RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 CDCA8Q53HL2 280 aa15.99■□□□□ 0.15
TRAPPC9-203ENST00000517667 SMIM5Q71RC9 77 aa15.99■□□□□ 0.15
TRAPPC9-203ENST00000517667 C10orf71Q711Q0 1435 aa15.99■□□□□ 0.15
TRAPPC9-203ENST00000517667 PLEKHG2Q9H7P9 1386 aa15.99■□□□□ 0.15
TRAPPC9-203ENST00000517667 C4AP0C0L4 1744 aa15.98■□□□□ 0.15
TRAPPC9-203ENST00000517667 COL5A3P25940 1745 aaPredicted RBP15.98■□□□□ 0.15
TRAPPC9-203ENST00000517667 ARFGEF1Q9Y6D6 1849 aa15.98■□□□□ 0.15
TRAPPC9-203ENST00000517667 ITPK1Q13572 414 aa15.97■□□□□ 0.15
TRAPPC9-203ENST00000517667 NLGN1Q8N2Q7 840 aa15.97■□□□□ 0.15
TRAPPC9-203ENST00000517667 BCS1LQ9Y276 419 aa15.97■□□□□ 0.15
TRAPPC9-203ENST00000517667 EMILIN1Q9Y6C2 1016 aa15.97■□□□□ 0.15
TRAPPC9-203ENST00000517667 TRAPPC3LQ5T215 181 aa15.96■□□□□ 0.15
TRAPPC9-203ENST00000517667 IFNL2Q8IZJ0 200 aa15.96■□□□□ 0.15
TRAPPC9-203ENST00000517667 ASAP1Q9ULH1 1129 aa15.96■□□□□ 0.15
TRAPPC9-203ENST00000517667 RTCBQ9Y3I0 505 aaKnown RBP15.96■□□□□ 0.15
TRAPPC9-203ENST00000517667 ADRA2BP18089 450 aa15.95■□□□□ 0.14
TRAPPC9-203ENST00000517667 DNAJC5GQ8N7S2 189 aa15.95■□□□□ 0.14
TRAPPC9-203ENST00000517667 CCDC87Q9NVE4 849 aa15.95■□□□□ 0.14
TRAPPC9-203ENST00000517667 KDRP35968 1356 aa15.95■□□□□ 0.14
TRAPPC9-203ENST00000517667 WASHC2AQ641Q2 1341 aa15.94■□□□□ 0.14
TRAPPC9-203ENST00000517667 PHKG2P15735 406 aa15.94■□□□□ 0.14
TRAPPC9-203ENST00000517667 PPM1GO15355 546 aaPredicted RBP15.93■□□□□ 0.14
TRAPPC9-203ENST00000517667 ARHGAP27Q6ZUM4 889 aa15.93■□□□□ 0.14
TRAPPC9-203ENST00000517667 C16orf71Q8IYS4 520 aaPredicted RBP15.93■□□□□ 0.14
TRAPPC9-203ENST00000517667 RBM46Q8TBY0 533 aaKnown RBP15.93■□□□□ 0.14
TRAPPC9-203ENST00000517667 TNRC6CQ9HCJ0 1690 aaKnown RBP15.92■□□□□ 0.14
TRAPPC9-203ENST00000517667 A0A0G2JLW4 131 aa15.92■□□□□ 0.14
TRAPPC9-203ENST00000517667 EYA1Q99502 592 aa15.92■□□□□ 0.14
TRAPPC9-203ENST00000517667 NMRK2Q9NPI5 230 aa15.92■□□□□ 0.14
TRAPPC9-203ENST00000517667 ATG3Q9NT62 314 aa15.92■□□□□ 0.14
TRAPPC9-203ENST00000517667 PARP3Q9Y6F1 533 aa15.92■□□□□ 0.14
TRAPPC9-203ENST00000517667 FCHSD2O94868 740 aa15.91■□□□□ 0.14
TRAPPC9-203ENST00000517667 RC3H1Q5TC82 1133 aaKnown RBP15.91■□□□□ 0.14
TRAPPC9-203ENST00000517667 CNTNAP4Q9C0A0 1308 aa15.91■□□□□ 0.14
TRAPPC9-203ENST00000517667 DPEP1P16444 411 aa15.9■□□□□ 0.14
TRAPPC9-203ENST00000517667 RFC4P35249 363 aa15.9■□□□□ 0.14
TRAPPC9-203ENST00000517667 FSTL1Q12841 308 aa15.9■□□□□ 0.14
TRAPPC9-203ENST00000517667 KDM2BQ8NHM5 1336 aa15.9■□□□□ 0.14
TRAPPC9-203ENST00000517667 ERVV-2B6SEH9 535 aa15.89■□□□□ 0.13
TRAPPC9-203ENST00000517667 HSP90AB1P08238 724 aaKnown RBP15.89■□□□□ 0.13
TRAPPC9-203ENST00000517667 GYS1P13807 737 aa15.89■□□□□ 0.13
TRAPPC9-203ENST00000517667 ARHGEF1Q92888 912 aaKnown RBP15.89■□□□□ 0.13
TRAPPC9-203ENST00000517667 KLRG1Q96E93 195 aa15.89■□□□□ 0.13
TRAPPC9-203ENST00000517667 CARD14Q9BXL6 1004 aa15.89■□□□□ 0.13
TRAPPC9-203ENST00000517667 RPS6KA4O75676 772 aa15.88■□□□□ 0.13
TRAPPC9-203ENST00000517667 C9orf131Q5VYM1 1079 aa15.88■□□□□ 0.13
TRAPPC9-203ENST00000517667 DCAF5Q96JK2 942 aa15.88■□□□□ 0.13
TRAPPC9-203ENST00000517667 RBM42Q9BTD8 480 aaKnown RBP15.88■□□□□ 0.13
TRAPPC9-203ENST00000517667 PIM2Q9P1W9 311 aa15.88■□□□□ 0.13
TRAPPC9-203ENST00000517667 MYH14Q7Z406 1995 aaKnown RBP15.87■□□□□ 0.13
TRAPPC9-203ENST00000517667 JMYQ8N9B5 988 aa15.87■□□□□ 0.13
TRAPPC9-203ENST00000517667 KCPQ6ZWJ8 1503 aa15.87■□□□□ 0.13
TRAPPC9-203ENST00000517667 DALRD3Q5D0E6 543 aaKnown RBP15.86■□□□□ 0.13
TRAPPC9-203ENST00000517667 SLC4A9Q96Q91 983 aa15.86■□□□□ 0.13
TRAPPC9-203ENST00000517667 SBF1O95248 1867 aa15.86■□□□□ 0.13
TRAPPC9-203ENST00000517667 KCNA3P22001 575 aa15.85■□□□□ 0.13
TRAPPC9-203ENST00000517667 POLKQ9UBT6 870 aa15.85■□□□□ 0.13
TRAPPC9-203ENST00000517667 PCNTO95613 3336 aa15.84■□□□□ 0.13
TRAPPC9-203ENST00000517667 EIF4A2Q14240 407 aaKnown RBP15.84■□□□□ 0.13
TRAPPC9-203ENST00000517667 RNF181Q9P0P0 153 aa15.84■□□□□ 0.13
TRAPPC9-203ENST00000517667 TJP1Q07157 1748 aa15.84■□□□□ 0.13
TRAPPC9-203ENST00000517667 CABP4P57796 275 aa15.83■□□□□ 0.12
TRAPPC9-203ENST00000517667 ZC3H4Q9UPT8 1303 aaKnown RBP15.83■□□□□ 0.12
TRAPPC9-203ENST00000517667 KDM6AO15550 1401 aaPredicted RBP15.83■□□□□ 0.12
TRAPPC9-203ENST00000517667 AMOTQ4VCS5 1084 aa15.82■□□□□ 0.12
TRAPPC9-203ENST00000517667 PLEKHO1Q53GL0 409 aaPredicted RBP15.82■□□□□ 0.12
TRAPPC9-203ENST00000517667 SMC1BQ8NDV3 1235 aa15.82■□□□□ 0.12
TRAPPC9-203ENST00000517667 HTRA3P83110 453 aa15.81■□□□□ 0.12
TRAPPC9-203ENST00000517667 COL13A1Q5TAT6 717 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC9-203ENST00000517667 USP42Q9H9J4 1324 aaKnown RBP15.81■□□□□ 0.12
TRAPPC9-203ENST00000517667 DLEC1Q9Y238 1755 aa15.8■□□□□ 0.12
TRAPPC9-203ENST00000517667 ADAMTS7Q9UKP4 1686 aa15.8■□□□□ 0.12
TRAPPC9-203ENST00000517667 CRKLP46109 303 aaKnown RBP15.8■□□□□ 0.12
TRAPPC9-203ENST00000517667 ZNF530Q6P9A1 599 aaPredicted RBP15.8■□□□□ 0.12
TRAPPC9-203ENST00000517667 RRAGCQ9HB90 399 aa15.8■□□□□ 0.12
TRAPPC9-203ENST00000517667 FKBP8Q14318 412 aa15.79■□□□□ 0.12
TRAPPC9-203ENST00000517667 SCN11AQ9UI33 1791 aa15.79■□□□□ 0.12
TRAPPC9-203ENST00000517667 TIAM2Q8IVF5 1701 aa15.79■□□□□ 0.12
TRAPPC9-203ENST00000517667 PTCD1O75127 700 aaKnown RBP15.78■□□□□ 0.12
TRAPPC9-203ENST00000517667 MTHFSP49914 203 aa15.78■□□□□ 0.12
TRAPPC9-203ENST00000517667 DDR1Q08345 913 aa15.78■□□□□ 0.12
TRAPPC9-203ENST00000517667 C1orf141Q5JVX7 400 aa15.78■□□□□ 0.12
TRAPPC9-203ENST00000517667 TNS4Q8IZW8 715 aa15.78■□□□□ 0.12
TRAPPC9-203ENST00000517667 SRP68Q9UHB9 627 aaKnown RBP15.78■□□□□ 0.12
TRAPPC9-203ENST00000517667 AFDNP55196 1824 aaKnown RBP15.78■□□□□ 0.12
TRAPPC9-203ENST00000517667 NRXN2Q9P2S2 1712 aa15.77■□□□□ 0.12
TRAPPC9-203ENST00000517667 CHRNA5P30532 468 aa15.77■□□□□ 0.12
TRAPPC9-203ENST00000517667 TNNT2P45379 298 aaPredicted RBP15.77■□□□□ 0.12
TRAPPC9-203ENST00000517667 POLRMTO00411 1230 aaKnown RBP15.76■□□□□ 0.11
TRAPPC9-203ENST00000517667 ZPR1O75312 459 aa15.76■□□□□ 0.11
TRAPPC9-203ENST00000517667 CAPN15O75808 1086 aa15.75■□□□□ 0.11
TRAPPC9-203ENST00000517667 TM4SF1P30408 202 aa15.75■□□□□ 0.11
TRAPPC9-203ENST00000517667 PRELPP51888 382 aa15.75■□□□□ 0.11
TRAPPC9-203ENST00000517667 NFATC2IPQ8NCF5 419 aa15.75■□□□□ 0.11
TRAPPC9-203ENST00000517667 CCDC88AQ3V6T2 1871 aa15.74■□□□□ 0.11
TRAPPC9-203ENST00000517667 VEGFAP15692 232 aaPredicted RBP15.74■□□□□ 0.11
TRAPPC9-203ENST00000517667 LMNB1P20700 586 aa15.74■□□□□ 0.11
TRAPPC9-203ENST00000517667 VIRMAQ69YN4 1812 aaKnown RBP15.73■□□□□ 0.11
TRAPPC9-203ENST00000517667 GLTPD2A6NH11 291 aa15.73■□□□□ 0.11
TRAPPC9-203ENST00000517667 RASSF7Q02833 373 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms