RNA–Protein interactions for RNA: ENST00000524086.5

MCM4-216, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 5

Gene MCM4, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-216ENST00000524086 GNPATO15228 680 aa17.17■□□□□ 0.34
MCM4-216ENST00000524086 ADRA2BP18089 450 aa17.17■□□□□ 0.34
MCM4-216ENST00000524086 NLGN1Q8N2Q7 840 aa17.17■□□□□ 0.34
MCM4-216ENST00000524086 C5P01031 1676 aa17.16■□□□□ 0.34
MCM4-216ENST00000524086 ITPK1Q13572 414 aa17.15■□□□□ 0.34
MCM4-216ENST00000524086 RBM42Q9BTD8 480 aaKnown RBP17.15■□□□□ 0.34
MCM4-216ENST00000524086 CHD4Q14839 1912 aa17.15■□□□□ 0.34
MCM4-216ENST00000524086 C4BP0C0L5 1744 aa17.14■□□□□ 0.33
MCM4-216ENST00000524086 YBX3P16989 372 aaKnown RBP eCLIP17.14■□□□□ 0.33
MCM4-216ENST00000524086 SULT6B1Q6IMI4 303 aa17.14■□□□□ 0.33
MCM4-216ENST00000524086 IL13P35225 146 aa17.13■□□□□ 0.33
MCM4-216ENST00000524086 C1QTNF8P60827 252 aa17.13■□□□□ 0.33
MCM4-216ENST00000524086 UTRNP46939 3433 aa17.12■□□□□ 0.33
MCM4-216ENST00000524086 GIGYF1O75420 1035 aaPredicted RBP17.12■□□□□ 0.33
MCM4-216ENST00000524086 RPS6KA4O75676 772 aa17.12■□□□□ 0.33
MCM4-216ENST00000524086 RFC4P35249 363 aa17.12■□□□□ 0.33
MCM4-216ENST00000524086 AMER1Q5JTC6 1135 aaPredicted RBP17.12■□□□□ 0.33
MCM4-216ENST00000524086 CNTNAP4Q9C0A0 1308 aa17.12■□□□□ 0.33
MCM4-216ENST00000524086 ITGB4P16144 1822 aa17.12■□□□□ 0.33
MCM4-216ENST00000524086 AMIGO3Q86WK7 504 aa17.11■□□□□ 0.33
MCM4-216ENST00000524086 NFATC2IPQ8NCF5 419 aa17.11■□□□□ 0.33
MCM4-216ENST00000524086 TUBGCP6Q96RT7 1819 aa17.11■□□□□ 0.33
MCM4-216ENST00000524086 KDRP35968 1356 aa17.11■□□□□ 0.33
MCM4-216ENST00000524086 TGFB2P61812 414 aa17.1■□□□□ 0.33
MCM4-216ENST00000524086 AKAP4Q5JQC9 854 aa17.1■□□□□ 0.33
MCM4-216ENST00000524086 TOGARAM1Q9Y4F4 1720 aa17.1■□□□□ 0.33
MCM4-216ENST00000524086 TAF1LQ8IZX4 1826 aa17.1■□□□□ 0.33
MCM4-216ENST00000524086 MMP10P09238 476 aa17.09■□□□□ 0.33
MCM4-216ENST00000524086 AEBP1Q8IUX7 1158 aa17.09■□□□□ 0.33
MCM4-216ENST00000524086 ARHGEF1Q92888 912 aaKnown RBP17.09■□□□□ 0.33
MCM4-216ENST00000524086 KIF7Q2M1P5 1343 aa17.09■□□□□ 0.33
MCM4-216ENST00000524086 PER1O15534 1290 aaPredicted RBP17.07■□□□□ 0.32
MCM4-216ENST00000524086 DIAPH1O60610 1272 aaKnown RBP17.07■□□□□ 0.32
MCM4-216ENST00000524086 PTCD1O75127 700 aaKnown RBP17.07■□□□□ 0.32
MCM4-216ENST00000524086 SLC4A9Q96Q91 983 aa17.07■□□□□ 0.32
MCM4-216ENST00000524086 CCDC87Q9NVE4 849 aa17.07■□□□□ 0.32
MCM4-216ENST00000524086 PARP3Q9Y6F1 533 aa17.07■□□□□ 0.32
MCM4-216ENST00000524086 SMIM5Q71RC9 77 aa17.06■□□□□ 0.32
MCM4-216ENST00000524086 KDM6AO15550 1401 aaPredicted RBP17.05■□□□□ 0.32
MCM4-216ENST00000524086 SLC52A2Q9HAB3 445 aa17.05■□□□□ 0.32
MCM4-216ENST00000524086 GPBP1L1Q9HC44 474 aaPredicted RBP17.05■□□□□ 0.32
MCM4-216ENST00000524086 UBR3Q6ZT12 1888 aa17.04■□□□□ 0.32
MCM4-216ENST00000524086 SENP3-EIF4A1A0A087X0R7 540 aa17.04■□□□□ 0.32
MCM4-216ENST00000524086 GYS1P13807 737 aa17.04■□□□□ 0.32
MCM4-216ENST00000524086 CRKLP46109 303 aaKnown RBP17.04■□□□□ 0.32
MCM4-216ENST00000524086 ZNF831Q5JPB2 1677 aa17.04■□□□□ 0.32
MCM4-216ENST00000524086 NPC1L1Q9UHC9 1359 aa17.03■□□□□ 0.32
MCM4-216ENST00000524086 CC2D1BQ5T0F9 858 aaKnown RBP17.02■□□□□ 0.32
MCM4-216ENST00000524086 GOLGB1Q14789 3259 aaKnown RBP17.02■□□□□ 0.31
MCM4-216ENST00000524086 RNMTO43148 476 aaKnown RBP17.01■□□□□ 0.31
MCM4-216ENST00000524086 ZPR1O75312 459 aa17.01■□□□□ 0.31
MCM4-216ENST00000524086 VSIG10Q8N0Z9 540 aa17.01■□□□□ 0.31
MCM4-216ENST00000524086 HMOX1P09601 288 aa17■□□□□ 0.31
MCM4-216ENST00000524086 LGR6Q9HBX8 967 aa17■□□□□ 0.31
MCM4-216ENST00000524086 ATP10DQ9P241 1426 aa16.99■□□□□ 0.31
MCM4-216ENST00000524086 A0A0G2JLW4 131 aa16.98■□□□□ 0.31
MCM4-216ENST00000524086 MTHFSDQ2M296 383 aaKnown RBP16.98■□□□□ 0.31
MCM4-216ENST00000524086 INTS5Q6P9B9 1019 aaKnown RBP16.98■□□□□ 0.31
MCM4-216ENST00000524086 GAS2L2Q8NHY3 880 aa16.98■□□□□ 0.31
MCM4-216ENST00000524086 CFAP53Q96M91 514 aa16.98■□□□□ 0.31
MCM4-216ENST00000524086 TEX13AQ9BXU3 409 aaPredicted RBP16.98■□□□□ 0.31
MCM4-216ENST00000524086 PIM2Q9P1W9 311 aa16.98■□□□□ 0.31
MCM4-216ENST00000524086 BCS1LQ9Y276 419 aa16.98■□□□□ 0.31
MCM4-216ENST00000524086 USP42Q9H9J4 1324 aaKnown RBP16.97■□□□□ 0.31
MCM4-216ENST00000524086 TTC5Q8N0Z6 440 aa16.97■□□□□ 0.31
MCM4-216ENST00000524086 STARD3NLO95772 234 aa16.96■□□□□ 0.31
MCM4-216ENST00000524086 DPEP1P16444 411 aa16.96■□□□□ 0.31
MCM4-216ENST00000524086 DNAJC10Q8IXB1 793 aa16.96■□□□□ 0.31
MCM4-216ENST00000524086 NUDCQ9Y266 331 aa16.96■□□□□ 0.31
MCM4-216ENST00000524086 C10orf71Q711Q0 1435 aa16.96■□□□□ 0.3
MCM4-216ENST00000524086 ADCY9O60503 1353 aa16.95■□□□□ 0.3
MCM4-216ENST00000524086 GNAT3A8MTJ3 354 aa16.95■□□□□ 0.3
MCM4-216ENST00000524086 U2SURPO15042 1029 aaKnown RBP16.95■□□□□ 0.3
MCM4-216ENST00000524086 FCHSD2O94868 740 aa16.95■□□□□ 0.3
MCM4-216ENST00000524086 CYP19A1P11511 503 aaPredicted RBP16.95■□□□□ 0.3
MCM4-216ENST00000524086 FKBP8Q14318 412 aa16.95■□□□□ 0.3
MCM4-216ENST00000524086 ARHGAP27Q6ZUM4 889 aa16.95■□□□□ 0.3
MCM4-216ENST00000524086 NARFQ9UHQ1 456 aa16.95■□□□□ 0.3
MCM4-216ENST00000524086 PXDNLA1KZ92 1463 aa16.94■□□□□ 0.3
MCM4-216ENST00000524086 A0A087WZG4 1122 aa16.94■□□□□ 0.3
MCM4-216ENST00000524086 TM4SF1P30408 202 aa16.94■□□□□ 0.3
MCM4-216ENST00000524086 TEFQ10587 303 aa16.94■□□□□ 0.3
MCM4-216ENST00000524086 DALRD3Q5D0E6 543 aaKnown RBP16.94■□□□□ 0.3
MCM4-216ENST00000524086 WWC3Q9ULE0 1092 aa16.94■□□□□ 0.3
MCM4-216ENST00000524086 SLC39A6Q13433 755 aa16.93■□□□□ 0.3
MCM4-216ENST00000524086 NPM2Q86SE8 214 aaKnown RBP16.93■□□□□ 0.3
MCM4-216ENST00000524086 SRP68Q9UHB9 627 aaKnown RBP16.93■□□□□ 0.3
MCM4-216ENST00000524086 SOS1Q07889 1333 aaPredicted RBP16.93■□□□□ 0.3
MCM4-216ENST00000524086 CICQ96RK0 1608 aaPredicted RBP16.92■□□□□ 0.3
MCM4-216ENST00000524086 KCNA3P22001 575 aa16.91■□□□□ 0.3
MCM4-216ENST00000524086 USPL1Q5W0Q7 1092 aa16.91■□□□□ 0.3
MCM4-216ENST00000524086 ZNF526Q8TF50 670 aaPredicted RBP16.91■□□□□ 0.3
MCM4-216ENST00000524086 COL5A3P25940 1745 aaPredicted RBP16.9■□□□□ 0.3
MCM4-216ENST00000524086 POLRMTO00411 1230 aaKnown RBP16.9■□□□□ 0.3
MCM4-216ENST00000524086 ZNF790Q6PG37 636 aa16.9■□□□□ 0.3
MCM4-216ENST00000524086 PDZRN3Q9UPQ7 1066 aa16.9■□□□□ 0.3
MCM4-216ENST00000524086 MRC1P22897 1456 aa16.89■□□□□ 0.29
MCM4-216ENST00000524086 DDR1Q08345 913 aa16.89■□□□□ 0.29
MCM4-216ENST00000524086 C4AP0C0L4 1744 aa16.89■□□□□ 0.29
MCM4-216ENST00000524086 SCN11AQ9UI33 1791 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms