RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 SMCPP49901 116 aaPredicted RBP8.26□□□□□ -1.09
SQLE-202ENST00000518604 HINFPQ9BQA5 517 aa8.26□□□□□ -1.09
SQLE-202ENST00000518604 ARHGEF10LQ9HCE6 1279 aa8.26□□□□□ -1.09
SQLE-202ENST00000518604 UPP2O95045 317 aa8.25□□□□□ -1.09
SQLE-202ENST00000518604 PKDCCQ504Y2 493 aa8.25□□□□□ -1.09
SQLE-202ENST00000518604 GAS2L2Q8NHY3 880 aa8.25□□□□□ -1.09
SQLE-202ENST00000518604 CNKSR1Q969H4 720 aa8.25□□□□□ -1.09
SQLE-202ENST00000518604 IL2RAP01589 272 aa8.24□□□□□ -1.09
SQLE-202ENST00000518604 GPC1P35052 558 aa8.24□□□□□ -1.09
SQLE-202ENST00000518604 SMTNP53814 917 aa8.24□□□□□ -1.09
SQLE-202ENST00000518604 MTFR1Q15390 333 aa8.24□□□□□ -1.09
SQLE-202ENST00000518604 TSEN2Q8NCE0 465 aaKnown RBP8.24□□□□□ -1.09
SQLE-202ENST00000518604 AGBL1Q96MI9 1066 aa8.24□□□□□ -1.09
SQLE-202ENST00000518604 NLRP3Q96P20 1036 aa8.24□□□□□ -1.09
SQLE-202ENST00000518604 HRH3Q9Y5N1 445 aa8.24□□□□□ -1.09
SQLE-202ENST00000518604 CARNS1A5YM72 827 aa8.23□□□□□ -1.09
SQLE-202ENST00000518604 A6NJY4 79 aa8.23□□□□□ -1.09
SQLE-202ENST00000518604 SSFA2P28290 1259 aa8.23□□□□□ -1.09
SQLE-202ENST00000518604 RELBQ01201 579 aa8.23□□□□□ -1.09
SQLE-202ENST00000518604 KCNA1Q09470 495 aa8.23□□□□□ -1.09
SQLE-202ENST00000518604 CRIPAKQ8N1N5 446 aa8.23□□□□□ -1.09
SQLE-202ENST00000518604 C1orf216Q8TAB5 229 aa8.23□□□□□ -1.09
SQLE-202ENST00000518604 SERTAD1Q9UHV2 236 aa8.23□□□□□ -1.09
SQLE-202ENST00000518604 CDK2AP1O14519 115 aa8.22□□□□□ -1.09
SQLE-202ENST00000518604 SPINT1O43278 529 aa8.22□□□□□ -1.09
SQLE-202ENST00000518604 STAU1O95793 577 aaKnown RBP8.22□□□□□ -1.09
SQLE-202ENST00000518604 IGFBP4P22692 258 aa8.22□□□□□ -1.09
SQLE-202ENST00000518604 ATP2B4P23634 1241 aa8.22□□□□□ -1.09
SQLE-202ENST00000518604 WEE1P30291 646 aa8.22□□□□□ -1.09
SQLE-202ENST00000518604 EPHA4P54764 986 aa8.22□□□□□ -1.09
SQLE-202ENST00000518604 CENPCQ03188 943 aa8.22□□□□□ -1.09
SQLE-202ENST00000518604 LINC00528Q8N1L1 170 aa8.22□□□□□ -1.09
SQLE-202ENST00000518604 RAB6BQ9NRW1 208 aa8.22□□□□□ -1.09
SQLE-202ENST00000518604 MEN1O00255 615 aa8.21□□□□□ -1.1
SQLE-202ENST00000518604 FOXK2Q01167 660 aa8.21□□□□□ -1.1
SQLE-202ENST00000518604 OCLNQ16625 522 aa8.21□□□□□ -1.1
SQLE-202ENST00000518604 TNS4Q8IZW8 715 aa8.21□□□□□ -1.1
SQLE-202ENST00000518604 NBPF15Q8N660 670 aa8.21□□□□□ -1.1
SQLE-202ENST00000518604 ZNF395Q9H8N7 513 aaPredicted RBP8.21□□□□□ -1.1
SQLE-202ENST00000518604 CXXC1Q9P0U4 656 aaPredicted RBP8.21□□□□□ -1.1
SQLE-202ENST00000518604 SCHIP1Q9P0W5 487 aaPredicted RBP8.21□□□□□ -1.1
SQLE-202ENST00000518604 ZBTB7CA1YPR0 619 aa8.2□□□□□ -1.1
SQLE-202ENST00000518604 RNF144AP50876 292 aaPredicted RBP8.2□□□□□ -1.1
SQLE-202ENST00000518604 SCARF1Q14162 830 aa8.2□□□□□ -1.1
SQLE-202ENST00000518604 TLR1Q15399 786 aa8.2□□□□□ -1.1
SQLE-202ENST00000518604 MRPL14Q6P1L8 145 aaKnown RBP8.2□□□□□ -1.1
SQLE-202ENST00000518604 STAG2Q8N3U4 1231 aa8.2□□□□□ -1.1
SQLE-202ENST00000518604 FHDC1Q9C0D6 1143 aaPredicted RBP8.2□□□□□ -1.1
SQLE-202ENST00000518604 SLAIN2Q9P270 581 aa8.2□□□□□ -1.1
SQLE-202ENST00000518604 ATAD2Q6PL18 1390 aa8.2□□□□□ -1.1
SQLE-202ENST00000518604 AXIN1O15169 862 aa8.19□□□□□ -1.1
SQLE-202ENST00000518604 FOXO3O43524 673 aa8.19□□□□□ -1.1
SQLE-202ENST00000518604 PRMT3O60678 531 aa8.19□□□□□ -1.1
SQLE-202ENST00000518604 GTF2E1P29083 439 aaPredicted RBP8.19□□□□□ -1.1
SQLE-202ENST00000518604 ARID4AP29374 1257 aaPredicted RBP8.19□□□□□ -1.1
SQLE-202ENST00000518604 PHLDB3Q6NSJ2 640 aa8.19□□□□□ -1.1
SQLE-202ENST00000518604 TAS1R3Q7RTX0 852 aa8.19□□□□□ -1.1
SQLE-202ENST00000518604 AEBP1Q8IUX7 1158 aa8.19□□□□□ -1.1
SQLE-202ENST00000518604 MTMR7Q9Y216 660 aa8.19□□□□□ -1.1
SQLE-202ENST00000518604 BMP2P12643 396 aa8.18□□□□□ -1.1
SQLE-202ENST00000518604 PPARGC1BQ86YN6 1023 aaKnown RBP8.18□□□□□ -1.1
SQLE-202ENST00000518604 COL26A1Q96A83 441 aa8.18□□□□□ -1.1
SQLE-202ENST00000518604 PRIMPOLQ96LW4 560 aa8.18□□□□□ -1.1
SQLE-202ENST00000518604 ZSCAN10Q96SZ4 725 aaPredicted RBP8.18□□□□□ -1.1
SQLE-202ENST00000518604 GRIP2Q9C0E4 1043 aa8.18□□□□□ -1.1
SQLE-202ENST00000518604 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.18□□□□□ -1.1
SQLE-202ENST00000518604 IQSEC3Q9UPP2 1182 aaPredicted RBP8.18□□□□□ -1.1
SQLE-202ENST00000518604 GNEQ9Y223 722 aaKnown RBP8.18□□□□□ -1.1
SQLE-202ENST00000518604 PTCD1O75127 700 aaKnown RBP8.17□□□□□ -1.1
SQLE-202ENST00000518604 PSMA6P60900 246 aaKnown RBP8.17□□□□□ -1.1
SQLE-202ENST00000518604 SLC9A9Q8IVB4 645 aa8.17□□□□□ -1.1
SQLE-202ENST00000518604 CCER1Q8TC90 406 aaPredicted RBP8.17□□□□□ -1.1
SQLE-202ENST00000518604 SCG3Q8WXD2 468 aaKnown RBP8.17□□□□□ -1.1
SQLE-202ENST00000518604 INSM2Q96T92 566 aaPredicted RBP8.17□□□□□ -1.1
SQLE-202ENST00000518604 TSPAN10Q9H1Z9 355 aaPredicted RBP8.17□□□□□ -1.1
SQLE-202ENST00000518604 CHMP3Q9Y3E7 222 aa8.17□□□□□ -1.1
SQLE-202ENST00000518604 C21orf2O43822 256 aa8.16□□□□□ -1.1
SQLE-202ENST00000518604 PPP1R12BO60237 982 aaPredicted RBP8.16□□□□□ -1.1
SQLE-202ENST00000518604 TEAD4Q15561 434 aa8.16□□□□□ -1.1
SQLE-202ENST00000518604 SLC27A3Q5K4L6 730 aa8.16□□□□□ -1.1
SQLE-202ENST00000518604 TMEM214Q6NUQ4 689 aaKnown RBP8.16□□□□□ -1.1
SQLE-202ENST00000518604 NIFKQ9BYG3 293 aaKnown RBP8.16□□□□□ -1.1
SQLE-202ENST00000518604 POLMQ9NP87 494 aaPredicted RBP8.16□□□□□ -1.1
SQLE-202ENST00000518604 WDR44Q5JSH3 913 aa8.15□□□□□ -1.1
SQLE-202ENST00000518604 GNASQ5JWF2 1037 aa8.15□□□□□ -1.1
SQLE-202ENST00000518604 POTEAQ6S8J7 498 aa8.15□□□□□ -1.1
SQLE-202ENST00000518604 TXNDC2Q86VQ3 553 aa8.15□□□□□ -1.1
SQLE-202ENST00000518604 RHBDD1Q8TEB9 315 aa8.15□□□□□ -1.1
SQLE-202ENST00000518604 SPATA31C2B4DYI2 1134 aa8.14□□□□□ -1.11
SQLE-202ENST00000518604 CTSOP43234 321 aaPredicted RBP8.14□□□□□ -1.11
SQLE-202ENST00000518604 HIRAP54198 1017 aaPredicted RBP8.14□□□□□ -1.11
SQLE-202ENST00000518604 C6orf118Q5T5N4 469 aa8.14□□□□□ -1.11
SQLE-202ENST00000518604 FOXD4L5Q5VV16 416 aaPredicted RBP8.14□□□□□ -1.11
SQLE-202ENST00000518604 TRIM46Q7Z4K8 759 aa8.14□□□□□ -1.11
SQLE-202ENST00000518604 ZNF295-AS1Q8N0V1 137 aa8.14□□□□□ -1.11
SQLE-202ENST00000518604 VTI1AQ96AJ9 217 aa8.14□□□□□ -1.11
SQLE-202ENST00000518604 C2orf49Q9BVC5 232 aaPredicted RBP8.14□□□□□ -1.11
SQLE-202ENST00000518604 AAASQ9NRG9 546 aa8.14□□□□□ -1.11
SQLE-202ENST00000518604 SERTM1A2A2V5 107 aa8.13□□□□□ -1.11
SQLE-202ENST00000518604 TTLL8A6PVC2 850 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms