RNA–Protein interactions for RNA: ENST00000518321.5

TVP23C-205, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23C, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-205ENST00000518321 MORC1Q86VD1 984 aa19.15■□□□□ 0.66
TVP23C-205ENST00000518321 LINC00116Q8NCU8 138 aa19.15■□□□□ 0.66
TVP23C-205ENST00000518321 PLEKHO1Q53GL0 409 aaPredicted RBP19.14■□□□□ 0.65
TVP23C-205ENST00000518321 AMIGO3Q86WK7 504 aa19.14■□□□□ 0.65
TVP23C-205ENST00000518321 ATG3Q9NT62 314 aa19.14■□□□□ 0.65
TVP23C-205ENST00000518321 ERVV-2B6SEH9 535 aa19.13■□□□□ 0.65
TVP23C-205ENST00000518321 YBX3P16989 372 aaKnown RBP eCLIP19.13■□□□□ 0.65
TVP23C-205ENST00000518321 ITPK1Q13572 414 aa19.13■□□□□ 0.65
TVP23C-205ENST00000518321 DCAF5Q96JK2 942 aa19.13■□□□□ 0.65
TVP23C-205ENST00000518321 KNSTRNQ9Y448 316 aa19.13■□□□□ 0.65
TVP23C-205ENST00000518321 GNPATO15228 680 aa19.12■□□□□ 0.65
TVP23C-205ENST00000518321 AMOTQ4VCS5 1084 aa19.12■□□□□ 0.65
TVP23C-205ENST00000518321 SMIM5Q71RC9 77 aa19.12■□□□□ 0.65
TVP23C-205ENST00000518321 ZNF530Q6P9A1 599 aaPredicted RBP19.1■□□□□ 0.65
TVP23C-205ENST00000518321 RBM42Q9BTD8 480 aaKnown RBP19.09■□□□□ 0.65
TVP23C-205ENST00000518321 KDRP35968 1356 aa19.08■□□□□ 0.65
TVP23C-205ENST00000518321 CABP4P57796 275 aa19.08■□□□□ 0.64
TVP23C-205ENST00000518321 C1QTNF8P60827 252 aa19.08■□□□□ 0.64
TVP23C-205ENST00000518321 C1orf141Q5JVX7 400 aa19.08■□□□□ 0.64
TVP23C-205ENST00000518321 AEBP1Q8IUX7 1158 aa19.07■□□□□ 0.64
TVP23C-205ENST00000518321 RTCBQ9Y3I0 505 aaKnown RBP19.07■□□□□ 0.64
TVP23C-205ENST00000518321 ZNF831Q5JPB2 1677 aa19.07■□□□□ 0.64
TVP23C-205ENST00000518321 KDM6AO15550 1401 aaPredicted RBP19.07■□□□□ 0.64
TVP23C-205ENST00000518321 MTHFSP49914 203 aa19.06■□□□□ 0.64
TVP23C-205ENST00000518321 SULT6B1Q6IMI4 303 aa19.06■□□□□ 0.64
TVP23C-205ENST00000518321 GIGYF1O75420 1035 aaPredicted RBP19.05■□□□□ 0.64
TVP23C-205ENST00000518321 TRAPPC3LQ5T215 181 aa19.05■□□□□ 0.64
TVP23C-205ENST00000518321 RC3H1Q5TC82 1133 aaKnown RBP19.05■□□□□ 0.64
TVP23C-205ENST00000518321 SLC4A9Q96Q91 983 aa19.05■□□□□ 0.64
TVP23C-205ENST00000518321 AMER1Q5JTC6 1135 aaPredicted RBP19.04■□□□□ 0.64
TVP23C-205ENST00000518321 IL13P35225 146 aa19.03■□□□□ 0.64
TVP23C-205ENST00000518321 KIF7Q2M1P5 1343 aa19.02■□□□□ 0.64
TVP23C-205ENST00000518321 CNTNAP4Q9C0A0 1308 aa19.02■□□□□ 0.64
TVP23C-205ENST00000518321 MMP10P09238 476 aa19.02■□□□□ 0.64
TVP23C-205ENST00000518321 NLGN1Q8N2Q7 840 aa19.02■□□□□ 0.64
TVP23C-205ENST00000518321 COL5A3P25940 1745 aaPredicted RBP19.02■□□□□ 0.63
TVP23C-205ENST00000518321 SENP3-EIF4A1A0A087X0R7 540 aa19.01■□□□□ 0.63
TVP23C-205ENST00000518321 RPS6KA4O75676 772 aa19.01■□□□□ 0.63
TVP23C-205ENST00000518321 NFATC2IPQ8NCF5 419 aa19.01■□□□□ 0.63
TVP23C-205ENST00000518321 PTCD1O75127 700 aaKnown RBP19■□□□□ 0.63
TVP23C-205ENST00000518321 RFC4P35249 363 aa19■□□□□ 0.63
TVP23C-205ENST00000518321 ARHGEF1Q92888 912 aaKnown RBP19■□□□□ 0.63
TVP23C-205ENST00000518321 WWC3Q9ULE0 1092 aa18.99■□□□□ 0.63
TVP23C-205ENST00000518321 ATP10DQ9P241 1426 aa18.99■□□□□ 0.63
TVP23C-205ENST00000518321 AKAP4Q5JQC9 854 aa18.98■□□□□ 0.63
TVP23C-205ENST00000518321 SCN11AQ9UI33 1791 aa18.97■□□□□ 0.63
TVP23C-205ENST00000518321 GYS1P13807 737 aa18.97■□□□□ 0.63
TVP23C-205ENST00000518321 CICQ96RK0 1608 aaPredicted RBP18.96■□□□□ 0.63
TVP23C-205ENST00000518321 KIF13BQ9NQT8 1826 aa18.96■□□□□ 0.63
TVP23C-205ENST00000518321 MYH14Q7Z406 1995 aaKnown RBP18.96■□□□□ 0.63
TVP23C-205ENST00000518321 PER1O15534 1290 aaPredicted RBP18.96■□□□□ 0.63
TVP23C-205ENST00000518321 TGFB2P61812 414 aa18.96■□□□□ 0.63
TVP23C-205ENST00000518321 CCDC87Q9NVE4 849 aa18.96■□□□□ 0.63
TVP23C-205ENST00000518321 CRKLP46109 303 aaKnown RBP18.95■□□□□ 0.62
TVP23C-205ENST00000518321 GPBP1L1Q9HC44 474 aaPredicted RBP18.95■□□□□ 0.62
TVP23C-205ENST00000518321 PARP3Q9Y6F1 533 aa18.95■□□□□ 0.62
TVP23C-205ENST00000518321 ADCY9O60503 1353 aa18.94■□□□□ 0.62
TVP23C-205ENST00000518321 HMOX1P09601 288 aa18.94■□□□□ 0.62
TVP23C-205ENST00000518321 CC2D1BQ5T0F9 858 aaKnown RBP18.94■□□□□ 0.62
TVP23C-205ENST00000518321 SLC52A2Q9HAB3 445 aa18.94■□□□□ 0.62
TVP23C-205ENST00000518321 PXDNLA1KZ92 1463 aa18.94■□□□□ 0.62
TVP23C-205ENST00000518321 C4AP0C0L4 1744 aa18.94■□□□□ 0.62
TVP23C-205ENST00000518321 C10orf71Q711Q0 1435 aa18.93■□□□□ 0.62
TVP23C-205ENST00000518321 DIAPH1O60610 1272 aaKnown RBP18.93■□□□□ 0.62
TVP23C-205ENST00000518321 TJP1Q07157 1748 aa18.93■□□□□ 0.62
TVP23C-205ENST00000518321 LGR6Q9HBX8 967 aa18.92■□□□□ 0.62
TVP23C-205ENST00000518321 N4BP2Q86UW6 1770 aaPredicted RBP18.91■□□□□ 0.62
TVP23C-205ENST00000518321 A0A0G2JLW4 131 aa18.91■□□□□ 0.62
TVP23C-205ENST00000518321 RNMTO43148 476 aaKnown RBP18.91■□□□□ 0.62
TVP23C-205ENST00000518321 USP42Q9H9J4 1324 aaKnown RBP18.91■□□□□ 0.62
TVP23C-205ENST00000518321 KIAA1551Q9HCM1 1747 aa18.91■□□□□ 0.62
TVP23C-205ENST00000518321 INTS5Q6P9B9 1019 aaKnown RBP18.9■□□□□ 0.62
TVP23C-205ENST00000518321 ZNF526Q8TF50 670 aaPredicted RBP18.9■□□□□ 0.62
TVP23C-205ENST00000518321 SRP68Q9UHB9 627 aaKnown RBP18.9■□□□□ 0.62
TVP23C-205ENST00000518321 BCS1LQ9Y276 419 aa18.9■□□□□ 0.62
TVP23C-205ENST00000518321 MRC1P22897 1456 aa18.9■□□□□ 0.62
TVP23C-205ENST00000518321 MTHFSDQ2M296 383 aaKnown RBP18.89■□□□□ 0.61
TVP23C-205ENST00000518321 DNAJC10Q8IXB1 793 aa18.89■□□□□ 0.61
TVP23C-205ENST00000518321 NPC1L1Q9UHC9 1359 aa18.89■□□□□ 0.61
TVP23C-205ENST00000518321 DPEP1P16444 411 aa18.88■□□□□ 0.61
TVP23C-205ENST00000518321 FKBP8Q14318 412 aa18.88■□□□□ 0.61
TVP23C-205ENST00000518321 VIRMAQ69YN4 1812 aaKnown RBP18.88■□□□□ 0.61
TVP23C-205ENST00000518321 SLC39A6Q13433 755 aa18.87■□□□□ 0.61
TVP23C-205ENST00000518321 ZPR1O75312 459 aa18.86■□□□□ 0.61
TVP23C-205ENST00000518321 FCHSD2O94868 740 aa18.86■□□□□ 0.61
TVP23C-205ENST00000518321 CNGB1Q14028 1251 aaPredicted RBP18.86■□□□□ 0.61
TVP23C-205ENST00000518321 ADAMTS7Q9UKP4 1686 aa18.85■□□□□ 0.61
TVP23C-205ENST00000518321 SOS1Q07889 1333 aaPredicted RBP18.85■□□□□ 0.61
TVP23C-205ENST00000518321 U2SURPO15042 1029 aaKnown RBP18.85■□□□□ 0.61
TVP23C-205ENST00000518321 CYP19A1P11511 503 aaPredicted RBP18.85■□□□□ 0.61
TVP23C-205ENST00000518321 ARHGAP27Q6ZUM4 889 aa18.85■□□□□ 0.61
TVP23C-205ENST00000518321 VSIG10Q8N0Z9 540 aa18.85■□□□□ 0.61
TVP23C-205ENST00000518321 KCPQ6ZWJ8 1503 aa18.84■□□□□ 0.61
TVP23C-205ENST00000518321 DDR1Q08345 913 aa18.84■□□□□ 0.61
TVP23C-205ENST00000518321 CNKSR2Q8WXI2 1034 aa18.84■□□□□ 0.61
TVP23C-205ENST00000518321 PIM2Q9P1W9 311 aa18.84■□□□□ 0.61
TVP23C-205ENST00000518321 BRCA1P38398 1863 aaKnown RBP18.84■□□□□ 0.61
TVP23C-205ENST00000518321 COL3A1P02461 1466 aaPredicted RBP18.84■□□□□ 0.61
TVP23C-205ENST00000518321 KCNA3P22001 575 aa18.83■□□□□ 0.6
TVP23C-205ENST00000518321 TM4SF1P30408 202 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms