RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 ZNF784Q8NCA9 323 aaPredicted RBP16.03■□□□□ 0.16
CTNNA1-237ENST00000523275 SSFA2P28290 1259 aa16.02■□□□□ 0.16
CTNNA1-237ENST00000523275 SULT6B1Q6IMI4 303 aa16.02■□□□□ 0.16
CTNNA1-237ENST00000523275 SMIM5Q71RC9 77 aa16.02■□□□□ 0.16
CTNNA1-237ENST00000523275 CD2APQ9Y5K6 639 aa16.02■□□□□ 0.16
CTNNA1-237ENST00000523275 TAF1LQ8IZX4 1826 aa16.02■□□□□ 0.16
CTNNA1-237ENST00000523275 C4BP0C0L5 1744 aa16.02■□□□□ 0.15
CTNNA1-237ENST00000523275 IL13P35225 146 aa16.01■□□□□ 0.15
CTNNA1-237ENST00000523275 MTHFSP49914 203 aa16.01■□□□□ 0.15
CTNNA1-237ENST00000523275 CABP4P57796 275 aa16.01■□□□□ 0.15
CTNNA1-237ENST00000523275 GNPATO15228 680 aa16■□□□□ 0.15
CTNNA1-237ENST00000523275 C1orf141Q5JVX7 400 aa16■□□□□ 0.15
CTNNA1-237ENST00000523275 PIAS4Q8N2W9 510 aaPredicted RBP16■□□□□ 0.15
CTNNA1-237ENST00000523275 RBM42Q9BTD8 480 aaKnown RBP16■□□□□ 0.15
CTNNA1-237ENST00000523275 PER1O15534 1290 aaPredicted RBP15.99■□□□□ 0.15
CTNNA1-237ENST00000523275 GRIN3BO60391 1043 aa15.99■□□□□ 0.15
CTNNA1-237ENST00000523275 SLC4A9Q96Q91 983 aa15.98■□□□□ 0.15
CTNNA1-237ENST00000523275 KDRP35968 1356 aa15.98■□□□□ 0.15
CTNNA1-237ENST00000523275 KDM6AO15550 1401 aaPredicted RBP15.97■□□□□ 0.15
CTNNA1-237ENST00000523275 YBX3P16989 372 aaKnown RBP eCLIP15.97■□□□□ 0.153e-10■□□□□ 9.1
CTNNA1-237ENST00000523275 CC2D1BQ5T0F9 858 aaKnown RBP15.96■□□□□ 0.15
CTNNA1-237ENST00000523275 TRAPPC3LQ5T215 181 aa15.96■□□□□ 0.15
CTNNA1-237ENST00000523275 RC3H1Q5TC82 1133 aaKnown RBP15.96■□□□□ 0.15
CTNNA1-237ENST00000523275 NFATC2IPQ8NCF5 419 aa15.96■□□□□ 0.15
CTNNA1-237ENST00000523275 RTCBQ9Y3I0 505 aaKnown RBP15.96■□□□□ 0.15
CTNNA1-237ENST00000523275 UTRNP46939 3433 aa15.96■□□□□ 0.15
CTNNA1-237ENST00000523275 CHD4Q14839 1912 aa15.96■□□□□ 0.14
CTNNA1-237ENST00000523275 UBR3Q6ZT12 1888 aa15.95■□□□□ 0.14
CTNNA1-237ENST00000523275 PTCD1O75127 700 aaKnown RBP15.94■□□□□ 0.14
CTNNA1-237ENST00000523275 RPS6KA4O75676 772 aa15.93■□□□□ 0.14
CTNNA1-237ENST00000523275 AKAP4Q5JQC9 854 aa15.93■□□□□ 0.14
CTNNA1-237ENST00000523275 NLGN1Q8N2Q7 840 aa15.93■□□□□ 0.14
CTNNA1-237ENST00000523275 CNTNAP4Q9C0A0 1308 aa15.93■□□□□ 0.14
CTNNA1-237ENST00000523275 DIAPH1O60610 1272 aaKnown RBP15.92■□□□□ 0.14
CTNNA1-237ENST00000523275 MMP10P09238 476 aa15.92■□□□□ 0.14
CTNNA1-237ENST00000523275 HMOX1P09601 288 aa15.92■□□□□ 0.14
CTNNA1-237ENST00000523275 ARHGEF1Q92888 912 aaKnown RBP15.92■□□□□ 0.14
CTNNA1-237ENST00000523275 RFC4P35249 363 aa15.91■□□□□ 0.14
CTNNA1-237ENST00000523275 LGR6Q9HBX8 967 aa15.9■□□□□ 0.14
CTNNA1-237ENST00000523275 ZNF831Q5JPB2 1677 aa15.89■□□□□ 0.13
CTNNA1-237ENST00000523275 NPC1L1Q9UHC9 1359 aa15.89■□□□□ 0.13
CTNNA1-237ENST00000523275 CRKLP46109 303 aaKnown RBP15.89■□□□□ 0.13
CTNNA1-237ENST00000523275 CNGB1Q14028 1251 aaPredicted RBP15.89■□□□□ 0.13
CTNNA1-237ENST00000523275 SLC52A2Q9HAB3 445 aa15.89■□□□□ 0.13
CTNNA1-237ENST00000523275 RNMTO43148 476 aaKnown RBP15.88■□□□□ 0.13
CTNNA1-237ENST00000523275 GYS1P13807 737 aa15.88■□□□□ 0.13
CTNNA1-237ENST00000523275 MTHFSDQ2M296 383 aaKnown RBP15.88■□□□□ 0.13
CTNNA1-237ENST00000523275 WWC3Q9ULE0 1092 aa15.87■□□□□ 0.13
CTNNA1-237ENST00000523275 C1QTNF8P60827 252 aa15.86■□□□□ 0.13
CTNNA1-237ENST00000523275 U2SURPO15042 1029 aaKnown RBP15.85■□□□□ 0.13
CTNNA1-237ENST00000523275 TGFB2P61812 414 aa15.85■□□□□ 0.13
CTNNA1-237ENST00000523275 INTS5Q6P9B9 1019 aaKnown RBP15.85■□□□□ 0.13
CTNNA1-237ENST00000523275 DNAJC10Q8IXB1 793 aa15.85■□□□□ 0.13
CTNNA1-237ENST00000523275 CCDC87Q9NVE4 849 aa15.85■□□□□ 0.13
CTNNA1-237ENST00000523275 PARP3Q9Y6F1 533 aa15.85■□□□□ 0.13
CTNNA1-237ENST00000523275 GIGYF1O75420 1035 aaPredicted RBP15.84■□□□□ 0.13
CTNNA1-237ENST00000523275 SLC39A6Q13433 755 aa15.84■□□□□ 0.13
CTNNA1-237ENST00000523275 COL5A3P25940 1745 aaPredicted RBP15.84■□□□□ 0.13
CTNNA1-237ENST00000523275 GOLGB1Q14789 3259 aaKnown RBP15.84■□□□□ 0.13
CTNNA1-237ENST00000523275 SCN11AQ9UI33 1791 aa15.83■□□□□ 0.12
CTNNA1-237ENST00000523275 A0A0G2JLW4 131 aa15.83■□□□□ 0.12
CTNNA1-237ENST00000523275 SRP68Q9UHB9 627 aaKnown RBP15.83■□□□□ 0.12
CTNNA1-237ENST00000523275 MYH14Q7Z406 1995 aaKnown RBP15.82■□□□□ 0.12
CTNNA1-237ENST00000523275 CYP19A1P11511 503 aaPredicted RBP15.82■□□□□ 0.12
CTNNA1-237ENST00000523275 FKBP8Q14318 412 aa15.82■□□□□ 0.12
CTNNA1-237ENST00000523275 USP42Q9H9J4 1324 aaKnown RBP15.82■□□□□ 0.12
CTNNA1-237ENST00000523275 COL3A1P02461 1466 aaPredicted RBP15.81■□□□□ 0.12
CTNNA1-237ENST00000523275 CFAP53Q96M91 514 aa15.81■□□□□ 0.12
CTNNA1-237ENST00000523275 CICQ96RK0 1608 aaPredicted RBP15.81■□□□□ 0.12
CTNNA1-237ENST00000523275 PXDNLA1KZ92 1463 aa15.8■□□□□ 0.12
CTNNA1-237ENST00000523275 MRC1P22897 1456 aa15.8■□□□□ 0.12
CTNNA1-237ENST00000523275 C10orf71Q711Q0 1435 aa15.8■□□□□ 0.12
CTNNA1-237ENST00000523275 ATP10DQ9P241 1426 aa15.8■□□□□ 0.12
CTNNA1-237ENST00000523275 GNAT3A8MTJ3 354 aa15.8■□□□□ 0.12
CTNNA1-237ENST00000523275 ZPR1O75312 459 aa15.8■□□□□ 0.12
CTNNA1-237ENST00000523275 DPEP1P16444 411 aa15.8■□□□□ 0.12
CTNNA1-237ENST00000523275 VSIG10Q8N0Z9 540 aa15.8■□□□□ 0.12
CTNNA1-237ENST00000523275 GAS2L2Q8NHY3 880 aa15.8■□□□□ 0.12
CTNNA1-237ENST00000523275 SOS1Q07889 1333 aaPredicted RBP15.79■□□□□ 0.12
CTNNA1-237ENST00000523275 SENP3-EIF4A1A0A087X0R7 540 aa15.79■□□□□ 0.12
CTNNA1-237ENST00000523275 TTC5Q8N0Z6 440 aa15.79■□□□□ 0.12
CTNNA1-237ENST00000523275 IL17REQ8NFR9 667 aa15.79■□□□□ 0.12
CTNNA1-237ENST00000523275 GPBP1L1Q9HC44 474 aaPredicted RBP15.79■□□□□ 0.12
CTNNA1-237ENST00000523275 BCS1LQ9Y276 419 aa15.79■□□□□ 0.12
CTNNA1-237ENST00000523275 TJP1Q07157 1748 aa15.79■□□□□ 0.12
CTNNA1-237ENST00000523275 TM4SF1P30408 202 aa15.78■□□□□ 0.12
CTNNA1-237ENST00000523275 DDR1Q08345 913 aa15.78■□□□□ 0.12
CTNNA1-237ENST00000523275 TEFQ10587 303 aa15.78■□□□□ 0.12
CTNNA1-237ENST00000523275 USPL1Q5W0Q7 1092 aa15.78■□□□□ 0.12
CTNNA1-237ENST00000523275 NUDCQ9Y266 331 aa15.78■□□□□ 0.12
CTNNA1-237ENST00000523275 C4AP0C0L4 1744 aa15.77■□□□□ 0.12
CTNNA1-237ENST00000523275 ADCY9O60503 1353 aa15.77■□□□□ 0.12
CTNNA1-237ENST00000523275 FCHSD2O94868 740 aa15.77■□□□□ 0.12
CTNNA1-237ENST00000523275 STARD3NLO95772 234 aa15.77■□□□□ 0.12
CTNNA1-237ENST00000523275 PHACTR3Q96KR7 559 aa15.77■□□□□ 0.12
CTNNA1-237ENST00000523275 NARFQ9UHQ1 456 aa15.77■□□□□ 0.12
CTNNA1-237ENST00000523275 ADAMTS7Q9UKP4 1686 aa15.76■□□□□ 0.11
CTNNA1-237ENST00000523275 KIF13BQ9NQT8 1826 aa15.76■□□□□ 0.11
CTNNA1-237ENST00000523275 POLRMTO00411 1230 aaKnown RBP15.76■□□□□ 0.11
CTNNA1-237ENST00000523275 KCNA3P22001 575 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms