RNA–Protein interactions for RNA: ENST00000524630.5

CTNND1-210, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTNND1, Length 6,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-210ENST00000524630 ZNF530Q6P9A1 599 aaPredicted RBP11.88□□□□□ -0.51
CTNND1-210ENST00000524630 TMX1Q9H3N1 280 aa11.88□□□□□ -0.51
CTNND1-210ENST00000524630 CC2D2AQ9P2K1 1620 aa11.88□□□□□ -0.51
CTNND1-210ENST00000524630 TRMT1Q9NXH9 659 aaKnown RBP11.88□□□□□ -0.51
CTNND1-210ENST00000524630 PDIA4P13667 645 aaKnown RBP11.88□□□□□ -0.51
CTNND1-210ENST00000524630 GTF2F1P35269 517 aaKnown RBP eCLIP11.88□□□□□ -0.515e-6■■■□□ 17.8
CTNND1-210ENST00000524630 FERMT3Q86UX7 667 aa11.88□□□□□ -0.51
CTNND1-210ENST00000524630 CLCN1P35523 988 aa11.87□□□□□ -0.51
CTNND1-210ENST00000524630 SYCP1Q15431 976 aa11.87□□□□□ -0.51
CTNND1-210ENST00000524630 GPATCH11Q8N954 259 aa11.87□□□□□ -0.51
CTNND1-210ENST00000524630 NACAP1Q9BZK3 213 aa11.87□□□□□ -0.51
CTNND1-210ENST00000524630 EPB41L2O43491 1005 aaKnown RBP11.87□□□□□ -0.51
CTNND1-210ENST00000524630 URI1O94763 535 aaPredicted RBP11.87□□□□□ -0.51
CTNND1-210ENST00000524630 ENOX2Q16206 610 aaKnown RBP11.87□□□□□ -0.51
CTNND1-210ENST00000524630 CFAP100Q494V2 611 aa11.87□□□□□ -0.51
CTNND1-210ENST00000524630 KIAA1328Q86T90 577 aa11.87□□□□□ -0.51
CTNND1-210ENST00000524630 RPGRIP1LQ68CZ1 1315 aa11.87□□□□□ -0.51
CTNND1-210ENST00000524630 ABCC11Q96J66 1382 aa11.87□□□□□ -0.51
CTNND1-210ENST00000524630 IFT140Q96RY7 1462 aa11.87□□□□□ -0.51
CTNND1-210ENST00000524630 SHTN1A0MZ66 631 aa11.87□□□□□ -0.51
CTNND1-210ENST00000524630 HMGXB3Q12766 1538 aa11.87□□□□□ -0.51
CTNND1-210ENST00000524630 OSCARQ8IYS5 282 aa11.87□□□□□ -0.51
CTNND1-210ENST00000524630 TXLNBQ8N3L3 684 aa11.87□□□□□ -0.51
CTNND1-210ENST00000524630 MCM10Q7L590 875 aa11.87□□□□□ -0.51
CTNND1-210ENST00000524630 LUC7LQ9NQ29 371 aaKnown RBP11.87□□□□□ -0.51
CTNND1-210ENST00000524630 GNAT3A8MTJ3 354 aa11.86□□□□□ -0.51
CTNND1-210ENST00000524630 KIF1BPQ96EK5 621 aa11.86□□□□□ -0.51
CTNND1-210ENST00000524630 TBC1D9Q6ZT07 1266 aa11.86□□□□□ -0.51
CTNND1-210ENST00000524630 TBC1D32Q96NH3 1257 aa11.86□□□□□ -0.51
CTNND1-210ENST00000524630 CCDC57Q2TAC2 916 aa11.86□□□□□ -0.51
CTNND1-210ENST00000524630 CTNNA3Q9UI47 895 aa11.86□□□□□ -0.51
CTNND1-210ENST00000524630 TAX1BP1Q86VP1 789 aa11.86□□□□□ -0.51
CTNND1-210ENST00000524630 GNL3LQ9NVN8 582 aaKnown RBP11.86□□□□□ -0.51
CTNND1-210ENST00000524630 RPRD2Q5VT52 1461 aaKnown RBP11.86□□□□□ -0.51
CTNND1-210ENST00000524630 ZSCAN12O43309 604 aa11.86□□□□□ -0.51
CTNND1-210ENST00000524630 GBP3Q9H0R5 595 aa11.86□□□□□ -0.51
CTNND1-210ENST00000524630 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.86□□□□□ -0.511e-6■■■■■ 38.5
CTNND1-210ENST00000524630 NEFHP12036 1026 aa11.85□□□□□ -0.51
CTNND1-210ENST00000524630 IBSPP21815 317 aaPredicted RBP11.85□□□□□ -0.51
CTNND1-210ENST00000524630 ANO10Q9NW15 660 aa11.85□□□□□ -0.51
CTNND1-210ENST00000524630 BAG4O95429 457 aaKnown RBP11.85□□□□□ -0.51
CTNND1-210ENST00000524630 TRIM27P14373 513 aa11.85□□□□□ -0.51
CTNND1-210ENST00000524630 XRCC6P12956 609 aaKnown RBP eCLIP11.85□□□□□ -0.512e-8■□□□□ 8.5
CTNND1-210ENST00000524630 MAPKBP1O60336 1514 aa11.85□□□□□ -0.51
CTNND1-210ENST00000524630 SFPQP23246 707 aaKnown RBP eCLIP11.85□□□□□ -0.511e-8■■■□□ 15.1
CTNND1-210ENST00000524630 SEPT7Q16181 437 aaKnown RBP11.85□□□□□ -0.51
CTNND1-210ENST00000524630 IMMTQ16891 758 aaKnown RBP11.85□□□□□ -0.51
CTNND1-210ENST00000524630 CRACR2AQ9BSW2 395 aa11.85□□□□□ -0.51
CTNND1-210ENST00000524630 SPINK5Q9NQ38 1064 aaPredicted RBP11.85□□□□□ -0.51
CTNND1-210ENST00000524630 PRIMPOLQ96LW4 560 aa11.84□□□□□ -0.51
CTNND1-210ENST00000524630 DISP3Q9P2K9 1392 aa11.84□□□□□ -0.51
CTNND1-210ENST00000524630 ARHGAP29Q52LW3 1261 aa11.84□□□□□ -0.51
CTNND1-210ENST00000524630 CEP135Q66GS9 1140 aa11.84□□□□□ -0.51
CTNND1-210ENST00000524630 SH2B1Q9NRF2 756 aaPredicted RBP11.84□□□□□ -0.51
CTNND1-210ENST00000524630 DDX54Q8TDD1 881 aaKnown RBP11.84□□□□□ -0.51
CTNND1-210ENST00000524630 WASF1Q92558 559 aa11.84□□□□□ -0.51
CTNND1-210ENST00000524630 ZHX3Q9H4I2 956 aa11.84□□□□□ -0.51
CTNND1-210ENST00000524630 ZNF830Q96NB3 372 aaPredicted RBP11.84□□□□□ -0.51
CTNND1-210ENST00000524630 PANK2Q9BZ23 570 aa11.84□□□□□ -0.51
CTNND1-210ENST00000524630 SPG7Q9UQ90 795 aa11.84□□□□□ -0.51
CTNND1-210ENST00000524630 GLRX3O76003 335 aaKnown RBP11.84□□□□□ -0.51
CTNND1-210ENST00000524630 CEP131Q9UPN4 1083 aa11.84□□□□□ -0.51
CTNND1-210ENST00000524630 TDO2P48775 406 aa11.83□□□□□ -0.51
CTNND1-210ENST00000524630 LARP6Q9BRS8 491 aaKnown RBP11.83□□□□□ -0.51
CTNND1-210ENST00000524630 CKAP2LQ8IYA6 745 aa11.83□□□□□ -0.52
CTNND1-210ENST00000524630 KIF5CO60282 957 aa11.83□□□□□ -0.52
CTNND1-210ENST00000524630 TIGD1Q96MW7 591 aa11.83□□□□□ -0.52
CTNND1-210ENST00000524630 SCAND2PQ9GZW5 306 aaPredicted RBP11.83□□□□□ -0.52
CTNND1-210ENST00000524630 GDPD2Q9HCC8 539 aa11.83□□□□□ -0.52
CTNND1-210ENST00000524630 JAKMIP3Q5VZ66 844 aa11.83□□□□□ -0.52
CTNND1-210ENST00000524630 MAP9Q49MG5 647 aa11.83□□□□□ -0.52
CTNND1-210ENST00000524630 MAGI1Q96QZ7 1491 aaPredicted RBP11.82□□□□□ -0.52
CTNND1-210ENST00000524630 LIMCH1Q9UPQ0 1083 aa11.82□□□□□ -0.52
CTNND1-210ENST00000524630 GJB2P29033 226 aa11.82□□□□□ -0.52
CTNND1-210ENST00000524630 UVSSAQ2YD98 709 aa11.82□□□□□ -0.52
CTNND1-210ENST00000524630 LRSAM1Q6UWE0 723 aa11.82□□□□□ -0.52
CTNND1-210ENST00000524630 UBAC1Q9BSL1 405 aa11.82□□□□□ -0.52
CTNND1-210ENST00000524630 ZFP91Q96JP5 570 aaPredicted RBP11.82□□□□□ -0.52
CTNND1-210ENST00000524630 ANKRD62A6NC57 917 aa11.82□□□□□ -0.52
CTNND1-210ENST00000524630 EIF5P55010 431 aaKnown RBP11.82□□□□□ -0.52
CTNND1-210ENST00000524630 GUCY1B3Q02153 619 aa11.82□□□□□ -0.52
CTNND1-210ENST00000524630 BOLA2Q9H3K6 86 aa11.82□□□□□ -0.52
CTNND1-210ENST00000524630 F6X3S4 739 aa11.81□□□□□ -0.52
CTNND1-210ENST00000524630 TOP1P11387 765 aaKnown RBP11.81□□□□□ -0.52
CTNND1-210ENST00000524630 ATP2B2Q01814 1243 aa11.81□□□□□ -0.52
CTNND1-210ENST00000524630 SOGA3Q5TF21 947 aa11.81□□□□□ -0.52
CTNND1-210ENST00000524630 TICAM2Q86XR7 235 aa11.81□□□□□ -0.52
CTNND1-210ENST00000524630 PAXBP1Q9Y5B6 917 aa11.81□□□□□ -0.52
CTNND1-210ENST00000524630 KLHL40Q2TBA0 621 aa11.81□□□□□ -0.52
CTNND1-210ENST00000524630 BMP2KLQ5H9B9 411 aa11.81□□□□□ -0.52
CTNND1-210ENST00000524630 PIBF1Q8WXW3 757 aa11.81□□□□□ -0.52
CTNND1-210ENST00000524630 SLC52A1Q9NWF4 448 aa11.81□□□□□ -0.52
CTNND1-210ENST00000524630 BIVM-ERCC5R4GMW8 1640 aa11.81□□□□□ -0.52
CTNND1-210ENST00000524630 SCAF11Q99590 1463 aaKnown RBP11.81□□□□□ -0.52
CTNND1-210ENST00000524630 DHX29Q7Z478 1369 aaKnown RBP11.81□□□□□ -0.52
CTNND1-210ENST00000524630 RNF187Q5TA31 235 aaPredicted RBP11.81□□□□□ -0.52
CTNND1-210ENST00000524630 MCM3P25205 808 aa11.81□□□□□ -0.52
CTNND1-210ENST00000524630 INCENPQ9NQS7 918 aa11.81□□□□□ -0.52
CTNND1-210ENST00000524630 RAI14Q9P0K7 980 aa11.81□□□□□ -0.52
CTNND1-210ENST00000524630 CTAGE5O15320 804 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms