RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 PCDHB11Q9Y5F2 797 aa7.63□□□□□ -1.19
PABPC1-206ENST00000518293 SCTRP47872 440 aa7.62□□□□□ -1.19
PABPC1-206ENST00000518293 CLN3Q13286 438 aa7.62□□□□□ -1.19
PABPC1-206ENST00000518293 DBN1Q16643 649 aa7.62□□□□□ -1.19
PABPC1-206ENST00000518293 CALR3Q96L12 384 aaKnown RBP7.62□□□□□ -1.19
PABPC1-206ENST00000518293 TRERF1Q96PN7 1200 aa7.62□□□□□ -1.19
PABPC1-206ENST00000518293 DNMT3AQ9Y6K1 912 aaPredicted RBP7.62□□□□□ -1.19
PABPC1-206ENST00000518293 NBPF10Q6P3W6 841 aaKnown RBP7.61□□□□□ -1.19
PABPC1-206ENST00000518293 NBPF15Q8N660 670 aa7.61□□□□□ -1.19
PABPC1-206ENST00000518293 GRIP2Q9C0E4 1043 aa7.61□□□□□ -1.19
PABPC1-206ENST00000518293 ARHGEF10LQ9HCE6 1279 aa7.61□□□□□ -1.19
PABPC1-206ENST00000518293 IGF1RP08069 1367 aa7.6□□□□□ -1.19
PABPC1-206ENST00000518293 TBC1D9Q6ZT07 1266 aa7.6□□□□□ -1.19
PABPC1-206ENST00000518293 ERICH6Q7L0X2 663 aa7.6□□□□□ -1.19
PABPC1-206ENST00000518293 PLPP7Q8NBV4 271 aa7.6□□□□□ -1.19
PABPC1-206ENST00000518293 GTPBP3Q969Y2 492 aaKnown RBP7.6□□□□□ -1.19
PABPC1-206ENST00000518293 OSBPL3Q9H4L5 887 aa7.6□□□□□ -1.19
PABPC1-206ENST00000518293 TIMMDC1Q9NPL8 285 aa7.6□□□□□ -1.19
PABPC1-206ENST00000518293 DOLKQ9UPQ8 538 aa7.6□□□□□ -1.19
PABPC1-206ENST00000518293 SPATA31C2B4DYI2 1134 aa7.59□□□□□ -1.19
PABPC1-206ENST00000518293 SKIP12755 728 aa7.59□□□□□ -1.19
PABPC1-206ENST00000518293 MAP7D1Q3KQU3 841 aa7.59□□□□□ -1.19
PABPC1-206ENST00000518293 WDR44Q5JSH3 913 aa7.59□□□□□ -1.19
PABPC1-206ENST00000518293 GPAT2Q6NUI2 795 aa7.59□□□□□ -1.19
PABPC1-206ENST00000518293 TAS1R3Q7RTX0 852 aa7.59□□□□□ -1.19
PABPC1-206ENST00000518293 NFATC2IPQ8NCF5 419 aa7.59□□□□□ -1.19
PABPC1-206ENST00000518293 NSFL1CQ9UNZ2 370 aaKnown RBP7.59□□□□□ -1.19
PABPC1-206ENST00000518293 ARID3CA6NKF2 412 aa7.58□□□□□ -1.2
PABPC1-206ENST00000518293 WASLO00401 505 aaPredicted RBP7.58□□□□□ -1.2
PABPC1-206ENST00000518293 MYCP01106 439 aaPredicted RBP7.58□□□□□ -1.2
PABPC1-206ENST00000518293 GNRH1P01148 92 aa7.58□□□□□ -1.2
PABPC1-206ENST00000518293 IGHA1P01876 353 aa7.58□□□□□ -1.2
PABPC1-206ENST00000518293 MX2P20592 715 aa7.58□□□□□ -1.2
PABPC1-206ENST00000518293 FOXK2Q01167 660 aa7.58□□□□□ -1.2
PABPC1-206ENST00000518293 NUCKS1Q9H1E3 243 aaKnown RBP7.58□□□□□ -1.2
PABPC1-206ENST00000518293 RAB6BQ9NRW1 208 aa7.58□□□□□ -1.2
PABPC1-206ENST00000518293 PHF20L1A8MW92 1017 aa7.57□□□□□ -1.2
PABPC1-206ENST00000518293 F11P03951 625 aa7.57□□□□□ -1.2
PABPC1-206ENST00000518293 BCRP11274 1271 aa7.57□□□□□ -1.2
PABPC1-206ENST00000518293 OXLD1Q5BKU9 147 aa7.57□□□□□ -1.2
PABPC1-206ENST00000518293 DEPDC4Q8N2C3 294 aa7.57□□□□□ -1.2
PABPC1-206ENST00000518293 NEDD1Q8NHV4 660 aa7.57□□□□□ -1.2
PABPC1-206ENST00000518293 TFIP11Q9UBB9 837 aaKnown RBP7.57□□□□□ -1.2
PABPC1-206ENST00000518293 PALM3A6NDB9 673 aaPredicted RBP7.56□□□□□ -1.2
PABPC1-206ENST00000518293 USP17L5A8MUK1 530 aa7.56□□□□□ -1.2
PABPC1-206ENST00000518293 ATP9BO43861 1147 aa7.56□□□□□ -1.2
PABPC1-206ENST00000518293 GTF2E1P29083 439 aaPredicted RBP7.56□□□□□ -1.2
PABPC1-206ENST00000518293 USP4Q13107 963 aa7.56□□□□□ -1.2
PABPC1-206ENST00000518293 PODNQ7Z5L7 613 aa7.56□□□□□ -1.2
PABPC1-206ENST00000518293 CNKSR1Q969H4 720 aa7.56□□□□□ -1.2
PABPC1-206ENST00000518293 ESYT1Q9BSJ8 1104 aa7.56□□□□□ -1.2
PABPC1-206ENST00000518293 PPP1R12CQ9BZL4 782 aa7.56□□□□□ -1.2
PABPC1-206ENST00000518293 C1orf115Q9H7X2 142 aa7.56□□□□□ -1.2
PABPC1-206ENST00000518293 CENPCQ03188 943 aa7.55□□□□□ -1.2
PABPC1-206ENST00000518293 BEND7Q8N7W2 519 aaPredicted RBP7.55□□□□□ -1.2
PABPC1-206ENST00000518293 CNTNAP5Q8WYK1 1306 aa7.54□□□□□ -1.2
PABPC1-206ENST00000518293 IL2RAP01589 272 aa7.54□□□□□ -1.2
PABPC1-206ENST00000518293 NCOA4Q13772 614 aa7.54□□□□□ -1.2
PABPC1-206ENST00000518293 PLEKHM2Q8IWE5 1019 aa7.54□□□□□ -1.2
PABPC1-206ENST00000518293 ACDQ96AP0 544 aa7.54□□□□□ -1.2
PABPC1-206ENST00000518293 ZSCAN10Q96SZ4 725 aaPredicted RBP7.54□□□□□ -1.2
PABPC1-206ENST00000518293 USP17L3A6NCW0 530 aa7.53□□□□□ -1.2
PABPC1-206ENST00000518293 USP17L4A6NCW7 530 aa7.53□□□□□ -1.2
PABPC1-206ENST00000518293 LZTS3O60299 673 aaPredicted RBP7.53□□□□□ -1.2
PABPC1-206ENST00000518293 PHKA2P46019 1235 aa7.53□□□□□ -1.2
PABPC1-206ENST00000518293 EML3Q32P44 896 aa7.53□□□□□ -1.2
PABPC1-206ENST00000518293 USP17L2Q6R6M4 530 aa7.53□□□□□ -1.2
PABPC1-206ENST00000518293 USP17L1Q7RTZ2 530 aa7.53□□□□□ -1.2
PABPC1-206ENST00000518293 GPAMQ9HCL2 828 aa7.53□□□□□ -1.2
PABPC1-206ENST00000518293 LRRC4BQ9NT99 713 aa7.53□□□□□ -1.2
PABPC1-206ENST00000518293 MAFBQ9Y5Q3 323 aaPredicted RBP7.53□□□□□ -1.2
PABPC1-206ENST00000518293 A0A1B0GTH6 734 aa7.52□□□□□ -1.21
PABPC1-206ENST00000518293 MAP2K3P46734 347 aa7.52□□□□□ -1.21
PABPC1-206ENST00000518293 ESCO1Q5FWF5 840 aa7.52□□□□□ -1.21
PABPC1-206ENST00000518293 GNASQ5JWF2 1037 aa7.52□□□□□ -1.21
PABPC1-206ENST00000518293 CFAP70Q5T0N1 1121 aa7.52□□□□□ -1.21
PABPC1-206ENST00000518293 TMEM214Q6NUQ4 689 aaKnown RBP7.52□□□□□ -1.21
PABPC1-206ENST00000518293 SIRT1Q96EB6 747 aa7.52□□□□□ -1.21
PABPC1-206ENST00000518293 PHF24Q9UPV7 400 aa7.52□□□□□ -1.21
PABPC1-206ENST00000518293 PCDHGA11Q9Y5H2 935 aa7.52□□□□□ -1.21
PABPC1-206ENST00000518293 SUPT5HO00267 1087 aaKnown RBP7.51□□□□□ -1.21
PABPC1-206ENST00000518293 STAU1O95793 577 aaKnown RBP7.51□□□□□ -1.21
PABPC1-206ENST00000518293 CSB-PGBD3P0DP91 1061 aa7.51□□□□□ -1.21
PABPC1-206ENST00000518293 LMOD1P29536 600 aaPredicted RBP7.51□□□□□ -1.21
PABPC1-206ENST00000518293 PGBD3Q8N328 593 aa7.51□□□□□ -1.21
PABPC1-206ENST00000518293 XAGE2Q96GT9 111 aa7.51□□□□□ -1.21
PABPC1-206ENST00000518293 CFHR5Q9BXR6 569 aa7.51□□□□□ -1.21
PABPC1-206ENST00000518293 OXCT2Q9BYC2 517 aaPredicted RBP7.51□□□□□ -1.21
PABPC1-206ENST00000518293 NOD1Q9Y239 953 aa7.51□□□□□ -1.21
PABPC1-206ENST00000518293 OIP5O43482 229 aa7.5□□□□□ -1.21
PABPC1-206ENST00000518293 DCAF5Q96JK2 942 aa7.5□□□□□ -1.21
PABPC1-206ENST00000518293 MKRN1Q9UHC7 482 aaKnown RBP7.5□□□□□ -1.21
PABPC1-206ENST00000518293 ZBTB7BO15156 539 aaPredicted RBP7.49□□□□□ -1.21
PABPC1-206ENST00000518293 GTF2IP78347 998 aa7.49□□□□□ -1.21
PABPC1-206ENST00000518293 LBRQ14739 615 aaKnown RBP7.49□□□□□ -1.21
PABPC1-206ENST00000518293 KANK4Q5T7N3 995 aaPredicted RBP7.49□□□□□ -1.21
PABPC1-206ENST00000518293 HRH3Q9Y5N1 445 aa7.49□□□□□ -1.21
PABPC1-206ENST00000518293 MSTNO14793 375 aa7.48□□□□□ -1.21
PABPC1-206ENST00000518293 RFX1P22670 979 aa7.48□□□□□ -1.21
PABPC1-206ENST00000518293 SCNN1DP51172 638 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms