RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 MMP10P09238 476 aa19.18■□□□□ 0.66
CSTF3-206ENST00000524827 ATG3Q9NT62 314 aa19.18■□□□□ 0.66
CSTF3-206ENST00000524827 POLKQ9UBT6 870 aa19.18■□□□□ 0.66
CSTF3-206ENST00000524827 KIF13BQ9NQT8 1826 aa19.18■□□□□ 0.66
CSTF3-206ENST00000524827 KDRP35968 1356 aa19.18■□□□□ 0.66
CSTF3-206ENST00000524827 KIAA1551Q9HCM1 1747 aa19.17■□□□□ 0.66
CSTF3-206ENST00000524827 KIF3CO14782 793 aa19.16■□□□□ 0.66
CSTF3-206ENST00000524827 EIF4A2Q14240 407 aaKnown RBP19.15■□□□□ 0.66
CSTF3-206ENST00000524827 PLEKHG2Q9H7P9 1386 aa19.14■□□□□ 0.65
CSTF3-206ENST00000524827 C10orf71Q711Q0 1435 aa19.14■□□□□ 0.65
CSTF3-206ENST00000524827 ZNF831Q5JPB2 1677 aa19.14■□□□□ 0.65
CSTF3-206ENST00000524827 N4BP2Q86UW6 1770 aaPredicted RBP19.14■□□□□ 0.65
CSTF3-206ENST00000524827 SLC4A9Q96Q91 983 aa19.13■□□□□ 0.65
CSTF3-206ENST00000524827 RTCBQ9Y3I0 505 aaKnown RBP19.13■□□□□ 0.65
CSTF3-206ENST00000524827 COL5A3P25940 1745 aaPredicted RBP19.12■□□□□ 0.65
CSTF3-206ENST00000524827 TNNT2P45379 298 aaPredicted RBP19.12■□□□□ 0.65
CSTF3-206ENST00000524827 TRAPPC3LQ5T215 181 aa19.12■□□□□ 0.65
CSTF3-206ENST00000524827 TGFB2P61812 414 aa19.11■□□□□ 0.65
CSTF3-206ENST00000524827 NLGN1Q8N2Q7 840 aa19.11■□□□□ 0.65
CSTF3-206ENST00000524827 RBM42Q9BTD8 480 aaKnown RBP19.11■□□□□ 0.65
CSTF3-206ENST00000524827 C4AP0C0L4 1744 aa19.11■□□□□ 0.65
CSTF3-206ENST00000524827 CNTNAP4Q9C0A0 1308 aa19.1■□□□□ 0.65
CSTF3-206ENST00000524827 A0A0G2JLW4 131 aa19.1■□□□□ 0.65
CSTF3-206ENST00000524827 ERVV-2B6SEH9 535 aa19.1■□□□□ 0.65
CSTF3-206ENST00000524827 ADRA2BP18089 450 aa19.1■□□□□ 0.65
CSTF3-206ENST00000524827 BCS1LQ9Y276 419 aa19.1■□□□□ 0.65
CSTF3-206ENST00000524827 KDM6AO15550 1401 aaPredicted RBP19.09■□□□□ 0.65
CSTF3-206ENST00000524827 RC3H1Q5TC82 1133 aaKnown RBP19.09■□□□□ 0.65
CSTF3-206ENST00000524827 ARHGEF1Q92888 912 aaKnown RBP19.09■□□□□ 0.65
CSTF3-206ENST00000524827 DCAF5Q96JK2 942 aa19.09■□□□□ 0.65
CSTF3-206ENST00000524827 HSP90AB1P08238 724 aaKnown RBP19.08■□□□□ 0.64
CSTF3-206ENST00000524827 GYS1P13807 737 aa19.08■□□□□ 0.64
CSTF3-206ENST00000524827 POLR3GLQ9BT43 218 aa19.08■□□□□ 0.64
CSTF3-206ENST00000524827 CCDC87Q9NVE4 849 aa19.08■□□□□ 0.64
CSTF3-206ENST00000524827 BRCA1P38398 1863 aaKnown RBP19.07■□□□□ 0.64
CSTF3-206ENST00000524827 MYH14Q7Z406 1995 aaKnown RBP19.07■□□□□ 0.64
CSTF3-206ENST00000524827 DPEP1P16444 411 aa19.07■□□□□ 0.64
CSTF3-206ENST00000524827 RPS6KA4O75676 772 aa19.06■□□□□ 0.64
CSTF3-206ENST00000524827 RFC4P35249 363 aa19.06■□□□□ 0.64
CSTF3-206ENST00000524827 PLEKHO1Q53GL0 409 aaPredicted RBP19.06■□□□□ 0.64
CSTF3-206ENST00000524827 ZNF530Q6P9A1 599 aaPredicted RBP19.06■□□□□ 0.64
CSTF3-206ENST00000524827 ARHGAP27Q6ZUM4 889 aa19.06■□□□□ 0.64
CSTF3-206ENST00000524827 CABP4P57796 275 aa19.05■□□□□ 0.64
CSTF3-206ENST00000524827 PARP3Q9Y6F1 533 aa19.05■□□□□ 0.64
CSTF3-206ENST00000524827 TOMM70O94826 608 aa19.04■□□□□ 0.64
CSTF3-206ENST00000524827 FCHSD2O94868 740 aa19.04■□□□□ 0.64
CSTF3-206ENST00000524827 APLP1P51693 650 aa19.04■□□□□ 0.64
CSTF3-206ENST00000524827 NMRK2Q9NPI5 230 aa19.03■□□□□ 0.64
CSTF3-206ENST00000524827 TIMELESSQ9UNS1 1208 aa19.03■□□□□ 0.64
CSTF3-206ENST00000524827 ARFGEF1Q9Y6D6 1849 aa19.02■□□□□ 0.64
CSTF3-206ENST00000524827 PTCD1O75127 700 aaKnown RBP19.02■□□□□ 0.64
CSTF3-206ENST00000524827 AMOTQ4VCS5 1084 aa19.02■□□□□ 0.64
CSTF3-206ENST00000524827 AEBP1Q8IUX7 1158 aa19.02■□□□□ 0.64
CSTF3-206ENST00000524827 TJP1Q07157 1748 aa19.01■□□□□ 0.63
CSTF3-206ENST00000524827 KCNA3P22001 575 aa19.01■□□□□ 0.63
CSTF3-206ENST00000524827 CRKLP46109 303 aaKnown RBP19.01■□□□□ 0.63
CSTF3-206ENST00000524827 MTHFSP49914 203 aa19.01■□□□□ 0.63
CSTF3-206ENST00000524827 TRIM26Q12899 539 aaPredicted RBP19.01■□□□□ 0.63
CSTF3-206ENST00000524827 SRP68Q9UHB9 627 aaKnown RBP19.01■□□□□ 0.63
CSTF3-206ENST00000524827 C1orf141Q5JVX7 400 aa19■□□□□ 0.63
CSTF3-206ENST00000524827 C9orf131Q5VYM1 1079 aa19■□□□□ 0.63
CSTF3-206ENST00000524827 USP42Q9H9J4 1324 aaKnown RBP19■□□□□ 0.63
CSTF3-206ENST00000524827 DDR1Q08345 913 aa18.99■□□□□ 0.63
CSTF3-206ENST00000524827 FKBP8Q14318 412 aa18.99■□□□□ 0.63
CSTF3-206ENST00000524827 PANK3Q9H999 370 aa18.99■□□□□ 0.63
CSTF3-206ENST00000524827 DNAJC5GQ8N7S2 189 aa18.98■□□□□ 0.63
CSTF3-206ENST00000524827 NFATC2IPQ8NCF5 419 aa18.98■□□□□ 0.63
CSTF3-206ENST00000524827 PIM2Q9P1W9 311 aa18.98■□□□□ 0.63
CSTF3-206ENST00000524827 WDR90Q96KV7 1748 aa18.97■□□□□ 0.63
CSTF3-206ENST00000524827 ADAMTS7Q9UKP4 1686 aa18.96■□□□□ 0.63
CSTF3-206ENST00000524827 DALRD3Q5D0E6 543 aaKnown RBP18.96■□□□□ 0.63
CSTF3-206ENST00000524827 SULT6B1Q6IMI4 303 aa18.96■□□□□ 0.63
CSTF3-206ENST00000524827 RBM46Q8TBY0 533 aaKnown RBP18.96■□□□□ 0.63
CSTF3-206ENST00000524827 SCN11AQ9UI33 1791 aa18.96■□□□□ 0.63
CSTF3-206ENST00000524827 KCPQ6ZWJ8 1503 aa18.95■□□□□ 0.62
CSTF3-206ENST00000524827 MORC1Q86VD1 984 aa18.95■□□□□ 0.62
CSTF3-206ENST00000524827 CHRNA5P30532 468 aa18.94■□□□□ 0.62
CSTF3-206ENST00000524827 INTS5Q6P9B9 1019 aaKnown RBP18.94■□□□□ 0.62
CSTF3-206ENST00000524827 RNF181Q9P0P0 153 aa18.94■□□□□ 0.62
CSTF3-206ENST00000524827 POLRMTO00411 1230 aaKnown RBP18.93■□□□□ 0.62
CSTF3-206ENST00000524827 HSPA5P11021 654 aaKnown RBP18.93■□□□□ 0.62
CSTF3-206ENST00000524827 EIF4G2P78344 907 aaKnown RBP eCLIP18.93■□□□□ 0.62
CSTF3-206ENST00000524827 C16orf71Q8IYS4 520 aaPredicted RBP18.93■□□□□ 0.62
CSTF3-206ENST00000524827 IL13P35225 146 aa18.92■□□□□ 0.62
CSTF3-206ENST00000524827 DNAJC10Q8IXB1 793 aa18.92■□□□□ 0.62
CSTF3-206ENST00000524827 KDM2BQ8NHM5 1336 aa18.92■□□□□ 0.62
CSTF3-206ENST00000524827 CLSPNQ9HAW4 1339 aa18.92■□□□□ 0.62
CSTF3-206ENST00000524827 SBF1O95248 1867 aa18.91■□□□□ 0.62
CSTF3-206ENST00000524827 TM4SF1P30408 202 aa18.91■□□□□ 0.62
CSTF3-206ENST00000524827 SOS1Q07889 1333 aaPredicted RBP18.91■□□□□ 0.62
CSTF3-206ENST00000524827 TNRC6CQ9HCJ0 1690 aaKnown RBP18.9■□□□□ 0.62
CSTF3-206ENST00000524827 HTRA3P83110 453 aa18.9■□□□□ 0.62
CSTF3-206ENST00000524827 FSTL1Q12841 308 aa18.9■□□□□ 0.62
CSTF3-206ENST00000524827 AKAP4Q5JQC9 854 aa18.9■□□□□ 0.62
CSTF3-206ENST00000524827 USPL1Q5W0Q7 1092 aa18.9■□□□□ 0.62
CSTF3-206ENST00000524827 MRC1P22897 1456 aa18.9■□□□□ 0.62
CSTF3-206ENST00000524827 ZPR1O75312 459 aa18.89■□□□□ 0.61
CSTF3-206ENST00000524827 SLC52A2Q9HAB3 445 aa18.89■□□□□ 0.61
CSTF3-206ENST00000524827 AFDNP55196 1824 aaKnown RBP18.88■□□□□ 0.61
CSTF3-206ENST00000524827 CYP19A1P11511 503 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms