RNA–Protein interactions for RNA: ENST00000523799.5

CCNC-215, Transcript of cyclin C, humanhuman

TSL 3 BASIC

Gene CCNC, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-215ENST00000523799 PLCG2P16885 1265 aa12.18□□□□□ -0.46
CCNC-215ENST00000523799 PRELPP51888 382 aa12.18□□□□□ -0.46
CCNC-215ENST00000523799 LY75O60449 1722 aa12.17□□□□□ -0.46
CCNC-215ENST00000523799 IL2RBP14784 551 aa12.17□□□□□ -0.46
CCNC-215ENST00000523799 COL13A1Q5TAT6 717 aaPredicted RBP12.17□□□□□ -0.46
CCNC-215ENST00000523799 STK25O00506 426 aa12.16□□□□□ -0.46
CCNC-215ENST00000523799 TOMM70O94826 608 aa12.16□□□□□ -0.46
CCNC-215ENST00000523799 TNS4Q8IZW8 715 aa12.16□□□□□ -0.46
CCNC-215ENST00000523799 WDR90Q96KV7 1748 aa12.16□□□□□ -0.46
CCNC-215ENST00000523799 KIAA1210Q9ULL0 1709 aa12.16□□□□□ -0.46
CCNC-215ENST00000523799 CABP1Q9NZU7 370 aa12.15□□□□□ -0.46
CCNC-215ENST00000523799 IRX5P78411 483 aaPredicted RBP12.14□□□□□ -0.47
CCNC-215ENST00000523799 GOLGA2Q08379 1002 aa12.14□□□□□ -0.47
CCNC-215ENST00000523799 STK24Q9Y6E0 443 aa12.14□□□□□ -0.47
CCNC-215ENST00000523799 NFAT5O94916 1531 aa12.14□□□□□ -0.47
CCNC-215ENST00000523799 SOX12O15370 315 aa12.13□□□□□ -0.47
CCNC-215ENST00000523799 HMGB2P26583 209 aaKnown RBP12.13□□□□□ -0.47
CCNC-215ENST00000523799 COL23A1Q86Y22 540 aaPredicted RBP12.13□□□□□ -0.47
CCNC-215ENST00000523799 JMYQ8N9B5 988 aa12.13□□□□□ -0.47
CCNC-215ENST00000523799 NLRP2Q9NX02 1062 aa12.13□□□□□ -0.47
CCNC-215ENST00000523799 ERBB3P21860 1342 aa12.12□□□□□ -0.47
CCNC-215ENST00000523799 MKRN3Q13064 507 aaKnown RBP12.12□□□□□ -0.47
CCNC-215ENST00000523799 HS6ST3Q8IZP7 471 aa12.12□□□□□ -0.47
CCNC-215ENST00000523799 EFCAB3Q8N7B9 438 aa12.12□□□□□ -0.47
CCNC-215ENST00000523799 SLAIN1Q8ND83 568 aa12.12□□□□□ -0.47
CCNC-215ENST00000523799 KLRG1Q96E93 195 aa12.12□□□□□ -0.47
CCNC-215ENST00000523799 TTC21BQ7Z4L5 1316 aa12.11□□□□□ -0.47
CCNC-215ENST00000523799 TTC21AQ8NDW8 1320 aa12.11□□□□□ -0.47
CCNC-215ENST00000523799 KCNQ4P56696 695 aa12.11□□□□□ -0.47
CCNC-215ENST00000523799 MSL1Q68DK7 614 aa12.11□□□□□ -0.47
CCNC-215ENST00000523799 FLAD1Q8NFF5 587 aa12.11□□□□□ -0.47
CCNC-215ENST00000523799 CENPJQ9HC77 1338 aaPredicted RBP12.11□□□□□ -0.47
CCNC-215ENST00000523799 LTN1O94822 1766 aa12.1□□□□□ -0.47
CCNC-215ENST00000523799 ANKRD36BQ8N2N9 1353 aa12.1□□□□□ -0.47
CCNC-215ENST00000523799 CCNL1Q9UK58 526 aaPredicted RBP12.1□□□□□ -0.47
CCNC-215ENST00000523799 DOT1LQ8TEK3 1739 aa12.1□□□□□ -0.47
CCNC-215ENST00000523799 CICQ96RK0 1608 aaPredicted RBP12.1□□□□□ -0.47
CCNC-215ENST00000523799 IGSF1Q8N6C5 1336 aa12.1□□□□□ -0.47
CCNC-215ENST00000523799 DDX54Q8TDD1 881 aaKnown RBP12.09□□□□□ -0.47
CCNC-215ENST00000523799 SYTL4Q96C24 671 aaPredicted RBP12.09□□□□□ -0.47
CCNC-215ENST00000523799 OCEL1Q9H607 264 aa12.09□□□□□ -0.47
CCNC-215ENST00000523799 C5P01031 1676 aa12.09□□□□□ -0.47
CCNC-215ENST00000523799 SLC34A2O95436 690 aa12.08□□□□□ -0.48
CCNC-215ENST00000523799 PRIM1P49642 420 aaKnown RBP12.08□□□□□ -0.48
CCNC-215ENST00000523799 RBM46Q8TBY0 533 aaKnown RBP12.08□□□□□ -0.48
CCNC-215ENST00000523799 FAM208AQ9UK61 1670 aaKnown RBP12.07□□□□□ -0.48
CCNC-215ENST00000523799 PDCD7Q8N8D1 485 aaKnown RBP12.07□□□□□ -0.48
CCNC-215ENST00000523799 USP54Q70EL1 1684 aa12.06□□□□□ -0.48
CCNC-215ENST00000523799 NSD2O96028 1365 aa12.06□□□□□ -0.48
CCNC-215ENST00000523799 FSTL1Q12841 308 aa12.06□□□□□ -0.48
CCNC-215ENST00000523799 ANKRD24Q8TF21 1146 aa12.06□□□□□ -0.48
CCNC-215ENST00000523799 TAF1LQ8IZX4 1826 aa12.06□□□□□ -0.48
CCNC-215ENST00000523799 EVC2Q86UK5 1308 aa12.06□□□□□ -0.48
CCNC-215ENST00000523799 USP47Q96K76 1375 aa12.05□□□□□ -0.48
CCNC-215ENST00000523799 C16orf71Q8IYS4 520 aaPredicted RBP12.05□□□□□ -0.48
CCNC-215ENST00000523799 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.05□□□□□ -0.482e-6■□□□□ 10.7
CCNC-215ENST00000523799 WWC3Q9ULE0 1092 aa12.04□□□□□ -0.48
CCNC-215ENST00000523799 KTN1Q86UP2 1357 aaKnown RBP12.04□□□□□ -0.48
CCNC-215ENST00000523799 MON2Q7Z3U7 1717 aa12.03□□□□□ -0.48
CCNC-215ENST00000523799 NBPF1Q3BBV0 1214 aa12.03□□□□□ -0.48
CCNC-215ENST00000523799 NMRK2Q9NPI5 230 aa12.03□□□□□ -0.48
CCNC-215ENST00000523799 USP31Q70CQ4 1352 aa12.03□□□□□ -0.48
CCNC-215ENST00000523799 HTRA3P83110 453 aa12.02□□□□□ -0.49
CCNC-215ENST00000523799 NSD3Q9BZ95 1437 aa12.02□□□□□ -0.49
CCNC-215ENST00000523799 ST18O60284 1047 aa12.01□□□□□ -0.49
CCNC-215ENST00000523799 CDAN1Q8IWY9 1227 aa12.01□□□□□ -0.49
CCNC-215ENST00000523799 KIF13BQ9NQT8 1826 aa12.01□□□□□ -0.49
CCNC-215ENST00000523799 UBR3Q6ZT12 1888 aa12.01□□□□□ -0.49
CCNC-215ENST00000523799 C4BP0C0L5 1744 aa12□□□□□ -0.49
CCNC-215ENST00000523799 FBXO22Q8NEZ5 403 aa12□□□□□ -0.49
CCNC-215ENST00000523799 ZCRB1Q8TBF4 217 aaKnown RBP12□□□□□ -0.49
CCNC-215ENST00000523799 MS4A4AQ96JQ5 239 aa12□□□□□ -0.49
CCNC-215ENST00000523799 MFRPQ9BY79 579 aa12□□□□□ -0.49
CCNC-215ENST00000523799 AK7Q96M32 723 aa11.99□□□□□ -0.49
CCNC-215ENST00000523799 RAB3GAP2Q9H2M9 1393 aa11.99□□□□□ -0.49
CCNC-215ENST00000523799 PLEKHG2Q9H7P9 1386 aa11.99□□□□□ -0.49
CCNC-215ENST00000523799 N4BP2Q86UW6 1770 aaPredicted RBP11.98□□□□□ -0.49
CCNC-215ENST00000523799 TOGARAM1Q9Y4F4 1720 aa11.98□□□□□ -0.49
CCNC-215ENST00000523799 C10orf71Q711Q0 1435 aa11.98□□□□□ -0.49
CCNC-215ENST00000523799 KDM2BQ8NHM5 1336 aa11.98□□□□□ -0.49
CCNC-215ENST00000523799 HSPA1AP0DMV8 641 aaKnown RBP11.98□□□□□ -0.49
CCNC-215ENST00000523799 HSPA1BP0DMV9 641 aaKnown RBP11.98□□□□□ -0.49
CCNC-215ENST00000523799 TGFB2P61812 414 aa11.98□□□□□ -0.49
CCNC-215ENST00000523799 NKX1-1Q15270 411 aaPredicted RBP11.98□□□□□ -0.49
CCNC-215ENST00000523799 DPY19L2Q6NUT2 758 aa11.98□□□□□ -0.49
CCNC-215ENST00000523799 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.98□□□□□ -0.49
CCNC-215ENST00000523799 IP6K1Q92551 441 aa11.98□□□□□ -0.49
CCNC-215ENST00000523799 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.98□□□□□ -0.49
CCNC-215ENST00000523799 PKD1L3Q7Z443 1732 aa11.97□□□□□ -0.49
CCNC-215ENST00000523799 KIAA1551Q9HCM1 1747 aa11.97□□□□□ -0.49
CCNC-215ENST00000523799 TNRC6CQ9HCJ0 1690 aaKnown RBP11.97□□□□□ -0.49
CCNC-215ENST00000523799 ARHGAP27Q6ZUM4 889 aa11.97□□□□□ -0.49
CCNC-215ENST00000523799 BCS1LQ9Y276 419 aa11.97□□□□□ -0.49
CCNC-215ENST00000523799 PXDNLA1KZ92 1463 aa11.96□□□□□ -0.49
CCNC-215ENST00000523799 PALLDQ8WX93 1383 aa11.96□□□□□ -0.49
CCNC-215ENST00000523799 BRCA1P38398 1863 aaKnown RBP11.96□□□□□ -0.49
CCNC-215ENST00000523799 CGNL1Q0VF96 1302 aa11.96□□□□□ -0.49
CCNC-215ENST00000523799 ARFGEF1Q9Y6D6 1849 aa11.96□□□□□ -0.49
CCNC-215ENST00000523799 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.96□□□□□ -0.49
CCNC-215ENST00000523799 SSFA2P28290 1259 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms