RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 FOXR1Q6PIV2 292 aa9.62□□□□□ -0.87
CTHRC1-204ENST00000520880 ALG2Q9H553 416 aa9.62□□□□□ -0.87
CTHRC1-204ENST00000520880 GPAMQ9HCL2 828 aa9.62□□□□□ -0.87
CTHRC1-204ENST00000520880 ARHGEF15O94989 841 aa9.61□□□□□ -0.87
CTHRC1-204ENST00000520880 TLR1Q15399 786 aa9.61□□□□□ -0.87
CTHRC1-204ENST00000520880 GNASQ5JWF2 1037 aa9.61□□□□□ -0.87
CTHRC1-204ENST00000520880 LYPD4Q6UWN0 246 aa9.61□□□□□ -0.87
CTHRC1-204ENST00000520880 NUCKS1Q9H1E3 243 aaKnown RBP9.61□□□□□ -0.87
CTHRC1-204ENST00000520880 MBIPQ9NS73 344 aa9.61□□□□□ -0.87
CTHRC1-204ENST00000520880 A0A1B0GTH6 734 aa9.6□□□□□ -0.87
CTHRC1-204ENST00000520880 INHAP05111 366 aa9.6□□□□□ -0.87
CTHRC1-204ENST00000520880 GSK3AP49840 483 aa9.6□□□□□ -0.87
CTHRC1-204ENST00000520880 GDF10P55107 478 aa9.6□□□□□ -0.87
CTHRC1-204ENST00000520880 PPARGC1BQ86YN6 1023 aaKnown RBP9.6□□□□□ -0.87
CTHRC1-204ENST00000520880 GTF2E1P29083 439 aaPredicted RBP9.59□□□□□ -0.87
CTHRC1-204ENST00000520880 RHBDD1Q8TEB9 315 aa9.59□□□□□ -0.87
CTHRC1-204ENST00000520880 KCNMA1Q12791 1236 aa9.58□□□□□ -0.88
CTHRC1-204ENST00000520880 FLIIQ13045 1269 aa9.58□□□□□ -0.88
CTHRC1-204ENST00000520880 TRERF1Q96PN7 1200 aa9.58□□□□□ -0.88
CTHRC1-204ENST00000520880 IGF1RP08069 1367 aa9.58□□□□□ -0.88
CTHRC1-204ENST00000520880 TMEM229AB2RXF0 380 aa9.57□□□□□ -0.88
CTHRC1-204ENST00000520880 RAD21O60216 631 aa9.57□□□□□ -0.88
CTHRC1-204ENST00000520880 CELA2BP08218 269 aaPredicted RBP9.57□□□□□ -0.88
CTHRC1-204ENST00000520880 UBTFP17480 764 aaKnown RBP9.57□□□□□ -0.88
CTHRC1-204ENST00000520880 RUBCNLQ9H714 662 aa9.57□□□□□ -0.88
CTHRC1-204ENST00000520880 PCDHGA11Q9Y5H2 935 aa9.57□□□□□ -0.88
CTHRC1-204ENST00000520880 POM121CA8CG34 1229 aa9.56□□□□□ -0.88
CTHRC1-204ENST00000520880 SKIP12755 728 aa9.56□□□□□ -0.88
CTHRC1-204ENST00000520880 MSX1P28360 303 aa9.56□□□□□ -0.88
CTHRC1-204ENST00000520880 UBAP2LQ14157 1087 aaKnown RBP9.56□□□□□ -0.88
CTHRC1-204ENST00000520880 WWC1Q8IX03 1113 aa9.56□□□□□ -0.88
CTHRC1-204ENST00000520880 MX2P20592 715 aa9.55□□□□□ -0.88
CTHRC1-204ENST00000520880 SMTNP53814 917 aa9.55□□□□□ -0.88
CTHRC1-204ENST00000520880 ADAMTS19Q8TE59 1207 aa9.55□□□□□ -0.88
CTHRC1-204ENST00000520880 SERTAD1Q9UHV2 236 aa9.55□□□□□ -0.88
CTHRC1-204ENST00000520880 PLA2G4AP47712 749 aa9.54□□□□□ -0.88
CTHRC1-204ENST00000520880 EML3Q32P44 896 aa9.54□□□□□ -0.88
CTHRC1-204ENST00000520880 NFATC2IPQ8NCF5 419 aa9.54□□□□□ -0.88
CTHRC1-204ENST00000520880 CSB-PGBD3P0DP91 1061 aa9.53□□□□□ -0.88
CTHRC1-204ENST00000520880 MAP3K10Q02779 954 aa9.53□□□□□ -0.88
CTHRC1-204ENST00000520880 NCOA4Q13772 614 aa9.53□□□□□ -0.88
CTHRC1-204ENST00000520880 DEPDC4Q8N2C3 294 aa9.53□□□□□ -0.88
CTHRC1-204ENST00000520880 PGBD3Q8N328 593 aa9.53□□□□□ -0.88
CTHRC1-204ENST00000520880 ACDQ96AP0 544 aa9.53□□□□□ -0.88
CTHRC1-204ENST00000520880 SLC4A9Q96Q91 983 aa9.53□□□□□ -0.88
CTHRC1-204ENST00000520880 RASSF7Q02833 373 aa9.52□□□□□ -0.89
CTHRC1-204ENST00000520880 ZNF295-AS1Q8N0V1 137 aa9.52□□□□□ -0.89
CTHRC1-204ENST00000520880 CFHR5Q9BXR6 569 aa9.52□□□□□ -0.89
CTHRC1-204ENST00000520880 IQSEC3Q9UPP2 1182 aaPredicted RBP9.52□□□□□ -0.89
CTHRC1-204ENST00000520880 NOD1Q9Y239 953 aa9.52□□□□□ -0.89
CTHRC1-204ENST00000520880 USP3Q9Y6I4 520 aa9.52□□□□□ -0.89
CTHRC1-204ENST00000520880 A6NJY4 79 aa9.51□□□□□ -0.89
CTHRC1-204ENST00000520880 USP17L5A8MUK1 530 aa9.51□□□□□ -0.89
CTHRC1-204ENST00000520880 RNF225M0QZC1 329 aaPredicted RBP9.51□□□□□ -0.89
CTHRC1-204ENST00000520880 ATP4AP20648 1035 aa9.51□□□□□ -0.89
CTHRC1-204ENST00000520880 GTF2IP78347 998 aa9.51□□□□□ -0.89
CTHRC1-204ENST00000520880 LBRQ14739 615 aaKnown RBP9.51□□□□□ -0.89
CTHRC1-204ENST00000520880 MTFR1Q15390 333 aa9.51□□□□□ -0.89
CTHRC1-204ENST00000520880 TBC1D9Q6ZT07 1266 aa9.51□□□□□ -0.89
CTHRC1-204ENST00000520880 NIFKQ9BYG3 293 aaKnown RBP9.51□□□□□ -0.89
CTHRC1-204ENST00000520880 CRISPLD1Q9H336 500 aa9.51□□□□□ -0.89
CTHRC1-204ENST00000520880 LZTS3O60299 673 aaPredicted RBP9.5□□□□□ -0.89
CTHRC1-204ENST00000520880 BCRP11274 1271 aa9.5□□□□□ -0.89
CTHRC1-204ENST00000520880 MARSP56192 900 aaKnown RBP9.5□□□□□ -0.89
CTHRC1-204ENST00000520880 TMEM132AQ24JP5 1023 aa9.5□□□□□ -0.89
CTHRC1-204ENST00000520880 EFHC2Q5JST6 749 aa9.5□□□□□ -0.89
CTHRC1-204ENST00000520880 NSFL1CQ9UNZ2 370 aaKnown RBP9.5□□□□□ -0.89
CTHRC1-204ENST00000520880 GDF11O95390 407 aa9.49□□□□□ -0.89
CTHRC1-204ENST00000520880 HDGFL1Q5TGJ6 251 aa9.49□□□□□ -0.89
CTHRC1-204ENST00000520880 TMEM151AQ8N4L1 468 aa9.49□□□□□ -0.89
CTHRC1-204ENST00000520880 UCN2Q96RP3 112 aa9.49□□□□□ -0.89
CTHRC1-204ENST00000520880 PHF24Q9UPV7 400 aa9.49□□□□□ -0.89
CTHRC1-204ENST00000520880 CDK2AP1O14519 115 aa9.48□□□□□ -0.89
CTHRC1-204ENST00000520880 IRS1P35568 1242 aa9.48□□□□□ -0.89
CTHRC1-204ENST00000520880 PSME1Q06323 249 aa9.48□□□□□ -0.89
CTHRC1-204ENST00000520880 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.48□□□□□ -0.89
CTHRC1-204ENST00000520880 AIDAQ96BJ3 306 aa9.48□□□□□ -0.89
CTHRC1-204ENST00000520880 ABHD17AQ96GS6 310 aa9.48□□□□□ -0.89
CTHRC1-204ENST00000520880 ENAMQ9NRM1 1142 aa9.48□□□□□ -0.89
CTHRC1-204ENST00000520880 NDFIP2Q9NV92 336 aa9.48□□□□□ -0.89
CTHRC1-204ENST00000520880 DNAAF2Q9NVR5 837 aaKnown RBP9.48□□□□□ -0.89
CTHRC1-204ENST00000520880 ZNF358Q9NW07 568 aa9.48□□□□□ -0.89
CTHRC1-204ENST00000520880 BNIP3LO60238 219 aa9.47□□□□□ -0.89
CTHRC1-204ENST00000520880 KCTD17Q8N5Z5 321 aa9.47□□□□□ -0.89
CTHRC1-204ENST00000520880 CLUAP1Q96AJ1 413 aa9.47□□□□□ -0.89
CTHRC1-204ENST00000520880 ATXN7L1Q9ULK2 861 aaPredicted RBP9.47□□□□□ -0.89
CTHRC1-204ENST00000520880 MAP2K3P46734 347 aa9.46□□□□□ -0.9
CTHRC1-204ENST00000520880 C1orf216Q8TAB5 229 aa9.46□□□□□ -0.9
CTHRC1-204ENST00000520880 SCARF2Q96GP6 870 aaPredicted RBP9.46□□□□□ -0.9
CTHRC1-204ENST00000520880 OXCT2Q9BYC2 517 aaPredicted RBP9.46□□□□□ -0.9
CTHRC1-204ENST00000520880 USP17L3A6NCW0 530 aa9.45□□□□□ -0.9
CTHRC1-204ENST00000520880 USP17L4A6NCW7 530 aa9.45□□□□□ -0.9
CTHRC1-204ENST00000520880 C2CD2LO14523 706 aa9.45□□□□□ -0.9
CTHRC1-204ENST00000520880 BACH1O14867 736 aa9.45□□□□□ -0.9
CTHRC1-204ENST00000520880 OIP5O43482 229 aa9.45□□□□□ -0.9
CTHRC1-204ENST00000520880 USP17L2Q6R6M4 530 aa9.45□□□□□ -0.9
CTHRC1-204ENST00000520880 USP17L1Q7RTZ2 530 aa9.45□□□□□ -0.9
CTHRC1-204ENST00000520880 KLRG1Q96E93 195 aa9.45□□□□□ -0.9
CTHRC1-204ENST00000520880 ZCCHC2Q9C0B9 1178 aaKnown RBP9.45□□□□□ -0.9
CTHRC1-204ENST00000520880 LRRC4BQ9NT99 713 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms