RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 CICQ96RK0 1608 aaPredicted RBP31.49■■■□□ 2.63
PVT1-218ENST00000523328 KDRP35968 1356 aa31.48■■■□□ 2.63
PVT1-218ENST00000523328 EIF4A2Q14240 407 aaKnown RBP31.48■■■□□ 2.63
PVT1-218ENST00000523328 ZNF831Q5JPB2 1677 aa31.48■■■□□ 2.63
PVT1-218ENST00000523328 PLEKHG2Q9H7P9 1386 aa31.47■■■□□ 2.63
PVT1-218ENST00000523328 MMP10P09238 476 aa31.45■■■□□ 2.63
PVT1-218ENST00000523328 N4BP2Q86UW6 1770 aaPredicted RBP31.44■■■□□ 2.62
PVT1-218ENST00000523328 IFFO2Q5TF58 517 aa31.44■■■□□ 2.62
PVT1-218ENST00000523328 PXDNLA1KZ92 1463 aa31.44■■■□□ 2.62
PVT1-218ENST00000523328 COL5A3P25940 1745 aaPredicted RBP31.44■■■□□ 2.62
PVT1-218ENST00000523328 HSPA6P17066 643 aa31.43■■■□□ 2.62
PVT1-218ENST00000523328 SLC4A9Q96Q91 983 aa31.43■■■□□ 2.62
PVT1-218ENST00000523328 TNNT2P45379 298 aaPredicted RBP31.4■■■□□ 2.62
PVT1-218ENST00000523328 RTCBQ9Y3I0 505 aaKnown RBP31.4■■■□□ 2.62
PVT1-218ENST00000523328 ERVV-2B6SEH9 535 aa31.39■■■□□ 2.62
PVT1-218ENST00000523328 TRAPPC3LQ5T215 181 aa31.39■■■□□ 2.62
PVT1-218ENST00000523328 KIF3CO14782 793 aa31.38■■■□□ 2.61
PVT1-218ENST00000523328 TIMELESSQ9UNS1 1208 aa31.38■■■□□ 2.61
PVT1-218ENST00000523328 MYH14Q7Z406 1995 aaKnown RBP31.37■■■□□ 2.61
PVT1-218ENST00000523328 TRIM26Q12899 539 aaPredicted RBP31.37■■■□□ 2.61
PVT1-218ENST00000523328 C10orf71Q711Q0 1435 aa31.37■■■□□ 2.61
PVT1-218ENST00000523328 TGFB2P61812 414 aa31.36■■■□□ 2.61
PVT1-218ENST00000523328 RC3H1Q5TC82 1133 aaKnown RBP31.36■■■□□ 2.61
PVT1-218ENST00000523328 NLGN1Q8N2Q7 840 aa31.36■■■□□ 2.61
PVT1-218ENST00000523328 DCAF5Q96JK2 942 aa31.36■■■□□ 2.61
PVT1-218ENST00000523328 RBM42Q9BTD8 480 aaKnown RBP31.36■■■□□ 2.61
PVT1-218ENST00000523328 BRCA1P38398 1863 aaKnown RBP31.35■■■□□ 2.61
PVT1-218ENST00000523328 C4AP0C0L4 1744 aa31.35■■■□□ 2.61
PVT1-218ENST00000523328 KDM6AO15550 1401 aaPredicted RBP31.35■■■□□ 2.61
PVT1-218ENST00000523328 ARHGEF1Q92888 912 aaKnown RBP31.35■■■□□ 2.61
PVT1-218ENST00000523328 CNTNAP4Q9C0A0 1308 aa31.34■■■□□ 2.61
PVT1-218ENST00000523328 HSP90AB1P08238 724 aaKnown RBP31.34■■■□□ 2.61
PVT1-218ENST00000523328 ADRA2BP18089 450 aa31.34■■■□□ 2.61
PVT1-218ENST00000523328 POLR3GLQ9BT43 218 aa31.34■■■□□ 2.61
PVT1-218ENST00000523328 A0A0G2JLW4 131 aa31.32■■■□□ 2.6
PVT1-218ENST00000523328 GYS1P13807 737 aa31.32■■■□□ 2.6
PVT1-218ENST00000523328 RPS6KA4O75676 772 aa31.31■■■□□ 2.6
PVT1-218ENST00000523328 PLEKHO1Q53GL0 409 aaPredicted RBP31.31■■■□□ 2.6
PVT1-218ENST00000523328 BCS1LQ9Y276 419 aa31.31■■■□□ 2.6
PVT1-218ENST00000523328 ZNF530Q6P9A1 599 aaPredicted RBP31.29■■■□□ 2.6
PVT1-218ENST00000523328 RFC4P35249 363 aa31.28■■■□□ 2.6
PVT1-218ENST00000523328 CCDC87Q9NVE4 849 aa31.28■■■□□ 2.6
PVT1-218ENST00000523328 DPEP1P16444 411 aa31.27■■■□□ 2.6
PVT1-218ENST00000523328 CABP4P57796 275 aa31.27■■■□□ 2.6
PVT1-218ENST00000523328 AMOTQ4VCS5 1084 aa31.27■■■□□ 2.6
PVT1-218ENST00000523328 ARFGEF1Q9Y6D6 1849 aa31.26■■■□□ 2.59
PVT1-218ENST00000523328 PANK3Q9H999 370 aa31.25■■■□□ 2.59
PVT1-218ENST00000523328 PARP3Q9Y6F1 533 aa31.25■■■□□ 2.59
PVT1-218ENST00000523328 AEBP1Q8IUX7 1158 aa31.24■■■□□ 2.59
PVT1-218ENST00000523328 TJP1Q07157 1748 aa31.24■■■□□ 2.59
PVT1-218ENST00000523328 KCNA3P22001 575 aa31.23■■■□□ 2.59
PVT1-218ENST00000523328 ARHGAP27Q6ZUM4 889 aa31.23■■■□□ 2.59
PVT1-218ENST00000523328 MTHFSP49914 203 aa31.22■■■□□ 2.59
PVT1-218ENST00000523328 PTCD1O75127 700 aaKnown RBP31.21■■■□□ 2.59
PVT1-218ENST00000523328 FCHSD2O94868 740 aa31.21■■■□□ 2.59
PVT1-218ENST00000523328 SCN11AQ9UI33 1791 aa31.2■■■□□ 2.59
PVT1-218ENST00000523328 TOMM70O94826 608 aa31.2■■■□□ 2.59
PVT1-218ENST00000523328 CRKLP46109 303 aaKnown RBP31.2■■■□□ 2.59
PVT1-218ENST00000523328 CLSPNQ9HAW4 1339 aa31.2■■■□□ 2.58
PVT1-218ENST00000523328 NFATC2IPQ8NCF5 419 aa31.19■■■□□ 2.58
PVT1-218ENST00000523328 C1orf141Q5JVX7 400 aa31.18■■■□□ 2.58
PVT1-218ENST00000523328 SRP68Q9UHB9 627 aaKnown RBP31.18■■■□□ 2.58
PVT1-218ENST00000523328 ADAMTS7Q9UKP4 1686 aa31.18■■■□□ 2.58
PVT1-218ENST00000523328 APLP1P51693 650 aa31.17■■■□□ 2.58
PVT1-218ENST00000523328 NMRK2Q9NPI5 230 aa31.17■■■□□ 2.58
PVT1-218ENST00000523328 USP42Q9H9J4 1324 aaKnown RBP31.17■■■□□ 2.58
PVT1-218ENST00000523328 HSPA5P11021 654 aaKnown RBP31.16■■■□□ 2.58
PVT1-218ENST00000523328 EIF4G2P78344 907 aaKnown RBP eCLIP31.16■■■□□ 2.582e-7■■■■■ 34.2
PVT1-218ENST00000523328 DDR1Q08345 913 aa31.15■■■□□ 2.58
PVT1-218ENST00000523328 FKBP8Q14318 412 aa31.15■■■□□ 2.58
PVT1-218ENST00000523328 SULT6B1Q6IMI4 303 aa31.15■■■□□ 2.58
PVT1-218ENST00000523328 MORC1Q86VD1 984 aa31.15■■■□□ 2.58
PVT1-218ENST00000523328 PIM2Q9P1W9 311 aa31.14■■■□□ 2.58
PVT1-218ENST00000523328 C9orf131Q5VYM1 1079 aa31.13■■■□□ 2.57
PVT1-218ENST00000523328 INTS5Q6P9B9 1019 aaKnown RBP31.11■■■□□ 2.57
PVT1-218ENST00000523328 DNAJC5GQ8N7S2 189 aa31.11■■■□□ 2.57
PVT1-218ENST00000523328 VIRMAQ69YN4 1812 aaKnown RBP31.1■■■□□ 2.57
PVT1-218ENST00000523328 IL13P35225 146 aa31.1■■■□□ 2.57
PVT1-218ENST00000523328 SBF1O95248 1867 aa31.1■■■□□ 2.57
PVT1-218ENST00000523328 DALRD3Q5D0E6 543 aaKnown RBP31.09■■■□□ 2.57
PVT1-218ENST00000523328 WDR90Q96KV7 1748 aa31.08■■■□□ 2.57
PVT1-218ENST00000523328 POLRMTO00411 1230 aaKnown RBP31.07■■■□□ 2.56
PVT1-218ENST00000523328 TM4SF1P30408 202 aa31.07■■■□□ 2.56
PVT1-218ENST00000523328 CHRNA5P30532 468 aa31.06■■■□□ 2.56
PVT1-218ENST00000523328 RBM46Q8TBY0 533 aaKnown RBP31.06■■■□□ 2.56
PVT1-218ENST00000523328 AKAP4Q5JQC9 854 aa31.05■■■□□ 2.56
PVT1-218ENST00000523328 DNAJC10Q8IXB1 793 aa31.05■■■□□ 2.56
PVT1-218ENST00000523328 PCGF6Q9BYE7 350 aa31.05■■■□□ 2.56
PVT1-218ENST00000523328 AFDNP55196 1824 aaKnown RBP31.05■■■□□ 2.56
PVT1-218ENST00000523328 KCPQ6ZWJ8 1503 aa31.04■■■□□ 2.56
PVT1-218ENST00000523328 MRC1P22897 1456 aa31.04■■■□□ 2.56
PVT1-218ENST00000523328 SLC52A2Q9HAB3 445 aa31.04■■■□□ 2.56
PVT1-218ENST00000523328 SOS1Q07889 1333 aaPredicted RBP31.03■■■□□ 2.56
PVT1-218ENST00000523328 LGR6Q9HBX8 967 aa31.03■■■□□ 2.56
PVT1-218ENST00000523328 USPL1Q5W0Q7 1092 aa31.02■■■□□ 2.56
PVT1-218ENST00000523328 RNF181Q9P0P0 153 aa31.02■■■□□ 2.56
PVT1-218ENST00000523328 KNSTRNQ9Y448 316 aa31.02■■■□□ 2.56
PVT1-218ENST00000523328 NRXN2Q9P2S2 1712 aa31.01■■■□□ 2.56
PVT1-218ENST00000523328 TNRC6CQ9HCJ0 1690 aaKnown RBP31■■■□□ 2.55
PVT1-218ENST00000523328 ZPR1O75312 459 aa31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms