749 aa10.56□□□□□ -0.72
CTNND1-215ENST00000526938 RIMS1Q86UR5 1692 aaKnown RBP10.56□□□□□ -0.72
CTNND1-215ENST00000526938 GIGYF1O75420 1035 aaPredicted RBP10.56□□□□□ -0.72
CTNND1-215ENST00000526938 NEK4P51957 841 aa10.56□□□□□ -0.72
CTNND1-215ENST00000526938 COPS6Q7L5N1 327 aa10.56□□□□□ -0.72
CTNND1-215ENST00000526938 SYTL4Q96C24 671 aaPredicted RBP10.56□□□□□ -0.72
CTNND1-215ENST00000526938 ERC2O15083 957 aa10.55□□□□□ -0.72
CTNND1-215ENST00000526938 IFIT2P09913 472 aaKnown RBP10.55□□□□□ -0.72
CTNND1-215ENST00000526938 KCNJ4P48050 445 aa10.55□□□□□ -0.72
CTNND1-215ENST00000526938 MYD88Q99836 296 aa10.55□□□□□ -0.72
CTNND1-215ENST00000526938 IFNL2Q8IZJ0 200 aa10.55□□□□□ -0.72
CTNND1-215ENST00000526938 ANKRD26Q9UPS8 1709 aa10.55□□□□□ -0.72
CTNND1-215ENST00000526938 K7ELQ4 463 aaPredicted RBP10.54□□□□□ -0.72
CTNND1-215ENST00000526938 KIAA1211Q6ZU35 1233 aa10.54□□□□□ -0.72
CTNND1-215ENST00000526938 CLASRPQ8N2M8 674 aaKnown RBP10.54□□□□□ -0.72
CTNND1-215ENST00000526938 RHPN1Q8TCX5 695 aa10.54□□□□□ -0.72
CTNND1-215ENST00000526938 XAGE3Q8WTP9 111 aa10.54□□□□□ -0.72
CTNND1-215ENST00000526938 ZNF496Q96IT1 587 aaPredicted RBP10.54□□□□□ -0.72
CTNND1-215ENST00000526938 UPF3BQ9BZI7 483 aaKnown RBP10.54□□□□□ -0.72
CTNND1-215ENST00000526938 ERBB3P21860 1342 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms