RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 UBR3Q6ZT12 1888 aa20.73■□□□□ 0.91
CSMD1-207ENST00000520451 SSFA2P28290 1259 aa20.72■□□□□ 0.91
CSMD1-207ENST00000520451 AEBP1Q8IUX7 1158 aa20.72■□□□□ 0.91
CSMD1-207ENST00000520451 DCAF5Q96JK2 942 aa20.72■□□□□ 0.91
CSMD1-207ENST00000520451 ERVV-2B6SEH9 535 aa20.71■□□□□ 0.91
CSMD1-207ENST00000520451 GNPATO15228 680 aa20.71■□□□□ 0.91
CSMD1-207ENST00000520451 AMOTQ4VCS5 1084 aa20.71■□□□□ 0.91
CSMD1-207ENST00000520451 YBX3P16989 372 aaKnown RBP eCLIP20.7■□□□□ 0.9
CSMD1-207ENST00000520451 CD2APQ9Y5K6 639 aa20.7■□□□□ 0.9
CSMD1-207ENST00000520451 KIF7Q2M1P5 1343 aa20.7■□□□□ 0.9
CSMD1-207ENST00000520451 AMER1Q5JTC6 1135 aaPredicted RBP20.69■□□□□ 0.9
CSMD1-207ENST00000520451 KDRP35968 1356 aa20.69■□□□□ 0.9
CSMD1-207ENST00000520451 KDM6AO15550 1401 aaPredicted RBP20.69■□□□□ 0.9
CSMD1-207ENST00000520451 SULT6B1Q6IMI4 303 aa20.68■□□□□ 0.9
CSMD1-207ENST00000520451 RBM42Q9BTD8 480 aaKnown RBP20.68■□□□□ 0.9
CSMD1-207ENST00000520451 GRIN3BO60391 1043 aa20.67■□□□□ 0.9
CSMD1-207ENST00000520451 CABP4P57796 275 aa20.67■□□□□ 0.9
CSMD1-207ENST00000520451 C1orf141Q5JVX7 400 aa20.67■□□□□ 0.9
CSMD1-207ENST00000520451 IL13P35225 146 aa20.66■□□□□ 0.9
CSMD1-207ENST00000520451 MTHFSP49914 203 aa20.66■□□□□ 0.9
CSMD1-207ENST00000520451 SLC4A9Q96Q91 983 aa20.65■□□□□ 0.9
CSMD1-207ENST00000520451 RTCBQ9Y3I0 505 aaKnown RBP20.63■□□□□ 0.89
CSMD1-207ENST00000520451 ZNF831Q5JPB2 1677 aa20.62■□□□□ 0.89
CSMD1-207ENST00000520451 TRAPPC3LQ5T215 181 aa20.61■□□□□ 0.89
CSMD1-207ENST00000520451 RC3H1Q5TC82 1133 aaKnown RBP20.61■□□□□ 0.89
CSMD1-207ENST00000520451 NFATC2IPQ8NCF5 419 aa20.61■□□□□ 0.89
CSMD1-207ENST00000520451 CNTNAP4Q9C0A0 1308 aa20.6■□□□□ 0.89
CSMD1-207ENST00000520451 PTCD1O75127 700 aaKnown RBP20.6■□□□□ 0.89
CSMD1-207ENST00000520451 MMP10P09238 476 aa20.6■□□□□ 0.89
CSMD1-207ENST00000520451 CC2D1BQ5T0F9 858 aaKnown RBP20.59■□□□□ 0.89
CSMD1-207ENST00000520451 WWC3Q9ULE0 1092 aa20.59■□□□□ 0.89
CSMD1-207ENST00000520451 COL5A3P25940 1745 aaPredicted RBP20.58■□□□□ 0.89
CSMD1-207ENST00000520451 PER1O15534 1290 aaPredicted RBP20.58■□□□□ 0.89
CSMD1-207ENST00000520451 ADRA2BP18089 450 aa20.58■□□□□ 0.89
CSMD1-207ENST00000520451 RPS6KA4O75676 772 aa20.57■□□□□ 0.88
CSMD1-207ENST00000520451 HMOX1P09601 288 aa20.57■□□□□ 0.88
CSMD1-207ENST00000520451 C1QTNF8P60827 252 aa20.57■□□□□ 0.88
CSMD1-207ENST00000520451 AKAP4Q5JQC9 854 aa20.57■□□□□ 0.88
CSMD1-207ENST00000520451 ARHGEF1Q92888 912 aaKnown RBP20.57■□□□□ 0.88
CSMD1-207ENST00000520451 GIGYF1O75420 1035 aaPredicted RBP20.56■□□□□ 0.88
CSMD1-207ENST00000520451 RFC4P35249 363 aa20.56■□□□□ 0.88
CSMD1-207ENST00000520451 NLGN1Q8N2Q7 840 aa20.56■□□□□ 0.88
CSMD1-207ENST00000520451 SCN11AQ9UI33 1791 aa20.54■□□□□ 0.88
CSMD1-207ENST00000520451 CICQ96RK0 1608 aaPredicted RBP20.54■□□□□ 0.88
CSMD1-207ENST00000520451 DIAPH1O60610 1272 aaKnown RBP20.54■□□□□ 0.88
CSMD1-207ENST00000520451 GYS1P13807 737 aa20.54■□□□□ 0.88
CSMD1-207ENST00000520451 CRKLP46109 303 aaKnown RBP20.54■□□□□ 0.88
CSMD1-207ENST00000520451 CNGB1Q14028 1251 aaPredicted RBP20.53■□□□□ 0.88
CSMD1-207ENST00000520451 SLC52A2Q9HAB3 445 aa20.53■□□□□ 0.88
CSMD1-207ENST00000520451 LGR6Q9HBX8 967 aa20.53■□□□□ 0.88
CSMD1-207ENST00000520451 ATP10DQ9P241 1426 aa20.53■□□□□ 0.88
CSMD1-207ENST00000520451 MYH14Q7Z406 1995 aaKnown RBP20.52■□□□□ 0.88
CSMD1-207ENST00000520451 PXDNLA1KZ92 1463 aa20.51■□□□□ 0.87
CSMD1-207ENST00000520451 TJP1Q07157 1748 aa20.51■□□□□ 0.87
CSMD1-207ENST00000520451 SENP3-EIF4A1A0A087X0R7 540 aa20.51■□□□□ 0.87
CSMD1-207ENST00000520451 RNMTO43148 476 aaKnown RBP20.51■□□□□ 0.87
CSMD1-207ENST00000520451 C10orf71Q711Q0 1435 aa20.51■□□□□ 0.87
CSMD1-207ENST00000520451 MRC1P22897 1456 aa20.5■□□□□ 0.87
CSMD1-207ENST00000520451 C4AP0C0L4 1744 aa20.5■□□□□ 0.87
CSMD1-207ENST00000520451 NPC1L1Q9UHC9 1359 aa20.5■□□□□ 0.87
CSMD1-207ENST00000520451 MTHFSDQ2M296 383 aaKnown RBP20.5■□□□□ 0.87
CSMD1-207ENST00000520451 CCDC87Q9NVE4 849 aa20.5■□□□□ 0.87
CSMD1-207ENST00000520451 PARP3Q9Y6F1 533 aa20.5■□□□□ 0.87
CSMD1-207ENST00000520451 TGFB2P61812 414 aa20.49■□□□□ 0.87
CSMD1-207ENST00000520451 SRP68Q9UHB9 627 aaKnown RBP20.49■□□□□ 0.87
CSMD1-207ENST00000520451 KIF13BQ9NQT8 1826 aa20.48■□□□□ 0.87
CSMD1-207ENST00000520451 ADCY9O60503 1353 aa20.48■□□□□ 0.87
CSMD1-207ENST00000520451 SLC39A6Q13433 755 aa20.48■□□□□ 0.87
CSMD1-207ENST00000520451 INTS5Q6P9B9 1019 aaKnown RBP20.48■□□□□ 0.87
CSMD1-207ENST00000520451 DNAJC10Q8IXB1 793 aa20.48■□□□□ 0.87
CSMD1-207ENST00000520451 COL3A1P02461 1466 aaPredicted RBP20.48■□□□□ 0.87
CSMD1-207ENST00000520451 USP42Q9H9J4 1324 aaKnown RBP20.48■□□□□ 0.87
CSMD1-207ENST00000520451 A0A0G2JLW4 131 aa20.47■□□□□ 0.87
CSMD1-207ENST00000520451 U2SURPO15042 1029 aaKnown RBP20.47■□□□□ 0.87
CSMD1-207ENST00000520451 KIAA1551Q9HCM1 1747 aa20.46■□□□□ 0.87
CSMD1-207ENST00000520451 N4BP2Q86UW6 1770 aaPredicted RBP20.45■□□□□ 0.86
CSMD1-207ENST00000520451 FKBP8Q14318 412 aa20.45■□□□□ 0.86
CSMD1-207ENST00000520451 ZNF526Q8TF50 670 aaPredicted RBP20.45■□□□□ 0.86
CSMD1-207ENST00000520451 GPBP1L1Q9HC44 474 aaPredicted RBP20.45■□□□□ 0.86
CSMD1-207ENST00000520451 BCS1LQ9Y276 419 aa20.45■□□□□ 0.86
CSMD1-207ENST00000520451 KCPQ6ZWJ8 1503 aa20.44■□□□□ 0.86
CSMD1-207ENST00000520451 DPEP1P16444 411 aa20.44■□□□□ 0.86
CSMD1-207ENST00000520451 ADAMTS7Q9UKP4 1686 aa20.44■□□□□ 0.86
CSMD1-207ENST00000520451 CYP19A1P11511 503 aaPredicted RBP20.43■□□□□ 0.86
CSMD1-207ENST00000520451 SOS1Q07889 1333 aaPredicted RBP20.43■□□□□ 0.86
CSMD1-207ENST00000520451 VIRMAQ69YN4 1812 aaKnown RBP20.42■□□□□ 0.86
CSMD1-207ENST00000520451 ZPR1O75312 459 aa20.42■□□□□ 0.86
CSMD1-207ENST00000520451 DDR1Q08345 913 aa20.42■□□□□ 0.86
CSMD1-207ENST00000520451 GAS2L2Q8NHY3 880 aa20.41■□□□□ 0.86
CSMD1-207ENST00000520451 FCHSD2O94868 740 aa20.4■□□□□ 0.86
CSMD1-207ENST00000520451 USPL1Q5W0Q7 1092 aa20.4■□□□□ 0.86
CSMD1-207ENST00000520451 TTC5Q8N0Z6 440 aa20.4■□□□□ 0.86
CSMD1-207ENST00000520451 VSIG10Q8N0Z9 540 aa20.4■□□□□ 0.86
CSMD1-207ENST00000520451 ZBTB1Q9Y2K1 713 aa20.4■□□□□ 0.86
CSMD1-207ENST00000520451 COL15A1P39059 1388 aa20.39■□□□□ 0.85
CSMD1-207ENST00000520451 GNAT3A8MTJ3 354 aa20.39■□□□□ 0.85
CSMD1-207ENST00000520451 ARHGAP27Q6ZUM4 889 aa20.39■□□□□ 0.85
CSMD1-207ENST00000520451 CFAP53Q96M91 514 aa20.39■□□□□ 0.85
CSMD1-207ENST00000520451 POLRMTO00411 1230 aaKnown RBP20.38■□□□□ 0.85
CSMD1-207ENST00000520451 KCNA3P22001 575 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms