RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 TMOD3Q9NYL9 352 aa13.25□□□□□ -0.29
TRAPPC4-206ENST00000525303 WWC3Q9ULE0 1092 aa13.25□□□□□ -0.29
TRAPPC4-206ENST00000525303 C4AP0C0L4 1744 aa13.25□□□□□ -0.29
TRAPPC4-206ENST00000525303 ADCY9O60503 1353 aa13.24□□□□□ -0.29
TRAPPC4-206ENST00000525303 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.24□□□□□ -0.29
TRAPPC4-206ENST00000525303 ASAP1Q9ULH1 1129 aa13.24□□□□□ -0.29
TRAPPC4-206ENST00000525303 GNPATO15228 680 aa13.23□□□□□ -0.29
TRAPPC4-206ENST00000525303 PHKG2P15735 406 aa13.23□□□□□ -0.29
TRAPPC4-206ENST00000525303 ATP6V1AP38606 617 aa13.23□□□□□ -0.29
TRAPPC4-206ENST00000525303 ITPK1Q13572 414 aa13.23□□□□□ -0.29
TRAPPC4-206ENST00000525303 IFNL2Q8IZJ0 200 aa13.23□□□□□ -0.29
TRAPPC4-206ENST00000525303 GPBP1L1Q9HC44 474 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC4-206ENST00000525303 POLKQ9UBT6 870 aa13.23□□□□□ -0.29
TRAPPC4-206ENST00000525303 CICQ96RK0 1608 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC4-206ENST00000525303 ZNF526Q8TF50 670 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC4-206ENST00000525303 ARFGEF1Q9Y6D6 1849 aa13.21□□□□□ -0.29
TRAPPC4-206ENST00000525303 TNNT2P45379 298 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC4-206ENST00000525303 EIF4A2Q14240 407 aaKnown RBP13.21□□□□□ -0.29
TRAPPC4-206ENST00000525303 POLR3GLQ9BT43 218 aa13.21□□□□□ -0.29
TRAPPC4-206ENST00000525303 ATG3Q9NT62 314 aa13.21□□□□□ -0.29
TRAPPC4-206ENST00000525303 SCN11AQ9UI33 1791 aa13.21□□□□□ -0.29
TRAPPC4-206ENST00000525303 KDRP35968 1356 aa13.2□□□□□ -0.3
TRAPPC4-206ENST00000525303 MMP10P09238 476 aa13.18□□□□□ -0.3
TRAPPC4-206ENST00000525303 TJP1Q07157 1748 aa13.18□□□□□ -0.3
TRAPPC4-206ENST00000525303 PLEKHG2Q9H7P9 1386 aa13.18□□□□□ -0.3
TRAPPC4-206ENST00000525303 PXDNLA1KZ92 1463 aa13.17□□□□□ -0.3
TRAPPC4-206ENST00000525303 SLC4A9Q96Q91 983 aa13.17□□□□□ -0.3
TRAPPC4-206ENST00000525303 RBM42Q9BTD8 480 aaKnown RBP13.17□□□□□ -0.3
TRAPPC4-206ENST00000525303 RTCBQ9Y3I0 505 aaKnown RBP13.17□□□□□ -0.3
TRAPPC4-206ENST00000525303 SBF1O95248 1867 aa13.16□□□□□ -0.3
TRAPPC4-206ENST00000525303 ERVV-2B6SEH9 535 aa13.16□□□□□ -0.3
TRAPPC4-206ENST00000525303 TRAPPC3LQ5T215 181 aa13.16□□□□□ -0.3
TRAPPC4-206ENST00000525303 KDM6AO15550 1401 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC4-206ENST00000525303 C10orf71Q711Q0 1435 aa13.15□□□□□ -0.3
TRAPPC4-206ENST00000525303 HSP90AB1P08238 724 aaKnown RBP13.15□□□□□ -0.3
TRAPPC4-206ENST00000525303 HSPA6P17066 643 aa13.15□□□□□ -0.3
TRAPPC4-206ENST00000525303 DCAF5Q96JK2 942 aa13.15□□□□□ -0.3
TRAPPC4-206ENST00000525303 CCDC88AQ3V6T2 1871 aa13.14□□□□□ -0.31
TRAPPC4-206ENST00000525303 AFDNP55196 1824 aaKnown RBP13.14□□□□□ -0.31
TRAPPC4-206ENST00000525303 TGFB2P61812 414 aa13.14□□□□□ -0.31
TRAPPC4-206ENST00000525303 PLEKHO1Q53GL0 409 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC4-206ENST00000525303 NLGN1Q8N2Q7 840 aa13.14□□□□□ -0.31
TRAPPC4-206ENST00000525303 ARHGEF1Q92888 912 aaKnown RBP13.14□□□□□ -0.31
TRAPPC4-206ENST00000525303 CNTNAP4Q9C0A0 1308 aa13.13□□□□□ -0.31
TRAPPC4-206ENST00000525303 ADAMTS7Q9UKP4 1686 aa13.13□□□□□ -0.31
TRAPPC4-206ENST00000525303 A0A0G2JLW4 131 aa13.13□□□□□ -0.31
TRAPPC4-206ENST00000525303 CABP4P57796 275 aa13.13□□□□□ -0.31
TRAPPC4-206ENST00000525303 RC3H1Q5TC82 1133 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-206ENST00000525303 ZNF530Q6P9A1 599 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC4-206ENST00000525303 BCS1LQ9Y276 419 aa13.13□□□□□ -0.31
TRAPPC4-206ENST00000525303 KIF3CO14782 793 aa13.12□□□□□ -0.31
TRAPPC4-206ENST00000525303 RPS6KA4O75676 772 aa13.12□□□□□ -0.31
TRAPPC4-206ENST00000525303 GYS1P13807 737 aa13.12□□□□□ -0.31
TRAPPC4-206ENST00000525303 RFC4P35249 363 aa13.12□□□□□ -0.31
TRAPPC4-206ENST00000525303 AMOTQ4VCS5 1084 aa13.12□□□□□ -0.31
TRAPPC4-206ENST00000525303 IFFO2Q5TF58 517 aa13.12□□□□□ -0.31
TRAPPC4-206ENST00000525303 AEBP1Q8IUX7 1158 aa13.12□□□□□ -0.31
TRAPPC4-206ENST00000525303 PANK3Q9H999 370 aa13.12□□□□□ -0.31
TRAPPC4-206ENST00000525303 PTCD1O75127 700 aaKnown RBP13.11□□□□□ -0.31
TRAPPC4-206ENST00000525303 MTHFSP49914 203 aa13.11□□□□□ -0.31
TRAPPC4-206ENST00000525303 EIF4G2P78344 907 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRAPPC4-206ENST00000525303 CCDC87Q9NVE4 849 aa13.11□□□□□ -0.31
TRAPPC4-206ENST00000525303 PARP3Q9Y6F1 533 aa13.11□□□□□ -0.31
TRAPPC4-206ENST00000525303 HSPA5P11021 654 aaKnown RBP13.1□□□□□ -0.31
TRAPPC4-206ENST00000525303 DPEP1P16444 411 aa13.1□□□□□ -0.31
TRAPPC4-206ENST00000525303 C1orf141Q5JVX7 400 aa13.1□□□□□ -0.31
TRAPPC4-206ENST00000525303 ARHGAP27Q6ZUM4 889 aa13.1□□□□□ -0.31
TRAPPC4-206ENST00000525303 NFATC2IPQ8NCF5 419 aa13.1□□□□□ -0.31
TRAPPC4-206ENST00000525303 WDR90Q96KV7 1748 aa13.1□□□□□ -0.31
TRAPPC4-206ENST00000525303 DLEC1Q9Y238 1755 aa13.09□□□□□ -0.31
TRAPPC4-206ENST00000525303 FCHSD2O94868 740 aa13.09□□□□□ -0.31
TRAPPC4-206ENST00000525303 MORC1Q86VD1 984 aa13.09□□□□□ -0.31
TRAPPC4-206ENST00000525303 CRKLP46109 303 aaKnown RBP13.08□□□□□ -0.32
TRAPPC4-206ENST00000525303 SULT6B1Q6IMI4 303 aa13.08□□□□□ -0.32
TRAPPC4-206ENST00000525303 SRP68Q9UHB9 627 aaKnown RBP13.08□□□□□ -0.32
TRAPPC4-206ENST00000525303 TNRC6CQ9HCJ0 1690 aaKnown RBP13.08□□□□□ -0.32
TRAPPC4-206ENST00000525303 UBR2Q8IWV8 1755 aa13.07□□□□□ -0.32
TRAPPC4-206ENST00000525303 KCNA3P22001 575 aa13.07□□□□□ -0.32
TRAPPC4-206ENST00000525303 ZEB1P37275 1124 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC4-206ENST00000525303 NRXN2Q9P2S2 1712 aa13.07□□□□□ -0.32
TRAPPC4-206ENST00000525303 USP42Q9H9J4 1324 aaKnown RBP13.07□□□□□ -0.32
TRAPPC4-206ENST00000525303 TOMM70O94826 608 aa13.06□□□□□ -0.32
TRAPPC4-206ENST00000525303 FKBP8Q14318 412 aa13.06□□□□□ -0.32
TRAPPC4-206ENST00000525303 NMRK2Q9NPI5 230 aa13.06□□□□□ -0.32
TRAPPC4-206ENST00000525303 DDR1Q08345 913 aa13.05□□□□□ -0.32
TRAPPC4-206ENST00000525303 PIM2Q9P1W9 311 aa13.05□□□□□ -0.32
TRAPPC4-206ENST00000525303 KNSTRNQ9Y448 316 aa13.05□□□□□ -0.32
TRAPPC4-206ENST00000525303 CACNA1SQ13698 1873 aa13.05□□□□□ -0.32
TRAPPC4-206ENST00000525303 MRC1P22897 1456 aa13.04□□□□□ -0.32
TRAPPC4-206ENST00000525303 IL13P35225 146 aa13.04□□□□□ -0.32
TRAPPC4-206ENST00000525303 APLP1P51693 650 aa13.04□□□□□ -0.32
TRAPPC4-206ENST00000525303 C9orf131Q5VYM1 1079 aa13.04□□□□□ -0.32
TRAPPC4-206ENST00000525303 INTS5Q6P9B9 1019 aaKnown RBP13.04□□□□□ -0.32
TRAPPC4-206ENST00000525303 TIAM2Q8IVF5 1701 aa13.04□□□□□ -0.32
TRAPPC4-206ENST00000525303 KCPQ6ZWJ8 1503 aa13.03□□□□□ -0.32
TRAPPC4-206ENST00000525303 SIPA1L3O60292 1781 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC4-206ENST00000525303 CHRNA5P30532 468 aa13.03□□□□□ -0.32
TRAPPC4-206ENST00000525303 DALRD3Q5D0E6 543 aaKnown RBP13.03□□□□□ -0.32
TRAPPC4-206ENST00000525303 AKAP4Q5JQC9 854 aa13.03□□□□□ -0.32
TRAPPC4-206ENST00000525303 DNAJC10Q8IXB1 793 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms