RNA–Protein interactions for RNA: ENST00000520204.5

FAM49B-216, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5

Gene FAM49B, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-216ENST00000520204 HSP90AB1P08238 724 aaKnown RBP22.28■■□□□ 1.16
FAM49B-216ENST00000520204 ATG3Q9NT62 314 aa22.28■■□□□ 1.16
FAM49B-216ENST00000520204 ATP6V1AP38606 617 aa22.27■■□□□ 1.16
FAM49B-216ENST00000520204 AMOTQ4VCS5 1084 aa22.27■■□□□ 1.16
FAM49B-216ENST00000520204 AMIGO3Q86WK7 504 aa22.27■■□□□ 1.16
FAM49B-216ENST00000520204 LINC00116Q8NCU8 138 aa22.27■■□□□ 1.16
FAM49B-216ENST00000520204 DCAF5Q96JK2 942 aa22.27■■□□□ 1.16
FAM49B-216ENST00000520204 CHD4Q14839 1912 aa22.27■■□□□ 1.16
FAM49B-216ENST00000520204 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.26■■□□□ 1.15
FAM49B-216ENST00000520204 PHF14O94880 888 aa22.26■■□□□ 1.15
FAM49B-216ENST00000520204 SSFA2P28290 1259 aa22.26■■□□□ 1.15
FAM49B-216ENST00000520204 CD2APQ9Y5K6 639 aa22.26■■□□□ 1.15
FAM49B-216ENST00000520204 ITPK1Q13572 414 aa22.25■■□□□ 1.15
FAM49B-216ENST00000520204 SMIM5Q71RC9 77 aa22.25■■□□□ 1.15
FAM49B-216ENST00000520204 ZNF530Q6P9A1 599 aaPredicted RBP22.24■■□□□ 1.15
FAM49B-216ENST00000520204 KDRP35968 1356 aa22.24■■□□□ 1.15
FAM49B-216ENST00000520204 GRIN3BO60391 1043 aa22.23■■□□□ 1.15
FAM49B-216ENST00000520204 GNPATO15228 680 aa22.22■■□□□ 1.15
FAM49B-216ENST00000520204 HMOX1P09601 288 aa22.22■■□□□ 1.15
FAM49B-216ENST00000520204 YBX3P16989 372 aaKnown RBP eCLIP22.21■■□□□ 1.15
FAM49B-216ENST00000520204 CABP4P57796 275 aa22.21■■□□□ 1.15
FAM49B-216ENST00000520204 UBR3Q6ZT12 1888 aa22.21■■□□□ 1.15
FAM49B-216ENST00000520204 C1orf141Q5JVX7 400 aa22.2■■□□□ 1.14
FAM49B-216ENST00000520204 RBM42Q9BTD8 480 aaKnown RBP22.2■■□□□ 1.14
FAM49B-216ENST00000520204 PPP2R1AP30153 589 aa22.19■■□□□ 1.14
FAM49B-216ENST00000520204 CFAP53Q96M91 514 aa22.19■■□□□ 1.14
FAM49B-216ENST00000520204 U2SURPO15042 1029 aaKnown RBP22.18■■□□□ 1.14
FAM49B-216ENST00000520204 SLC4A9Q96Q91 983 aa22.18■■□□□ 1.14
FAM49B-216ENST00000520204 GOLGB1Q14789 3259 aaKnown RBP22.18■■□□□ 1.14
FAM49B-216ENST00000520204 RC3H1Q5TC82 1133 aaKnown RBP22.17■■□□□ 1.14
FAM49B-216ENST00000520204 RTCBQ9Y3I0 505 aaKnown RBP22.17■■□□□ 1.14
FAM49B-216ENST00000520204 KDM6AO15550 1401 aaPredicted RBP22.16■■□□□ 1.14
FAM49B-216ENST00000520204 TRAPPC3LQ5T215 181 aa22.16■■□□□ 1.14
FAM49B-216ENST00000520204 ZEB1P37275 1124 aaPredicted RBP22.15■■□□□ 1.14
FAM49B-216ENST00000520204 COL3A1P02461 1466 aaPredicted RBP22.15■■□□□ 1.14
FAM49B-216ENST00000520204 DDX10Q13206 875 aaKnown RBP22.14■■□□□ 1.13
FAM49B-216ENST00000520204 AKAP4Q5JQC9 854 aa22.14■■□□□ 1.13
FAM49B-216ENST00000520204 NFATC2IPQ8NCF5 419 aa22.14■■□□□ 1.13
FAM49B-216ENST00000520204 NUDCQ9Y266 331 aa22.13■■□□□ 1.13
FAM49B-216ENST00000520204 CNTNAP4Q9C0A0 1308 aa22.12■■□□□ 1.13
FAM49B-216ENST00000520204 ZNF831Q5JPB2 1677 aa22.12■■□□□ 1.13
FAM49B-216ENST00000520204 ADRA2BP18089 450 aa22.12■■□□□ 1.13
FAM49B-216ENST00000520204 MTHFSDQ2M296 383 aaKnown RBP22.12■■□□□ 1.13
FAM49B-216ENST00000520204 NLGN1Q8N2Q7 840 aa22.12■■□□□ 1.13
FAM49B-216ENST00000520204 PTCD1O75127 700 aaKnown RBP22.11■■□□□ 1.13
FAM49B-216ENST00000520204 RPS6KA4O75676 772 aa22.11■■□□□ 1.13
FAM49B-216ENST00000520204 MMP10P09238 476 aa22.11■■□□□ 1.13
FAM49B-216ENST00000520204 ARHGEF1Q92888 912 aaKnown RBP22.11■■□□□ 1.13
FAM49B-216ENST00000520204 RFC4P35249 363 aa22.09■■□□□ 1.13
FAM49B-216ENST00000520204 C1QTNF8P60827 252 aa22.09■■□□□ 1.13
FAM49B-216ENST00000520204 LGR6Q9HBX8 967 aa22.09■■□□□ 1.13
FAM49B-216ENST00000520204 U2AF1L5P0DN76 240 aaPredicted RBP22.07■■□□□ 1.12
FAM49B-216ENST00000520204 U2AF1Q01081 240 aaKnown RBP eCLIP22.07■■□□□ 1.12
FAM49B-216ENST00000520204 RNMTO43148 476 aaKnown RBP22.06■■□□□ 1.12
FAM49B-216ENST00000520204 GIGYF1O75420 1035 aaPredicted RBP22.05■■□□□ 1.12
FAM49B-216ENST00000520204 GYS1P13807 737 aa22.05■■□□□ 1.12
FAM49B-216ENST00000520204 CRKLP46109 303 aaKnown RBP22.05■■□□□ 1.12
FAM49B-216ENST00000520204 GAS2L2Q8NHY3 880 aa22.05■■□□□ 1.12
FAM49B-216ENST00000520204 RSPH6AQ9H0K4 717 aa22.05■■□□□ 1.12
FAM49B-216ENST00000520204 SLC52A2Q9HAB3 445 aa22.05■■□□□ 1.12
FAM49B-216ENST00000520204 COL5A3P25940 1745 aaPredicted RBP22.04■■□□□ 1.12
FAM49B-216ENST00000520204 PRKAR2BP31323 418 aa22.04■■□□□ 1.12
FAM49B-216ENST00000520204 WWC3Q9ULE0 1092 aa22.04■■□□□ 1.12
FAM49B-216ENST00000520204 TGFB2P61812 414 aa22.03■■□□□ 1.12
FAM49B-216ENST00000520204 RALBP1Q15311 655 aa22.03■■□□□ 1.12
FAM49B-216ENST00000520204 PHACTR3Q96KR7 559 aa22.03■■□□□ 1.12
FAM49B-216ENST00000520204 SCN11AQ9UI33 1791 aa22.02■■□□□ 1.12
FAM49B-216ENST00000520204 FCHSD2O94868 740 aa22.02■■□□□ 1.12
FAM49B-216ENST00000520204 PARP3Q9Y6F1 533 aa22.02■■□□□ 1.12
FAM49B-216ENST00000520204 MYH14Q7Z406 1995 aaKnown RBP22.01■■□□□ 1.11
FAM49B-216ENST00000520204 CCDC87Q9NVE4 849 aa22.01■■□□□ 1.11
FAM49B-216ENST00000520204 GNAT3A8MTJ3 354 aa22■■□□□ 1.11
FAM49B-216ENST00000520204 INTS5Q6P9B9 1019 aaKnown RBP22■■□□□ 1.11
FAM49B-216ENST00000520204 ATP10DQ9P241 1426 aa21.99■■□□□ 1.11
FAM49B-216ENST00000520204 SENP3-EIF4A1A0A087X0R7 540 aa21.99■■□□□ 1.11
FAM49B-216ENST00000520204 IL17REQ8NFR9 667 aa21.99■■□□□ 1.11
FAM49B-216ENST00000520204 CICQ96RK0 1608 aaPredicted RBP21.98■■□□□ 1.11
FAM49B-216ENST00000520204 A0A0G2JLW4 131 aa21.98■■□□□ 1.11
FAM49B-216ENST00000520204 SLC39A6Q13433 755 aa21.98■■□□□ 1.11
FAM49B-216ENST00000520204 DNAJC10Q8IXB1 793 aa21.98■■□□□ 1.11
FAM49B-216ENST00000520204 SRP68Q9UHB9 627 aaKnown RBP21.98■■□□□ 1.11
FAM49B-216ENST00000520204 PXDNLA1KZ92 1463 aa21.97■■□□□ 1.11
FAM49B-216ENST00000520204 USP42Q9H9J4 1324 aaKnown RBP21.97■■□□□ 1.11
FAM49B-216ENST00000520204 C10orf71Q711Q0 1435 aa21.97■■□□□ 1.11
FAM49B-216ENST00000520204 FKBP8Q14318 412 aa21.96■■□□□ 1.11
FAM49B-216ENST00000520204 GPBP1L1Q9HC44 474 aaPredicted RBP21.96■■□□□ 1.11
FAM49B-216ENST00000520204 KIF13BQ9NQT8 1826 aa21.96■■□□□ 1.11
FAM49B-216ENST00000520204 MRC1P22897 1456 aa21.96■■□□□ 1.11
FAM49B-216ENST00000520204 C4AP0C0L4 1744 aa21.95■■□□□ 1.1
FAM49B-216ENST00000520204 TJP1Q07157 1748 aa21.95■■□□□ 1.1
FAM49B-216ENST00000520204 CYP19A1P11511 503 aaPredicted RBP21.95■■□□□ 1.1
FAM49B-216ENST00000520204 DPEP1P16444 411 aa21.95■■□□□ 1.1
FAM49B-216ENST00000520204 TEFQ10587 303 aa21.95■■□□□ 1.1
FAM49B-216ENST00000520204 BCS1LQ9Y276 419 aa21.95■■□□□ 1.1
FAM49B-216ENST00000520204 ADCY9O60503 1353 aa21.95■■□□□ 1.1
FAM49B-216ENST00000520204 ZPR1O75312 459 aa21.94■■□□□ 1.1
FAM49B-216ENST00000520204 VSIG10Q8N0Z9 540 aa21.93■■□□□ 1.1
FAM49B-216ENST00000520204 SOS1Q07889 1333 aaPredicted RBP21.92■■□□□ 1.1
FAM49B-216ENST00000520204 MYBBP1AQ9BQG0 1328 aaKnown RBP21.92■■□□□ 1.1
FAM49B-216ENST00000520204 TM4SF1P30408 202 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms